RNA–Protein interactions for RNA: ENST00000558780.5

IPO4-207, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 3,540 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-207ENST00000558780 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
IPO4-207ENST00000558780 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
IPO4-207ENST00000558780 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
IPO4-207ENST00000558780 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
IPO4-207ENST00000558780 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
IPO4-207ENST00000558780 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.85
IPO4-207ENST00000558780 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
IPO4-207ENST00000558780 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
IPO4-207ENST00000558780 PPARGC1BQ86YN6 1023 aaKnown RBP19.73■□□□□ 0.75
IPO4-207ENST00000558780 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
IPO4-207ENST00000558780 HRCP23327 699 aa19.71■□□□□ 0.75
IPO4-207ENST00000558780 ABCC9O60706 1549 aa19.68■□□□□ 0.74
IPO4-207ENST00000558780 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
IPO4-207ENST00000558780 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
IPO4-207ENST00000558780 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
IPO4-207ENST00000558780 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
IPO4-207ENST00000558780 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.71
IPO4-207ENST00000558780 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
IPO4-207ENST00000558780 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
IPO4-207ENST00000558780 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
IPO4-207ENST00000558780 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.66
IPO4-207ENST00000558780 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
IPO4-207ENST00000558780 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
IPO4-207ENST00000558780 NACADO15069 1562 aa19.04■□□□□ 0.64
IPO4-207ENST00000558780 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■■■□□ 18.5
IPO4-207ENST00000558780 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
IPO4-207ENST00000558780 WIZO95785 1651 aa18.93■□□□□ 0.62
IPO4-207ENST00000558780 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
IPO4-207ENST00000558780 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
IPO4-207ENST00000558780 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
IPO4-207ENST00000558780 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
IPO4-207ENST00000558780 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.57
IPO4-207ENST00000558780 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
IPO4-207ENST00000558780 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
IPO4-207ENST00000558780 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
IPO4-207ENST00000558780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
IPO4-207ENST00000558780 SOGA1O94964 1423 aa18.48■□□□□ 0.55
IPO4-207ENST00000558780 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
IPO4-207ENST00000558780 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
IPO4-207ENST00000558780 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
IPO4-207ENST00000558780 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
IPO4-207ENST00000558780 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
IPO4-207ENST00000558780 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
IPO4-207ENST00000558780 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
IPO4-207ENST00000558780 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
IPO4-207ENST00000558780 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
IPO4-207ENST00000558780 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.53
IPO4-207ENST00000558780 EIF4G1Q04637 1599 aaKnown RBP18.31■□□□□ 0.52
IPO4-207ENST00000558780 ACIN1Q9UKV3 1341 aaKnown RBP18.29■□□□□ 0.52
IPO4-207ENST00000558780 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
IPO4-207ENST00000558780 MYT1Q01538 1121 aa18.26■□□□□ 0.51
IPO4-207ENST00000558780 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
IPO4-207ENST00000558780 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
IPO4-207ENST00000558780 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
IPO4-207ENST00000558780 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
IPO4-207ENST00000558780 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
IPO4-207ENST00000558780 YTHDC1Q96MU7 727 aaKnown RBP18.11■□□□□ 0.49
IPO4-207ENST00000558780 APLP2Q06481 763 aa18.07■□□□□ 0.48
IPO4-207ENST00000558780 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
IPO4-207ENST00000558780 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
IPO4-207ENST00000558780 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
IPO4-207ENST00000558780 EEA1Q15075 1411 aa18■□□□□ 0.47
IPO4-207ENST00000558780 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
IPO4-207ENST00000558780 CLIP1P30622 1438 aa17.98■□□□□ 0.47
IPO4-207ENST00000558780 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
IPO4-207ENST00000558780 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
IPO4-207ENST00000558780 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
IPO4-207ENST00000558780 ITGAEP38570 1179 aa17.86■□□□□ 0.45
IPO4-207ENST00000558780 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
IPO4-207ENST00000558780 KANK4Q5T7N3 995 aaPredicted RBP17.78■□□□□ 0.44
IPO4-207ENST00000558780 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
IPO4-207ENST00000558780 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
IPO4-207ENST00000558780 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
IPO4-207ENST00000558780 KIF21BO75037 1637 aa17.71■□□□□ 0.43
IPO4-207ENST00000558780 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
IPO4-207ENST00000558780 CUX1P39880 1505 aa17.69■□□□□ 0.42
IPO4-207ENST00000558780 ZNF316A6NFI3 1004 aaPredicted RBP17.68■□□□□ 0.42
IPO4-207ENST00000558780 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
IPO4-207ENST00000558780 CUX2O14529 1486 aa17.62■□□□□ 0.41
IPO4-207ENST00000558780 CFTRP13569 1480 aa17.6■□□□□ 0.41
IPO4-207ENST00000558780 PRXQ9BXM0 1461 aa17.59■□□□□ 0.41
IPO4-207ENST00000558780 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
IPO4-207ENST00000558780 HMGXB3Q12766 1538 aa17.58■□□□□ 0.4
IPO4-207ENST00000558780 MIER1Q8N108 512 aa17.56■□□□□ 0.4
IPO4-207ENST00000558780 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
IPO4-207ENST00000558780 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
IPO4-207ENST00000558780 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
IPO4-207ENST00000558780 IGF1RP08069 1367 aa17.52■□□□□ 0.4
IPO4-207ENST00000558780 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
IPO4-207ENST00000558780 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
IPO4-207ENST00000558780 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
IPO4-207ENST00000558780 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
IPO4-207ENST00000558780 NESP48681 1621 aa17.46■□□□□ 0.39
IPO4-207ENST00000558780 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.38
IPO4-207ENST00000558780 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
IPO4-207ENST00000558780 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
IPO4-207ENST00000558780 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
IPO4-207ENST00000558780 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
IPO4-207ENST00000558780 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.38
IPO4-207ENST00000558780 CCNB3Q8WWL7 1395 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms