RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
COPS2-204ENST00000558545 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
COPS2-204ENST00000558545 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
COPS2-204ENST00000558545 PHF23Q9BUL5 403 aaPredicted RBP25.24■■□□□ 1.63
COPS2-204ENST00000558545 FOXD1Q16676 465 aa23.47■■□□□ 1.35
COPS2-204ENST00000558545 PLPPR3Q6T4P5 718 aa23.23■■□□□ 1.31
COPS2-204ENST00000558545 PPP6R1Q9UPN7 881 aa22.34■■□□□ 1.17
COPS2-204ENST00000558545 ADRA2BP18089 450 aa22.28■■□□□ 1.16
COPS2-204ENST00000558545 PIAS4Q8N2W9 510 aaPredicted RBP22.05■■□□□ 1.12
COPS2-204ENST00000558545 MSH5O43196 834 aa21.81■■□□□ 1.08
COPS2-204ENST00000558545 POTEDQ86YR6 584 aa20.89■□□□□ 0.93
COPS2-204ENST00000558545 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
COPS2-204ENST00000558545 PPP4R3CPQ6ZMV5 832 aa20.41■□□□□ 0.86
COPS2-204ENST00000558545 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
COPS2-204ENST00000558545 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
COPS2-204ENST00000558545 CNKSR2Q8WXI2 1034 aa19.93■□□□□ 0.78
COPS2-204ENST00000558545 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
COPS2-204ENST00000558545 HOXD11P31277 338 aaPredicted RBP19.64■□□□□ 0.73
COPS2-204ENST00000558545 RNF216Q9NWF9 866 aaPredicted RBP19.63■□□□□ 0.73
COPS2-204ENST00000558545 KCNA4P22459 653 aa19.58■□□□□ 0.72
COPS2-204ENST00000558545 NPM3O75607 178 aaKnown RBP19.5■□□□□ 0.71
COPS2-204ENST00000558545 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
COPS2-204ENST00000558545 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
COPS2-204ENST00000558545 RNF39Q9H2S5 420 aa18.65■□□□□ 0.58
COPS2-204ENST00000558545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.576e-6■□□□□ 8.3
COPS2-204ENST00000558545 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
COPS2-204ENST00000558545 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
COPS2-204ENST00000558545 C1QBPQ07021 282 aaKnown RBP18.43■□□□□ 0.54
COPS2-204ENST00000558545 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
COPS2-204ENST00000558545 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
COPS2-204ENST00000558545 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
COPS2-204ENST00000558545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
COPS2-204ENST00000558545 MYCNP04198 464 aaPredicted RBP18.05■□□□□ 0.48
COPS2-204ENST00000558545 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
COPS2-204ENST00000558545 ZBTB22O15209 634 aa18.01■□□□□ 0.47
COPS2-204ENST00000558545 SAMD1Q6SPF0 538 aaPredicted RBP17.96■□□□□ 0.47
COPS2-204ENST00000558545 APLP2Q06481 763 aa17.93■□□□□ 0.46
COPS2-204ENST00000558545 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
COPS2-204ENST00000558545 CAPN15O75808 1086 aa17.8■□□□□ 0.44
COPS2-204ENST00000558545 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
COPS2-204ENST00000558545 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
COPS2-204ENST00000558545 EHMT2Q96KQ7 1210 aa17.65■□□□□ 0.42
COPS2-204ENST00000558545 DSG3P32926 999 aa17.64■□□□□ 0.41
COPS2-204ENST00000558545 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
COPS2-204ENST00000558545 ATXN8OSP0DMR3 200 aa17.6■□□□□ 0.41
COPS2-204ENST00000558545 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
COPS2-204ENST00000558545 ABCB7O75027 752 aa17.41■□□□□ 0.38
COPS2-204ENST00000558545 POLA2Q14181 598 aa17.31■□□□□ 0.36
COPS2-204ENST00000558545 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
COPS2-204ENST00000558545 FBLN2P98095 1184 aa16.85■□□□□ 0.29
COPS2-204ENST00000558545 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
COPS2-204ENST00000558545 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
COPS2-204ENST00000558545 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
COPS2-204ENST00000558545 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
COPS2-204ENST00000558545 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
COPS2-204ENST00000558545 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
COPS2-204ENST00000558545 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
COPS2-204ENST00000558545 SSUH2Q9Y2M2 353 aa16.43■□□□□ 0.22
COPS2-204ENST00000558545 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
COPS2-204ENST00000558545 POTEHQ6S545 545 aa16.39■□□□□ 0.21
COPS2-204ENST00000558545 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
COPS2-204ENST00000558545 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
COPS2-204ENST00000558545 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
COPS2-204ENST00000558545 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
COPS2-204ENST00000558545 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
COPS2-204ENST00000558545 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
COPS2-204ENST00000558545 PROM2Q8N271 834 aa16.04■□□□□ 0.16
COPS2-204ENST00000558545 CLEC11AQ9Y240 323 aa16■□□□□ 0.15
COPS2-204ENST00000558545 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.15
COPS2-204ENST00000558545 FKBP8Q14318 412 aa15.96■□□□□ 0.15
COPS2-204ENST00000558545 PIP4P2Q8N4L2 257 aa15.95■□□□□ 0.14
COPS2-204ENST00000558545 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
COPS2-204ENST00000558545 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
COPS2-204ENST00000558545 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
COPS2-204ENST00000558545 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
COPS2-204ENST00000558545 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
COPS2-204ENST00000558545 FBXO3Q9UK99 471 aa15.54■□□□□ 0.08
COPS2-204ENST00000558545 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
COPS2-204ENST00000558545 HAX1O00165 279 aa15.46■□□□□ 0.07
COPS2-204ENST00000558545 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
COPS2-204ENST00000558545 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
COPS2-204ENST00000558545 MIER1Q8N108 512 aa15.41■□□□□ 0.06
COPS2-204ENST00000558545 PLEKHG5O94827 1062 aa15.4■□□□□ 0.06
COPS2-204ENST00000558545 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
COPS2-204ENST00000558545 PLCD3Q8N3E9 789 aa15.35■□□□□ 0.05
COPS2-204ENST00000558545 EVX2Q03828 476 aa15.32■□□□□ 0.04
COPS2-204ENST00000558545 VASPP50552 380 aaPredicted RBP15.31■□□□□ 0.04
COPS2-204ENST00000558545 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
COPS2-204ENST00000558545 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
COPS2-204ENST00000558545 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
COPS2-204ENST00000558545 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
COPS2-204ENST00000558545 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
COPS2-204ENST00000558545 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
COPS2-204ENST00000558545 NUBP1P53384 320 aa15.11■□□□□ 0.01
COPS2-204ENST00000558545 CLCN6P51797 869 aa15.1■□□□□ 0.01
COPS2-204ENST00000558545 RASEFQ8IZ41 740 aa15.08■□□□□ 0
COPS2-204ENST00000558545 IFNLR1Q8IU57 520 aaPredicted RBP15.07■□□□□ 0
COPS2-204ENST00000558545 KLHL34Q8N239 644 aa15.05■□□□□ -0
COPS2-204ENST00000558545 GABBR2O75899 941 aa15.04■□□□□ -0
COPS2-204ENST00000558545 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms