RNA–Protein interactions for RNA: ENST00000558429.1

AC009269.3-201, humanhuman

TSL 5 BASIC

Gene AC009269.3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009269.3-201ENST00000558429 AEBP2Q6ZN18 517 aaPredicted RBP24.36■■□□□ 1.49
AC009269.3-201ENST00000558429 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
AC009269.3-201ENST00000558429 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
AC009269.3-201ENST00000558429 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
AC009269.3-201ENST00000558429 FOXD1Q16676 465 aa19.31■□□□□ 0.68
AC009269.3-201ENST00000558429 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
AC009269.3-201ENST00000558429 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
AC009269.3-201ENST00000558429 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
AC009269.3-201ENST00000558429 ADRA2BP18089 450 aa18.19■□□□□ 0.5
AC009269.3-201ENST00000558429 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
AC009269.3-201ENST00000558429 MSH5O43196 834 aa18.04■□□□□ 0.48
AC009269.3-201ENST00000558429 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
AC009269.3-201ENST00000558429 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
AC009269.3-201ENST00000558429 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
AC009269.3-201ENST00000558429 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
AC009269.3-201ENST00000558429 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
AC009269.3-201ENST00000558429 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
AC009269.3-201ENST00000558429 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
AC009269.3-201ENST00000558429 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
AC009269.3-201ENST00000558429 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
AC009269.3-201ENST00000558429 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
AC009269.3-201ENST00000558429 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
AC009269.3-201ENST00000558429 KCNA4P22459 653 aa15.61■□□□□ 0.09
AC009269.3-201ENST00000558429 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
AC009269.3-201ENST00000558429 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
AC009269.3-201ENST00000558429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
AC009269.3-201ENST00000558429 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
AC009269.3-201ENST00000558429 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
AC009269.3-201ENST00000558429 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
AC009269.3-201ENST00000558429 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
AC009269.3-201ENST00000558429 POTEHQ6S545 545 aa14.69□□□□□ -0.06
AC009269.3-201ENST00000558429 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
AC009269.3-201ENST00000558429 CAPN15O75808 1086 aa14.64□□□□□ -0.07
AC009269.3-201ENST00000558429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
AC009269.3-201ENST00000558429 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
AC009269.3-201ENST00000558429 APLP2Q06481 763 aa14.57□□□□□ -0.08
AC009269.3-201ENST00000558429 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
AC009269.3-201ENST00000558429 MYCNP04198 464 aaPredicted RBP14.53□□□□□ -0.08
AC009269.3-201ENST00000558429 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
AC009269.3-201ENST00000558429 DSG3P32926 999 aa14.47□□□□□ -0.09
AC009269.3-201ENST00000558429 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
AC009269.3-201ENST00000558429 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
AC009269.3-201ENST00000558429 ZBTB22O15209 634 aa14.34□□□□□ -0.11
AC009269.3-201ENST00000558429 ABCB7O75027 752 aa14.31□□□□□ -0.12
AC009269.3-201ENST00000558429 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
AC009269.3-201ENST00000558429 POLA2Q14181 598 aa14.1□□□□□ -0.15
AC009269.3-201ENST00000558429 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
AC009269.3-201ENST00000558429 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
AC009269.3-201ENST00000558429 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
AC009269.3-201ENST00000558429 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
AC009269.3-201ENST00000558429 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
AC009269.3-201ENST00000558429 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
AC009269.3-201ENST00000558429 FBLN2P98095 1184 aa13.62□□□□□ -0.23
AC009269.3-201ENST00000558429 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
AC009269.3-201ENST00000558429 MKRN4PQ13434 485 aaPredicted RBP13.52□□□□□ -0.25
AC009269.3-201ENST00000558429 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
AC009269.3-201ENST00000558429 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
AC009269.3-201ENST00000558429 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
AC009269.3-201ENST00000558429 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
AC009269.3-201ENST00000558429 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
AC009269.3-201ENST00000558429 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
AC009269.3-201ENST00000558429 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
AC009269.3-201ENST00000558429 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
AC009269.3-201ENST00000558429 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
AC009269.3-201ENST00000558429 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
AC009269.3-201ENST00000558429 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
AC009269.3-201ENST00000558429 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
AC009269.3-201ENST00000558429 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
AC009269.3-201ENST00000558429 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
AC009269.3-201ENST00000558429 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
AC009269.3-201ENST00000558429 HAX1O00165 279 aa12.98□□□□□ -0.33
AC009269.3-201ENST00000558429 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
AC009269.3-201ENST00000558429 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
AC009269.3-201ENST00000558429 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
AC009269.3-201ENST00000558429 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
AC009269.3-201ENST00000558429 PROM2Q8N271 834 aa12.71□□□□□ -0.37
AC009269.3-201ENST00000558429 EVX2Q03828 476 aa12.68□□□□□ -0.38
AC009269.3-201ENST00000558429 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
AC009269.3-201ENST00000558429 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
AC009269.3-201ENST00000558429 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
AC009269.3-201ENST00000558429 FKBP8Q14318 412 aa12.62□□□□□ -0.39
AC009269.3-201ENST00000558429 LHX8Q68G74 356 aa12.56□□□□□ -0.4
AC009269.3-201ENST00000558429 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
AC009269.3-201ENST00000558429 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
AC009269.3-201ENST00000558429 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
AC009269.3-201ENST00000558429 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
AC009269.3-201ENST00000558429 GABBR2O75899 941 aa12.43□□□□□ -0.42
AC009269.3-201ENST00000558429 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
AC009269.3-201ENST00000558429 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
AC009269.3-201ENST00000558429 MIER1Q8N108 512 aa12.39□□□□□ -0.43
AC009269.3-201ENST00000558429 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
AC009269.3-201ENST00000558429 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
AC009269.3-201ENST00000558429 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
AC009269.3-201ENST00000558429 CLCN6P51797 869 aa12.3□□□□□ -0.44
AC009269.3-201ENST00000558429 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
AC009269.3-201ENST00000558429 PHF12Q96QT6 1004 aa12.25□□□□□ -0.45
AC009269.3-201ENST00000558429 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
AC009269.3-201ENST00000558429 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
AC009269.3-201ENST00000558429 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
AC009269.3-201ENST00000558429 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms