RNA–Protein interactions for RNA: ENST00000558258.1

AC009558.2-201, humanhuman

TSL 2 BASIC

Gene AC009558.2, Length 396 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009558.2-201ENST00000558258 AEBP2Q6ZN18 517 aaPredicted RBP25.2■■□□□ 1.62
AC009558.2-201ENST00000558258 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
AC009558.2-201ENST00000558258 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
AC009558.2-201ENST00000558258 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
AC009558.2-201ENST00000558258 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
AC009558.2-201ENST00000558258 FOXD1Q16676 465 aa19.78■□□□□ 0.76
AC009558.2-201ENST00000558258 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
AC009558.2-201ENST00000558258 ADRA2BP18089 450 aa19.09■□□□□ 0.65
AC009558.2-201ENST00000558258 PIAS4Q8N2W9 510 aaPredicted RBP18.64■□□□□ 0.57
AC009558.2-201ENST00000558258 MSH5O43196 834 aa18.11■□□□□ 0.49
AC009558.2-201ENST00000558258 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
AC009558.2-201ENST00000558258 KCNA4P22459 653 aa17.41■□□□□ 0.38
AC009558.2-201ENST00000558258 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
AC009558.2-201ENST00000558258 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
AC009558.2-201ENST00000558258 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
AC009558.2-201ENST00000558258 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
AC009558.2-201ENST00000558258 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
AC009558.2-201ENST00000558258 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
AC009558.2-201ENST00000558258 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
AC009558.2-201ENST00000558258 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
AC009558.2-201ENST00000558258 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
AC009558.2-201ENST00000558258 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
AC009558.2-201ENST00000558258 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
AC009558.2-201ENST00000558258 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
AC009558.2-201ENST00000558258 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
AC009558.2-201ENST00000558258 ZBTB22O15209 634 aa16.09■□□□□ 0.17
AC009558.2-201ENST00000558258 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
AC009558.2-201ENST00000558258 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
AC009558.2-201ENST00000558258 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
AC009558.2-201ENST00000558258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
AC009558.2-201ENST00000558258 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
AC009558.2-201ENST00000558258 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
AC009558.2-201ENST00000558258 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
AC009558.2-201ENST00000558258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
AC009558.2-201ENST00000558258 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
AC009558.2-201ENST00000558258 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
AC009558.2-201ENST00000558258 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
AC009558.2-201ENST00000558258 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
AC009558.2-201ENST00000558258 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
AC009558.2-201ENST00000558258 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
AC009558.2-201ENST00000558258 APLP2Q06481 763 aa15.17■□□□□ 0.02
AC009558.2-201ENST00000558258 CAPN15O75808 1086 aa15.09■□□□□ 0.01
AC009558.2-201ENST00000558258 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
AC009558.2-201ENST00000558258 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ -0
AC009558.2-201ENST00000558258 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
AC009558.2-201ENST00000558258 ABCB7O75027 752 aa14.88□□□□□ -0.03
AC009558.2-201ENST00000558258 DSG3P32926 999 aa14.87□□□□□ -0.03
AC009558.2-201ENST00000558258 POLA2Q14181 598 aa14.83□□□□□ -0.04
AC009558.2-201ENST00000558258 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
AC009558.2-201ENST00000558258 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
AC009558.2-201ENST00000558258 FBLN2P98095 1184 aa14.52□□□□□ -0.09
AC009558.2-201ENST00000558258 FKBP8Q14318 412 aa14.41□□□□□ -0.1
AC009558.2-201ENST00000558258 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
AC009558.2-201ENST00000558258 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
AC009558.2-201ENST00000558258 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
AC009558.2-201ENST00000558258 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
AC009558.2-201ENST00000558258 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
AC009558.2-201ENST00000558258 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
AC009558.2-201ENST00000558258 PROM2Q8N271 834 aa14.15□□□□□ -0.14
AC009558.2-201ENST00000558258 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
AC009558.2-201ENST00000558258 RBM42Q9BTD8 480 aaKnown RBP14.07□□□□□ -0.16
AC009558.2-201ENST00000558258 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
AC009558.2-201ENST00000558258 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
AC009558.2-201ENST00000558258 REM2Q8IYK8 340 aaPredicted RBP13.85□□□□□ -0.19
AC009558.2-201ENST00000558258 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
AC009558.2-201ENST00000558258 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
AC009558.2-201ENST00000558258 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
AC009558.2-201ENST00000558258 VASPP50552 380 aaPredicted RBP13.69□□□□□ -0.22
AC009558.2-201ENST00000558258 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
AC009558.2-201ENST00000558258 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
AC009558.2-201ENST00000558258 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
AC009558.2-201ENST00000558258 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
AC009558.2-201ENST00000558258 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
AC009558.2-201ENST00000558258 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
AC009558.2-201ENST00000558258 MIER1Q8N108 512 aa13.48□□□□□ -0.25
AC009558.2-201ENST00000558258 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
AC009558.2-201ENST00000558258 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC009558.2-201ENST00000558258 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
AC009558.2-201ENST00000558258 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
AC009558.2-201ENST00000558258 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
AC009558.2-201ENST00000558258 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
AC009558.2-201ENST00000558258 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
AC009558.2-201ENST00000558258 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
AC009558.2-201ENST00000558258 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
AC009558.2-201ENST00000558258 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
AC009558.2-201ENST00000558258 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
AC009558.2-201ENST00000558258 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
AC009558.2-201ENST00000558258 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
AC009558.2-201ENST00000558258 NUBP1P53384 320 aa13.22□□□□□ -0.29
AC009558.2-201ENST00000558258 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
AC009558.2-201ENST00000558258 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC009558.2-201ENST00000558258 PKD2Q13563 968 aa13.13□□□□□ -0.31
AC009558.2-201ENST00000558258 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
AC009558.2-201ENST00000558258 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
AC009558.2-201ENST00000558258 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
AC009558.2-201ENST00000558258 GSE1Q14687 1217 aa13□□□□□ -0.33
AC009558.2-201ENST00000558258 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
AC009558.2-201ENST00000558258 POTEHQ6S545 545 aa13□□□□□ -0.33
AC009558.2-201ENST00000558258 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
AC009558.2-201ENST00000558258 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms