RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.13
CRNDE-204ENST00000558031 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
CRNDE-204ENST00000558031 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
CRNDE-204ENST00000558031 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
CRNDE-204ENST00000558031 FOXD1Q16676 465 aa17.44■□□□□ 0.38
CRNDE-204ENST00000558031 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
CRNDE-204ENST00000558031 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
CRNDE-204ENST00000558031 ADRA2BP18089 450 aa16.6■□□□□ 0.25
CRNDE-204ENST00000558031 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
CRNDE-204ENST00000558031 MSH5O43196 834 aa16.16■□□□□ 0.18
CRNDE-204ENST00000558031 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
CRNDE-204ENST00000558031 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
CRNDE-204ENST00000558031 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
CRNDE-204ENST00000558031 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
CRNDE-204ENST00000558031 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
CRNDE-204ENST00000558031 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
CRNDE-204ENST00000558031 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
CRNDE-204ENST00000558031 KCNA4P22459 653 aa14.59□□□□□ -0.07
CRNDE-204ENST00000558031 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
CRNDE-204ENST00000558031 RNF216Q9NWF9 866 aaPredicted RBP14.55□□□□□ -0.08
CRNDE-204ENST00000558031 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
CRNDE-204ENST00000558031 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
CRNDE-204ENST00000558031 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
CRNDE-204ENST00000558031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
CRNDE-204ENST00000558031 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
CRNDE-204ENST00000558031 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
CRNDE-204ENST00000558031 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
CRNDE-204ENST00000558031 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
CRNDE-204ENST00000558031 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
CRNDE-204ENST00000558031 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
CRNDE-204ENST00000558031 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
CRNDE-204ENST00000558031 ZBTB22O15209 634 aa13.42□□□□□ -0.26
CRNDE-204ENST00000558031 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
CRNDE-204ENST00000558031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.38□□□□□ -0.27
CRNDE-204ENST00000558031 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
CRNDE-204ENST00000558031 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
CRNDE-204ENST00000558031 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
CRNDE-204ENST00000558031 CAPN15O75808 1086 aa13.28□□□□□ -0.28
CRNDE-204ENST00000558031 APLP2Q06481 763 aa13.28□□□□□ -0.28
CRNDE-204ENST00000558031 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
CRNDE-204ENST00000558031 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
CRNDE-204ENST00000558031 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
CRNDE-204ENST00000558031 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
CRNDE-204ENST00000558031 DSG3P32926 999 aa13.09□□□□□ -0.31
CRNDE-204ENST00000558031 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
CRNDE-204ENST00000558031 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
CRNDE-204ENST00000558031 ABCB7O75027 752 aa13.01□□□□□ -0.33
CRNDE-204ENST00000558031 POLA2Q14181 598 aa12.9□□□□□ -0.34
CRNDE-204ENST00000558031 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
CRNDE-204ENST00000558031 FBLN2P98095 1184 aa12.53□□□□□ -0.4
CRNDE-204ENST00000558031 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
CRNDE-204ENST00000558031 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
CRNDE-204ENST00000558031 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
CRNDE-204ENST00000558031 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
CRNDE-204ENST00000558031 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
CRNDE-204ENST00000558031 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
CRNDE-204ENST00000558031 AKT1S1Q96B36 256 aa12.28□□□□□ -0.44
CRNDE-204ENST00000558031 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
CRNDE-204ENST00000558031 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
CRNDE-204ENST00000558031 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
CRNDE-204ENST00000558031 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
CRNDE-204ENST00000558031 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
CRNDE-204ENST00000558031 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
CRNDE-204ENST00000558031 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
CRNDE-204ENST00000558031 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
CRNDE-204ENST00000558031 CLEC11AQ9Y240 323 aa11.97□□□□□ -0.49
CRNDE-204ENST00000558031 FKBP8Q14318 412 aa11.93□□□□□ -0.5
CRNDE-204ENST00000558031 POTEHQ6S545 545 aa11.91□□□□□ -0.5
CRNDE-204ENST00000558031 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
CRNDE-204ENST00000558031 PROM2Q8N271 834 aa11.85□□□□□ -0.51
CRNDE-204ENST00000558031 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
CRNDE-204ENST00000558031 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
CRNDE-204ENST00000558031 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
CRNDE-204ENST00000558031 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
CRNDE-204ENST00000558031 CHADLQ6NUI6 762 aa11.69□□□□□ -0.54
CRNDE-204ENST00000558031 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
CRNDE-204ENST00000558031 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
CRNDE-204ENST00000558031 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
CRNDE-204ENST00000558031 HAX1O00165 279 aa11.53□□□□□ -0.56
CRNDE-204ENST00000558031 MIER1Q8N108 512 aa11.51□□□□□ -0.57
CRNDE-204ENST00000558031 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
CRNDE-204ENST00000558031 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
CRNDE-204ENST00000558031 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
CRNDE-204ENST00000558031 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
CRNDE-204ENST00000558031 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
CRNDE-204ENST00000558031 EVX2Q03828 476 aa11.42□□□□□ -0.58
CRNDE-204ENST00000558031 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
CRNDE-204ENST00000558031 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
CRNDE-204ENST00000558031 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
CRNDE-204ENST00000558031 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
CRNDE-204ENST00000558031 PAK3O75914 559 aaPredicted RBP11.29□□□□□ -0.6
CRNDE-204ENST00000558031 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
CRNDE-204ENST00000558031 KLHL34Q8N239 644 aa11.27□□□□□ -0.61
CRNDE-204ENST00000558031 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
CRNDE-204ENST00000558031 NUBP1P53384 320 aa11.23□□□□□ -0.61
CRNDE-204ENST00000558031 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
CRNDE-204ENST00000558031 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
CRNDE-204ENST00000558031 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.61
CRNDE-204ENST00000558031 GABBR2O75899 941 aa11.19□□□□□ -0.62
CRNDE-204ENST00000558031 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms