RNA–Protein interactions for RNA: ENST00000558008.3

PCLAF-203, Transcript of PCNA clamp associated factor, humanhuman

TSL 3 BASIC

Gene PCLAF, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLAF-203ENST00000558008 AEBP2Q6ZN18 517 aaPredicted RBP27.21■■□□□ 1.95
PCLAF-203ENST00000558008 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
PCLAF-203ENST00000558008 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
PCLAF-203ENST00000558008 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
PCLAF-203ENST00000558008 FOXD1Q16676 465 aa21.54■■□□□ 1.04
PCLAF-203ENST00000558008 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
PCLAF-203ENST00000558008 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
PCLAF-203ENST00000558008 ADRA2BP18089 450 aa20.42■□□□□ 0.86
PCLAF-203ENST00000558008 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
PCLAF-203ENST00000558008 MSH5O43196 834 aa20.02■□□□□ 0.8
PCLAF-203ENST00000558008 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
PCLAF-203ENST00000558008 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
PCLAF-203ENST00000558008 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
PCLAF-203ENST00000558008 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
PCLAF-203ENST00000558008 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
PCLAF-203ENST00000558008 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
PCLAF-203ENST00000558008 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
PCLAF-203ENST00000558008 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
PCLAF-203ENST00000558008 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
PCLAF-203ENST00000558008 KCNA4P22459 653 aa17.77■□□□□ 0.44
PCLAF-203ENST00000558008 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
PCLAF-203ENST00000558008 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
PCLAF-203ENST00000558008 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
PCLAF-203ENST00000558008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.332e-6■■■■□ 20.7
PCLAF-203ENST00000558008 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
PCLAF-203ENST00000558008 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
PCLAF-203ENST00000558008 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
PCLAF-203ENST00000558008 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
PCLAF-203ENST00000558008 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
PCLAF-203ENST00000558008 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
PCLAF-203ENST00000558008 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
PCLAF-203ENST00000558008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
PCLAF-203ENST00000558008 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
PCLAF-203ENST00000558008 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
PCLAF-203ENST00000558008 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
PCLAF-203ENST00000558008 CAPN15O75808 1086 aa16.41■□□□□ 0.22
PCLAF-203ENST00000558008 APLP2Q06481 763 aa16.37■□□□□ 0.21
PCLAF-203ENST00000558008 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
PCLAF-203ENST00000558008 ZBTB22O15209 634 aa16.32■□□□□ 0.2
PCLAF-203ENST00000558008 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
PCLAF-203ENST00000558008 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
PCLAF-203ENST00000558008 DSG3P32926 999 aa16.16■□□□□ 0.18
PCLAF-203ENST00000558008 ABCB7O75027 752 aa16.07■□□□□ 0.16
PCLAF-203ENST00000558008 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
PCLAF-203ENST00000558008 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
PCLAF-203ENST00000558008 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
PCLAF-203ENST00000558008 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
PCLAF-203ENST00000558008 POLA2Q14181 598 aa15.86■□□□□ 0.13
PCLAF-203ENST00000558008 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
PCLAF-203ENST00000558008 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
PCLAF-203ENST00000558008 FBLN2P98095 1184 aa15.39■□□□□ 0.05
PCLAF-203ENST00000558008 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
PCLAF-203ENST00000558008 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
PCLAF-203ENST00000558008 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
PCLAF-203ENST00000558008 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
PCLAF-203ENST00000558008 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
PCLAF-203ENST00000558008 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
PCLAF-203ENST00000558008 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
PCLAF-203ENST00000558008 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
PCLAF-203ENST00000558008 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
PCLAF-203ENST00000558008 SSUH2Q9Y2M2 353 aa14.93□□□□□ -0.02
PCLAF-203ENST00000558008 POTEHQ6S545 545 aa14.87□□□□□ -0.03
PCLAF-203ENST00000558008 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
PCLAF-203ENST00000558008 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
PCLAF-203ENST00000558008 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
PCLAF-203ENST00000558008 CLEC11AQ9Y240 323 aa14.78□□□□□ -0.04
PCLAF-203ENST00000558008 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
PCLAF-203ENST00000558008 PIP4P2Q8N4L2 257 aa14.65□□□□□ -0.06
PCLAF-203ENST00000558008 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
PCLAF-203ENST00000558008 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
PCLAF-203ENST00000558008 PRKAR2AP13861 404 aaKnown RBP14.49□□□□□ -0.09
PCLAF-203ENST00000558008 FKBP8Q14318 412 aa14.49□□□□□ -0.09
PCLAF-203ENST00000558008 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
PCLAF-203ENST00000558008 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
PCLAF-203ENST00000558008 PROM2Q8N271 834 aa14.41□□□□□ -0.1
PCLAF-203ENST00000558008 HAX1O00165 279 aa14.32□□□□□ -0.12
PCLAF-203ENST00000558008 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
PCLAF-203ENST00000558008 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
PCLAF-203ENST00000558008 C19orf67A6NJJ6 358 aa14.13□□□□□ -0.15
PCLAF-203ENST00000558008 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
PCLAF-203ENST00000558008 EVX2Q03828 476 aa14.12□□□□□ -0.15
PCLAF-203ENST00000558008 MIER1Q8N108 512 aa14.09□□□□□ -0.15
PCLAF-203ENST00000558008 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
PCLAF-203ENST00000558008 CD44P16070 742 aaKnown RBP14.06□□□□□ -0.16
PCLAF-203ENST00000558008 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
PCLAF-203ENST00000558008 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCLAF-203ENST00000558008 PLCD3Q8N3E9 789 aa14.04□□□□□ -0.16
PCLAF-203ENST00000558008 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
PCLAF-203ENST00000558008 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
PCLAF-203ENST00000558008 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
PCLAF-203ENST00000558008 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
PCLAF-203ENST00000558008 VASPP50552 380 aaPredicted RBP13.86□□□□□ -0.19
PCLAF-203ENST00000558008 GABBR2O75899 941 aa13.84□□□□□ -0.19
PCLAF-203ENST00000558008 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
PCLAF-203ENST00000558008 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
PCLAF-203ENST00000558008 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
PCLAF-203ENST00000558008 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
PCLAF-203ENST00000558008 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
PCLAF-203ENST00000558008 CLCN6P51797 869 aa13.73□□□□□ -0.21
PCLAF-203ENST00000558008 NUBP1P53384 320 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms