RNA–Protein interactions for RNA: ENST00000557954.1

PDE8A-207, Transcript of phosphodiesterase 8A, humanhuman

TSL 4

Gene PDE8A, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-207ENST00000557954 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
PDE8A-207ENST00000557954 CHIC1Q5VXU3 224 aa25.84■■□□□ 1.73
PDE8A-207ENST00000557954 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
PDE8A-207ENST00000557954 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
PDE8A-207ENST00000557954 FOXD1Q16676 465 aa21.44■■□□□ 1.02
PDE8A-207ENST00000557954 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
PDE8A-207ENST00000557954 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
PDE8A-207ENST00000557954 ADRA2BP18089 450 aa20.19■□□□□ 0.82
PDE8A-207ENST00000557954 PIAS4Q8N2W9 510 aaPredicted RBP20■□□□□ 0.79
PDE8A-207ENST00000557954 MSH5O43196 834 aa19.82■□□□□ 0.76
PDE8A-207ENST00000557954 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
PDE8A-207ENST00000557954 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
PDE8A-207ENST00000557954 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
PDE8A-207ENST00000557954 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
PDE8A-207ENST00000557954 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
PDE8A-207ENST00000557954 CNKSR2Q8WXI2 1034 aa17.77■□□□□ 0.44
PDE8A-207ENST00000557954 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
PDE8A-207ENST00000557954 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
PDE8A-207ENST00000557954 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
PDE8A-207ENST00000557954 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
PDE8A-207ENST00000557954 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
PDE8A-207ENST00000557954 KCNA4P22459 653 aa17.23■□□□□ 0.35
PDE8A-207ENST00000557954 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
PDE8A-207ENST00000557954 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
PDE8A-207ENST00000557954 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
PDE8A-207ENST00000557954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.277e-6■□□□□ 10.8
PDE8A-207ENST00000557954 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
PDE8A-207ENST00000557954 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
PDE8A-207ENST00000557954 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
PDE8A-207ENST00000557954 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
PDE8A-207ENST00000557954 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
PDE8A-207ENST00000557954 CAPN15O75808 1086 aa16.11■□□□□ 0.17
PDE8A-207ENST00000557954 DSG3P32926 999 aa16.03■□□□□ 0.16
PDE8A-207ENST00000557954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
PDE8A-207ENST00000557954 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
PDE8A-207ENST00000557954 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
PDE8A-207ENST00000557954 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
PDE8A-207ENST00000557954 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
PDE8A-207ENST00000557954 ZBTB22O15209 634 aa15.91■□□□□ 0.14
PDE8A-207ENST00000557954 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
PDE8A-207ENST00000557954 APLP2Q06481 763 aa15.86■□□□□ 0.13
PDE8A-207ENST00000557954 ABCB7O75027 752 aa15.83■□□□□ 0.12
PDE8A-207ENST00000557954 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
PDE8A-207ENST00000557954 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
PDE8A-207ENST00000557954 POLA2Q14181 598 aa15.57■□□□□ 0.08
PDE8A-207ENST00000557954 ATXN8OSP0DMR3 200 aa15.37■□□□□ 0.05
PDE8A-207ENST00000557954 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
PDE8A-207ENST00000557954 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
PDE8A-207ENST00000557954 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
PDE8A-207ENST00000557954 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
PDE8A-207ENST00000557954 OSCARQ8IYS5 282 aa15.07■□□□□ 0
PDE8A-207ENST00000557954 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
PDE8A-207ENST00000557954 POTEHQ6S545 545 aa14.98□□□□□ -0.01
PDE8A-207ENST00000557954 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
PDE8A-207ENST00000557954 FBLN2P98095 1184 aa14.88□□□□□ -0.03
PDE8A-207ENST00000557954 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
PDE8A-207ENST00000557954 CHRDL2Q6WN34 429 aa14.82□□□□□ -0.04
PDE8A-207ENST00000557954 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
PDE8A-207ENST00000557954 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
PDE8A-207ENST00000557954 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
PDE8A-207ENST00000557954 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
PDE8A-207ENST00000557954 SSUH2Q9Y2M2 353 aa14.65□□□□□ -0.06
PDE8A-207ENST00000557954 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
PDE8A-207ENST00000557954 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
PDE8A-207ENST00000557954 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDE8A-207ENST00000557954 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDE8A-207ENST00000557954 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
PDE8A-207ENST00000557954 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
PDE8A-207ENST00000557954 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
PDE8A-207ENST00000557954 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
PDE8A-207ENST00000557954 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
PDE8A-207ENST00000557954 PRR29P0C7W0 189 aa14.2□□□□□ -0.14
PDE8A-207ENST00000557954 EVX2Q03828 476 aa14.19□□□□□ -0.14
PDE8A-207ENST00000557954 HAX1O00165 279 aa14.18□□□□□ -0.14
PDE8A-207ENST00000557954 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
PDE8A-207ENST00000557954 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
PDE8A-207ENST00000557954 PROM2Q8N271 834 aa14.04□□□□□ -0.16
PDE8A-207ENST00000557954 CREBZFQ9NS37 354 aa14□□□□□ -0.17
PDE8A-207ENST00000557954 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
PDE8A-207ENST00000557954 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
PDE8A-207ENST00000557954 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
PDE8A-207ENST00000557954 FKBP8Q14318 412 aa13.82□□□□□ -0.2
PDE8A-207ENST00000557954 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
PDE8A-207ENST00000557954 GABBR2O75899 941 aa13.78□□□□□ -0.2
PDE8A-207ENST00000557954 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
PDE8A-207ENST00000557954 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
PDE8A-207ENST00000557954 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDE8A-207ENST00000557954 MIER1Q8N108 512 aa13.58□□□□□ -0.24
PDE8A-207ENST00000557954 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
PDE8A-207ENST00000557954 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
PDE8A-207ENST00000557954 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
PDE8A-207ENST00000557954 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
PDE8A-207ENST00000557954 CLCN6P51797 869 aa13.47□□□□□ -0.25
PDE8A-207ENST00000557954 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
PDE8A-207ENST00000557954 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
PDE8A-207ENST00000557954 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
PDE8A-207ENST00000557954 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
PDE8A-207ENST00000557954 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
PDE8A-207ENST00000557954 NUBP1P53384 320 aa13.38□□□□□ -0.27
PDE8A-207ENST00000557954 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms