RNA–Protein interactions for RNA: ENST00000557632.1

PSMC6-217, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-217ENST00000557632 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
PSMC6-217ENST00000557632 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
PSMC6-217ENST00000557632 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
PSMC6-217ENST00000557632 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
PSMC6-217ENST00000557632 FOXD1Q16676 465 aa20.49■□□□□ 0.87
PSMC6-217ENST00000557632 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
PSMC6-217ENST00000557632 POTEDQ86YR6 584 aa19.57■□□□□ 0.72
PSMC6-217ENST00000557632 MSH5O43196 834 aa19.09■□□□□ 0.65
PSMC6-217ENST00000557632 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
PSMC6-217ENST00000557632 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
PSMC6-217ENST00000557632 ADRA2BP18089 450 aa18.79■□□□□ 0.6
PSMC6-217ENST00000557632 KCNA4P22459 653 aa17.64■□□□□ 0.41
PSMC6-217ENST00000557632 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
PSMC6-217ENST00000557632 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
PSMC6-217ENST00000557632 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
PSMC6-217ENST00000557632 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
PSMC6-217ENST00000557632 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
PSMC6-217ENST00000557632 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
PSMC6-217ENST00000557632 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
PSMC6-217ENST00000557632 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
PSMC6-217ENST00000557632 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
PSMC6-217ENST00000557632 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
PSMC6-217ENST00000557632 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
PSMC6-217ENST00000557632 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
PSMC6-217ENST00000557632 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
PSMC6-217ENST00000557632 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
PSMC6-217ENST00000557632 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
PSMC6-217ENST00000557632 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
PSMC6-217ENST00000557632 ZBTB22O15209 634 aa16.23■□□□□ 0.19
PSMC6-217ENST00000557632 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
PSMC6-217ENST00000557632 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
PSMC6-217ENST00000557632 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
PSMC6-217ENST00000557632 MYCNP04198 464 aaPredicted RBP15.7■□□□□ 0.1
PSMC6-217ENST00000557632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
PSMC6-217ENST00000557632 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
PSMC6-217ENST00000557632 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
PSMC6-217ENST00000557632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
PSMC6-217ENST00000557632 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
PSMC6-217ENST00000557632 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
PSMC6-217ENST00000557632 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
PSMC6-217ENST00000557632 DSG3P32926 999 aa15.24■□□□□ 0.03
PSMC6-217ENST00000557632 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
PSMC6-217ENST00000557632 POTEHQ6S545 545 aa15.18■□□□□ 0.02
PSMC6-217ENST00000557632 APLP2Q06481 763 aa15.13■□□□□ 0.01
PSMC6-217ENST00000557632 CAPN15O75808 1086 aa15.12■□□□□ 0.01
PSMC6-217ENST00000557632 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
PSMC6-217ENST00000557632 FKBP8Q14318 412 aa14.89□□□□□ -0.03
PSMC6-217ENST00000557632 ABCB7O75027 752 aa14.85□□□□□ -0.03
PSMC6-217ENST00000557632 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
PSMC6-217ENST00000557632 POLA2Q14181 598 aa14.67□□□□□ -0.06
PSMC6-217ENST00000557632 FBLN2P98095 1184 aa14.6□□□□□ -0.07
PSMC6-217ENST00000557632 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
PSMC6-217ENST00000557632 SPDYE4A6NLX3 237 aa14.48□□□□□ -0.09
PSMC6-217ENST00000557632 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
PSMC6-217ENST00000557632 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
PSMC6-217ENST00000557632 RBM42Q9BTD8 480 aaKnown RBP14.31□□□□□ -0.12
PSMC6-217ENST00000557632 AMER1Q5JTC6 1135 aaPredicted RBP14.3□□□□□ -0.12
PSMC6-217ENST00000557632 PROM2Q8N271 834 aa14.28□□□□□ -0.12
PSMC6-217ENST00000557632 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
PSMC6-217ENST00000557632 FBXO3Q9UK99 471 aa14.26□□□□□ -0.13
PSMC6-217ENST00000557632 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
PSMC6-217ENST00000557632 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
PSMC6-217ENST00000557632 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
PSMC6-217ENST00000557632 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
PSMC6-217ENST00000557632 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
PSMC6-217ENST00000557632 VASPP50552 380 aaPredicted RBP14.04□□□□□ -0.16
PSMC6-217ENST00000557632 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
PSMC6-217ENST00000557632 SP7Q8TDD2 431 aaPredicted RBP14.01□□□□□ -0.17
PSMC6-217ENST00000557632 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
PSMC6-217ENST00000557632 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
PSMC6-217ENST00000557632 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
PSMC6-217ENST00000557632 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
PSMC6-217ENST00000557632 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
PSMC6-217ENST00000557632 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
PSMC6-217ENST00000557632 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
PSMC6-217ENST00000557632 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.2
PSMC6-217ENST00000557632 EVX2Q03828 476 aa13.78□□□□□ -0.2
PSMC6-217ENST00000557632 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
PSMC6-217ENST00000557632 HAX1O00165 279 aa13.72□□□□□ -0.21
PSMC6-217ENST00000557632 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
PSMC6-217ENST00000557632 MIER1Q8N108 512 aa13.69□□□□□ -0.22
PSMC6-217ENST00000557632 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
PSMC6-217ENST00000557632 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
PSMC6-217ENST00000557632 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
PSMC6-217ENST00000557632 SLC24A1O60721 1099 aa13.56□□□□□ -0.24
PSMC6-217ENST00000557632 PKD2Q13563 968 aa13.56□□□□□ -0.24
PSMC6-217ENST00000557632 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
PSMC6-217ENST00000557632 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
PSMC6-217ENST00000557632 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
PSMC6-217ENST00000557632 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
PSMC6-217ENST00000557632 PRKAR2AP13861 404 aaKnown RBP13.43□□□□□ -0.26
PSMC6-217ENST00000557632 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
PSMC6-217ENST00000557632 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
PSMC6-217ENST00000557632 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
PSMC6-217ENST00000557632 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
PSMC6-217ENST00000557632 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
PSMC6-217ENST00000557632 GABBR2O75899 941 aa13.28□□□□□ -0.28
PSMC6-217ENST00000557632 NUBP1P53384 320 aa13.28□□□□□ -0.28
PSMC6-217ENST00000557632 RGL2O15211 777 aa13.27□□□□□ -0.29
PSMC6-217ENST00000557632 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms