RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
HIF1A-210ENST00000557206 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
HIF1A-210ENST00000557206 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
HIF1A-210ENST00000557206 PHF23Q9BUL5 403 aaPredicted RBP21.81■■□□□ 1.08
HIF1A-210ENST00000557206 FOXD1Q16676 465 aa20.46■□□□□ 0.87
HIF1A-210ENST00000557206 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
HIF1A-210ENST00000557206 MSH5O43196 834 aa19.26■□□□□ 0.67
HIF1A-210ENST00000557206 ADRA2BP18089 450 aa19.22■□□□□ 0.67
HIF1A-210ENST00000557206 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
HIF1A-210ENST00000557206 PIAS4Q8N2W9 510 aaPredicted RBP19.12■□□□□ 0.65
HIF1A-210ENST00000557206 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
HIF1A-210ENST00000557206 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
HIF1A-210ENST00000557206 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
HIF1A-210ENST00000557206 KCNA4P22459 653 aa17.69■□□□□ 0.42
HIF1A-210ENST00000557206 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
HIF1A-210ENST00000557206 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
HIF1A-210ENST00000557206 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
HIF1A-210ENST00000557206 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
HIF1A-210ENST00000557206 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
HIF1A-210ENST00000557206 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
HIF1A-210ENST00000557206 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
HIF1A-210ENST00000557206 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
HIF1A-210ENST00000557206 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
HIF1A-210ENST00000557206 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
HIF1A-210ENST00000557206 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
HIF1A-210ENST00000557206 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
HIF1A-210ENST00000557206 RNF39Q9H2S5 420 aa16.39■□□□□ 0.21
HIF1A-210ENST00000557206 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
HIF1A-210ENST00000557206 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
HIF1A-210ENST00000557206 ZBTB22O15209 634 aa16.22■□□□□ 0.19
HIF1A-210ENST00000557206 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
HIF1A-210ENST00000557206 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
HIF1A-210ENST00000557206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.172e-6■■■□□ 15.1
HIF1A-210ENST00000557206 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
HIF1A-210ENST00000557206 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
HIF1A-210ENST00000557206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
HIF1A-210ENST00000557206 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
HIF1A-210ENST00000557206 SAMD1Q6SPF0 538 aaPredicted RBP15.7■□□□□ 0.1
HIF1A-210ENST00000557206 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
HIF1A-210ENST00000557206 APLP2Q06481 763 aa15.59■□□□□ 0.09
HIF1A-210ENST00000557206 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
HIF1A-210ENST00000557206 CAPN15O75808 1086 aa15.38■□□□□ 0.05
HIF1A-210ENST00000557206 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
HIF1A-210ENST00000557206 DSG3P32926 999 aa15.3■□□□□ 0.04
HIF1A-210ENST00000557206 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
HIF1A-210ENST00000557206 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
HIF1A-210ENST00000557206 POLA2Q14181 598 aa15.06■□□□□ 0
HIF1A-210ENST00000557206 ABCB7O75027 752 aa15.01□□□□□ -0.01
HIF1A-210ENST00000557206 FBLN2P98095 1184 aa14.91□□□□□ -0.02
HIF1A-210ENST00000557206 ZBTB12Q9Y330 459 aaPredicted RBP14.86□□□□□ -0.03
HIF1A-210ENST00000557206 FKBP8Q14318 412 aa14.83□□□□□ -0.04
HIF1A-210ENST00000557206 POTEHQ6S545 545 aa14.83□□□□□ -0.04
HIF1A-210ENST00000557206 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
HIF1A-210ENST00000557206 RBM42Q9BTD8 480 aaKnown RBP14.67□□□□□ -0.06
HIF1A-210ENST00000557206 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
HIF1A-210ENST00000557206 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
HIF1A-210ENST00000557206 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
HIF1A-210ENST00000557206 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
HIF1A-210ENST00000557206 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
HIF1A-210ENST00000557206 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
HIF1A-210ENST00000557206 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
HIF1A-210ENST00000557206 PROM2Q8N271 834 aa14.31□□□□□ -0.12
HIF1A-210ENST00000557206 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
HIF1A-210ENST00000557206 SSUH2Q9Y2M2 353 aa14.29□□□□□ -0.12
HIF1A-210ENST00000557206 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
HIF1A-210ENST00000557206 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
HIF1A-210ENST00000557206 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
HIF1A-210ENST00000557206 STAG3Q9UJ98 1225 aa14.09□□□□□ -0.15
HIF1A-210ENST00000557206 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
HIF1A-210ENST00000557206 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
HIF1A-210ENST00000557206 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
HIF1A-210ENST00000557206 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
HIF1A-210ENST00000557206 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
HIF1A-210ENST00000557206 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
HIF1A-210ENST00000557206 MIER1Q8N108 512 aa13.9□□□□□ -0.18
HIF1A-210ENST00000557206 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
HIF1A-210ENST00000557206 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
HIF1A-210ENST00000557206 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
HIF1A-210ENST00000557206 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
HIF1A-210ENST00000557206 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
HIF1A-210ENST00000557206 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
HIF1A-210ENST00000557206 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
HIF1A-210ENST00000557206 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
HIF1A-210ENST00000557206 HAX1O00165 279 aa13.77□□□□□ -0.21
HIF1A-210ENST00000557206 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
HIF1A-210ENST00000557206 SPOCK2Q92563 424 aa13.69□□□□□ -0.22
HIF1A-210ENST00000557206 CREBZFQ9NS37 354 aa13.63□□□□□ -0.23
HIF1A-210ENST00000557206 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
HIF1A-210ENST00000557206 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
HIF1A-210ENST00000557206 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
HIF1A-210ENST00000557206 EVX2Q03828 476 aa13.51□□□□□ -0.25
HIF1A-210ENST00000557206 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
HIF1A-210ENST00000557206 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
HIF1A-210ENST00000557206 C19orf67A6NJJ6 358 aa13.43□□□□□ -0.26
HIF1A-210ENST00000557206 PKD2Q13563 968 aa13.42□□□□□ -0.26
HIF1A-210ENST00000557206 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
HIF1A-210ENST00000557206 NUBP1P53384 320 aa13.41□□□□□ -0.26
HIF1A-210ENST00000557206 GSE1Q14687 1217 aa13.41□□□□□ -0.26
HIF1A-210ENST00000557206 DCAF8Q5TAQ9 597 aa13.41□□□□□ -0.26
HIF1A-210ENST00000557206 ECM2O94769 699 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms