RNA–Protein interactions for RNA: ENST00000556691.5

NEMF-211, Transcript of nuclear export mediator factor, humanhuman

TSL 2

Gene NEMF, Length 2,062 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-211ENST00000556691 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
NEMF-211ENST00000556691 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
NEMF-211ENST00000556691 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
NEMF-211ENST00000556691 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
NEMF-211ENST00000556691 FOXD1Q16676 465 aa18.84■□□□□ 0.61
NEMF-211ENST00000556691 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
NEMF-211ENST00000556691 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
NEMF-211ENST00000556691 ADRA2BP18089 450 aa17.95■□□□□ 0.46
NEMF-211ENST00000556691 PIAS4Q8N2W9 510 aaPredicted RBP17.74■□□□□ 0.43
NEMF-211ENST00000556691 MSH5O43196 834 aa17.44■□□□□ 0.38
NEMF-211ENST00000556691 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
NEMF-211ENST00000556691 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
NEMF-211ENST00000556691 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
NEMF-211ENST00000556691 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
NEMF-211ENST00000556691 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
NEMF-211ENST00000556691 CNKSR2Q8WXI2 1034 aa15.98■□□□□ 0.15
NEMF-211ENST00000556691 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
NEMF-211ENST00000556691 KCNA4P22459 653 aa15.82■□□□□ 0.12
NEMF-211ENST00000556691 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
NEMF-211ENST00000556691 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
NEMF-211ENST00000556691 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
NEMF-211ENST00000556691 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
NEMF-211ENST00000556691 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
NEMF-211ENST00000556691 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
NEMF-211ENST00000556691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.017e-9■■□□□ 13
NEMF-211ENST00000556691 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
NEMF-211ENST00000556691 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
NEMF-211ENST00000556691 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
NEMF-211ENST00000556691 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
NEMF-211ENST00000556691 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
NEMF-211ENST00000556691 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
NEMF-211ENST00000556691 ZBTB22O15209 634 aa14.56□□□□□ -0.08
NEMF-211ENST00000556691 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
NEMF-211ENST00000556691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
NEMF-211ENST00000556691 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
NEMF-211ENST00000556691 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
NEMF-211ENST00000556691 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
NEMF-211ENST00000556691 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
NEMF-211ENST00000556691 CAPN15O75808 1086 aa14.34□□□□□ -0.11
NEMF-211ENST00000556691 APLP2Q06481 763 aa14.33□□□□□ -0.12
NEMF-211ENST00000556691 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
NEMF-211ENST00000556691 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
NEMF-211ENST00000556691 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.14
NEMF-211ENST00000556691 DSG3P32926 999 aa14.14□□□□□ -0.15
NEMF-211ENST00000556691 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
NEMF-211ENST00000556691 ATXN8OSP0DMR3 200 aa14.07□□□□□ -0.16
NEMF-211ENST00000556691 ABCB7O75027 752 aa14.06□□□□□ -0.16
NEMF-211ENST00000556691 POLA2Q14181 598 aa13.95□□□□□ -0.18
NEMF-211ENST00000556691 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
NEMF-211ENST00000556691 FBLN2P98095 1184 aa13.54□□□□□ -0.24
NEMF-211ENST00000556691 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
NEMF-211ENST00000556691 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
NEMF-211ENST00000556691 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
NEMF-211ENST00000556691 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
NEMF-211ENST00000556691 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
NEMF-211ENST00000556691 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
NEMF-211ENST00000556691 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
NEMF-211ENST00000556691 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
NEMF-211ENST00000556691 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
NEMF-211ENST00000556691 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
NEMF-211ENST00000556691 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
NEMF-211ENST00000556691 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
NEMF-211ENST00000556691 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
NEMF-211ENST00000556691 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
NEMF-211ENST00000556691 SPDYE1Q8NFV5 336 aaPredicted RBP12.95□□□□□ -0.34
NEMF-211ENST00000556691 FKBP8Q14318 412 aa12.93□□□□□ -0.34
NEMF-211ENST00000556691 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
NEMF-211ENST00000556691 POTEHQ6S545 545 aa12.84□□□□□ -0.35
NEMF-211ENST00000556691 PROM2Q8N271 834 aa12.84□□□□□ -0.35
NEMF-211ENST00000556691 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
NEMF-211ENST00000556691 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.365e-6■□□□□ 8.9
NEMF-211ENST00000556691 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
NEMF-211ENST00000556691 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
NEMF-211ENST00000556691 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
NEMF-211ENST00000556691 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
NEMF-211ENST00000556691 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
NEMF-211ENST00000556691 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
NEMF-211ENST00000556691 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
NEMF-211ENST00000556691 HAX1O00165 279 aa12.45□□□□□ -0.42
NEMF-211ENST00000556691 MIER1Q8N108 512 aa12.44□□□□□ -0.42
NEMF-211ENST00000556691 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
NEMF-211ENST00000556691 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
NEMF-211ENST00000556691 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
NEMF-211ENST00000556691 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
NEMF-211ENST00000556691 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
NEMF-211ENST00000556691 EVX2Q03828 476 aa12.33□□□□□ -0.44
NEMF-211ENST00000556691 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
NEMF-211ENST00000556691 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
NEMF-211ENST00000556691 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
NEMF-211ENST00000556691 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
NEMF-211ENST00000556691 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
NEMF-211ENST00000556691 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
NEMF-211ENST00000556691 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
NEMF-211ENST00000556691 IFNLR1Q8IU57 520 aaPredicted RBP12.18□□□□□ -0.46
NEMF-211ENST00000556691 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
NEMF-211ENST00000556691 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
NEMF-211ENST00000556691 NUBP1P53384 320 aa12.14□□□□□ -0.47
NEMF-211ENST00000556691 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
NEMF-211ENST00000556691 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
NEMF-211ENST00000556691 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms