RNA–Protein interactions for RNA: ENST00000556620.1

AL049875.1-202, humanhuman

TSL 3 BASIC

Gene AL049875.1, Length 857 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049875.1-202ENST00000556620 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
AL049875.1-202ENST00000556620 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
AL049875.1-202ENST00000556620 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
AL049875.1-202ENST00000556620 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
AL049875.1-202ENST00000556620 FOXD1Q16676 465 aa17.83■□□□□ 0.44
AL049875.1-202ENST00000556620 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
AL049875.1-202ENST00000556620 MSH5O43196 834 aa16.69■□□□□ 0.26
AL049875.1-202ENST00000556620 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
AL049875.1-202ENST00000556620 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
AL049875.1-202ENST00000556620 ADRA2BP18089 450 aa16.65■□□□□ 0.26
AL049875.1-202ENST00000556620 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
AL049875.1-202ENST00000556620 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
AL049875.1-202ENST00000556620 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
AL049875.1-202ENST00000556620 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
AL049875.1-202ENST00000556620 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
AL049875.1-202ENST00000556620 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
AL049875.1-202ENST00000556620 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
AL049875.1-202ENST00000556620 KCNA4P22459 653 aa14.69□□□□□ -0.06
AL049875.1-202ENST00000556620 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
AL049875.1-202ENST00000556620 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
AL049875.1-202ENST00000556620 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
AL049875.1-202ENST00000556620 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
AL049875.1-202ENST00000556620 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
AL049875.1-202ENST00000556620 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
AL049875.1-202ENST00000556620 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
AL049875.1-202ENST00000556620 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
AL049875.1-202ENST00000556620 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
AL049875.1-202ENST00000556620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
AL049875.1-202ENST00000556620 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
AL049875.1-202ENST00000556620 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
AL049875.1-202ENST00000556620 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
AL049875.1-202ENST00000556620 ZBTB22O15209 634 aa13.51□□□□□ -0.25
AL049875.1-202ENST00000556620 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
AL049875.1-202ENST00000556620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
AL049875.1-202ENST00000556620 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
AL049875.1-202ENST00000556620 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
AL049875.1-202ENST00000556620 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
AL049875.1-202ENST00000556620 CAPN15O75808 1086 aa13.4□□□□□ -0.26
AL049875.1-202ENST00000556620 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
AL049875.1-202ENST00000556620 APLP2Q06481 763 aa13.37□□□□□ -0.27
AL049875.1-202ENST00000556620 DSG3P32926 999 aa13.34□□□□□ -0.27
AL049875.1-202ENST00000556620 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
AL049875.1-202ENST00000556620 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
AL049875.1-202ENST00000556620 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
AL049875.1-202ENST00000556620 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
AL049875.1-202ENST00000556620 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
AL049875.1-202ENST00000556620 ABCB7O75027 752 aa13.1□□□□□ -0.31
AL049875.1-202ENST00000556620 POLA2Q14181 598 aa12.93□□□□□ -0.34
AL049875.1-202ENST00000556620 POTEHQ6S545 545 aa12.79□□□□□ -0.36
AL049875.1-202ENST00000556620 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
AL049875.1-202ENST00000556620 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
AL049875.1-202ENST00000556620 FBLN2P98095 1184 aa12.62□□□□□ -0.39
AL049875.1-202ENST00000556620 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
AL049875.1-202ENST00000556620 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
AL049875.1-202ENST00000556620 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
AL049875.1-202ENST00000556620 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
AL049875.1-202ENST00000556620 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
AL049875.1-202ENST00000556620 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
AL049875.1-202ENST00000556620 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
AL049875.1-202ENST00000556620 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
AL049875.1-202ENST00000556620 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
AL049875.1-202ENST00000556620 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
AL049875.1-202ENST00000556620 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
AL049875.1-202ENST00000556620 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
AL049875.1-202ENST00000556620 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
AL049875.1-202ENST00000556620 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
AL049875.1-202ENST00000556620 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
AL049875.1-202ENST00000556620 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
AL049875.1-202ENST00000556620 FKBP8Q14318 412 aa12.03□□□□□ -0.48
AL049875.1-202ENST00000556620 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
AL049875.1-202ENST00000556620 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
AL049875.1-202ENST00000556620 PROM2Q8N271 834 aa11.95□□□□□ -0.5
AL049875.1-202ENST00000556620 HAX1O00165 279 aa11.92□□□□□ -0.5
AL049875.1-202ENST00000556620 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
AL049875.1-202ENST00000556620 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
AL049875.1-202ENST00000556620 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
AL049875.1-202ENST00000556620 EVX2Q03828 476 aa11.79□□□□□ -0.52
AL049875.1-202ENST00000556620 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
AL049875.1-202ENST00000556620 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
AL049875.1-202ENST00000556620 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
AL049875.1-202ENST00000556620 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
AL049875.1-202ENST00000556620 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
AL049875.1-202ENST00000556620 MIER1Q8N108 512 aa11.58□□□□□ -0.56
AL049875.1-202ENST00000556620 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
AL049875.1-202ENST00000556620 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
AL049875.1-202ENST00000556620 GABBR2O75899 941 aa11.53□□□□□ -0.56
AL049875.1-202ENST00000556620 VASPP50552 380 aaPredicted RBP11.52□□□□□ -0.57
AL049875.1-202ENST00000556620 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
AL049875.1-202ENST00000556620 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
AL049875.1-202ENST00000556620 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
AL049875.1-202ENST00000556620 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
AL049875.1-202ENST00000556620 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
AL049875.1-202ENST00000556620 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
AL049875.1-202ENST00000556620 CLCN6P51797 869 aa11.33□□□□□ -0.6
AL049875.1-202ENST00000556620 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
AL049875.1-202ENST00000556620 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
AL049875.1-202ENST00000556620 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
AL049875.1-202ENST00000556620 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
AL049875.1-202ENST00000556620 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
AL049875.1-202ENST00000556620 NUBP1P53384 320 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms