RNA–Protein interactions for RNA: ENST00000556620.1

AL049875.1-202, humanhuman

TSL 3 BASIC

Gene AL049875.1, Length 857 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049875.1-202ENST00000556620 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
AL049875.1-202ENST00000556620 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
AL049875.1-202ENST00000556620 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
AL049875.1-202ENST00000556620 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
AL049875.1-202ENST00000556620 FOXD1Q16676 465 aa17.83■□□□□ 0.44
AL049875.1-202ENST00000556620 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
AL049875.1-202ENST00000556620 MSH5O43196 834 aa16.69■□□□□ 0.26
AL049875.1-202ENST00000556620 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
AL049875.1-202ENST00000556620 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
AL049875.1-202ENST00000556620 ADRA2BP18089 450 aa16.65■□□□□ 0.26
AL049875.1-202ENST00000556620 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
AL049875.1-202ENST00000556620 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
AL049875.1-202ENST00000556620 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
AL049875.1-202ENST00000556620 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
AL049875.1-202ENST00000556620 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
AL049875.1-202ENST00000556620 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
AL049875.1-202ENST00000556620 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
AL049875.1-202ENST00000556620 KCNA4P22459 653 aa14.69□□□□□ -0.06
AL049875.1-202ENST00000556620 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
AL049875.1-202ENST00000556620 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
AL049875.1-202ENST00000556620 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
AL049875.1-202ENST00000556620 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
AL049875.1-202ENST00000556620 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
AL049875.1-202ENST00000556620 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
AL049875.1-202ENST00000556620 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
AL049875.1-202ENST00000556620 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
AL049875.1-202ENST00000556620 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
AL049875.1-202ENST00000556620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
AL049875.1-202ENST00000556620 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
AL049875.1-202ENST00000556620 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
AL049875.1-202ENST00000556620 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
AL049875.1-202ENST00000556620 ZBTB22O15209 634 aa13.51□□□□□ -0.25
AL049875.1-202ENST00000556620 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
AL049875.1-202ENST00000556620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
AL049875.1-202ENST00000556620 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
AL049875.1-202ENST00000556620 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
AL049875.1-202ENST00000556620 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
AL049875.1-202ENST00000556620 CAPN15O75808 1086 aa13.4□□□□□ -0.26
AL049875.1-202ENST00000556620 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
AL049875.1-202ENST00000556620 APLP2Q06481 763 aa13.37□□□□□ -0.27
AL049875.1-202ENST00000556620 DSG3P32926 999 aa13.34□□□□□ -0.27
AL049875.1-202ENST00000556620 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
AL049875.1-202ENST00000556620 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
AL049875.1-202ENST00000556620 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
AL049875.1-202ENST00000556620 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
AL049875.1-202ENST00000556620 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
AL049875.1-202ENST00000556620 ABCB7O75027 752 aa13.1□□□□□ -0.31
AL049875.1-202ENST00000556620 POLA2Q14181 598 aa12.93□□□□□ -0.34
AL049875.1-202ENST00000556620 POTEHQ6S545 545 aa12.79□□□□□ -0.36
AL049875.1-202ENST00000556620 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
AL049875.1-202ENST00000556620 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
AL049875.1-202ENST00000556620 FBLN2P98095 1184 aa12.62□□□□□ -0.39
AL049875.1-202ENST00000556620 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
AL049875.1-202ENST00000556620 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
AL049875.1-202ENST00000556620 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
AL049875.1-202ENST00000556620 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
AL049875.1-202ENST00000556620 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
AL049875.1-202ENST00000556620 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
AL049875.1-202ENST00000556620 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
AL049875.1-202ENST00000556620 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
AL049875.1-202ENST00000556620 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
AL049875.1-202ENST00000556620 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
AL049875.1-202ENST00000556620 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
AL049875.1-202ENST00000556620 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
AL049875.1-202ENST00000556620 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
AL049875.1-202ENST00000556620 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
AL049875.1-202ENST00000556620 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
AL049875.1-202ENST00000556620 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
AL049875.1-202ENST00000556620 FKBP8Q14318 412 aa12.03□□□□□ -0.48
AL049875.1-202ENST00000556620 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
AL049875.1-202ENST00000556620 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
AL049875.1-202ENST00000556620 PROM2Q8N271 834 aa11.95□□□□□ -0.5
AL049875.1-202ENST00000556620 HAX1O00165 279 aa11.92□□□□□ -0.5
AL049875.1-202ENST00000556620 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
AL049875.1-202ENST00000556620 PRR29P0C7W0 189 aa11.86□□□□□ -0.51
AL049875.1-202ENST00000556620 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
AL049875.1-202ENST00000556620 EVX2Q03828 476 aa11.79□□□□□ -0.52
AL049875.1-202ENST00000556620 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
AL049875.1-202ENST00000556620 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
AL049875.1-202ENST00000556620 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
AL049875.1-202ENST00000556620 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
AL049875.1-202ENST00000556620 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
AL049875.1-202ENST00000556620 MIER1Q8N108 512 aa11.58□□□□□ -0.56
AL049875.1-202ENST00000556620 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
AL049875.1-202ENST00000556620 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
AL049875.1-202ENST00000556620 GABBR2O75899 941 aa11.53□□□□□ -0.56
AL049875.1-202ENST00000556620 VASPP50552 380 aaPredicted RBP11.52□□□□□ -0.57
AL049875.1-202ENST00000556620 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
AL049875.1-202ENST00000556620 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
AL049875.1-202ENST00000556620 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
AL049875.1-202ENST00000556620 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
AL049875.1-202ENST00000556620 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
AL049875.1-202ENST00000556620 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
AL049875.1-202ENST00000556620 CLCN6P51797 869 aa11.33□□□□□ -0.6
AL049875.1-202ENST00000556620 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
AL049875.1-202ENST00000556620 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
AL049875.1-202ENST00000556620 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
AL049875.1-202ENST00000556620 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
AL049875.1-202ENST00000556620 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
AL049875.1-202ENST00000556620 NUBP1P53384 320 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms