RNA–Protein interactions for RNA: ENST00000556616.5

PRMT5-223, Transcript of protein arginine methyltransferase 5, human

TSL 4

Gene PRMT5, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRMT5-223	ENST00000556616	CHIC1	Q5VXU3	224 aa		21.17	■□□□□ 0.98
PRMT5-223	ENST00000556616	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.93	■□□□□ 0.94
PRMT5-223	ENST00000556616	PHF23	Q9BUL5	403 aa	Predicted RBP	18.74	■□□□□ 0.59
PRMT5-223	ENST00000556616	SENP3	Q9H4L4	574 aa	Predicted RBP	17.59	■□□□□ 0.41
PRMT5-223	ENST00000556616	PLPPR3	Q6T4P5	718 aa		17.51	■□□□□ 0.39
PRMT5-223	ENST00000556616	NISCH	Q9Y2I1	1504 aa		16.74	■□□□□ 0.27
PRMT5-223	ENST00000556616	ADRA2B	P18089	450 aa		16.41	■□□□□ 0.22
PRMT5-223	ENST00000556616	PPP6R1	Q9UPN7	881 aa		16.28	■□□□□ 0.2
PRMT5-223	ENST00000556616	FOXD1	Q16676	465 aa		16.26	■□□□□ 0.19
PRMT5-223	ENST00000556616	KCNA4	P22459	653 aa		16.05	■□□□□ 0.16
PRMT5-223	ENST00000556616	EHMT2	Q96KQ7	1210 aa		15.81	■□□□□ 0.12
PRMT5-223	ENST00000556616	PPP4R3CP	Q6ZMV5	832 aa		15.54	■□□□□ 0.08
PRMT5-223	ENST00000556616	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.47	■□□□□ 0.07
PRMT5-223	ENST00000556616	SLC4A1AP	Q9BWU0	796 aa	Known RBP	15.4	■□□□□ 0.06
PRMT5-223	ENST00000556616	CSRNP3	Q8WYN3	585 aa		15.36	■□□□□ 0.05
PRMT5-223	ENST00000556616	NCBP3	Q53F19	620 aa	Known RBP	15.34	■□□□□ 0.05
PRMT5-223	ENST00000556616	NPM3	O75607	178 aa	Known RBP	15.14	■□□□□ 0.01
PRMT5-223	ENST00000556616	CNKSR2	Q8WXI2	1034 aa		14.93	□□□□□ -0.02
PRMT5-223	ENST00000556616	SCAF1	Q9H7N4	1312 aa	Known RBP	14.88	□□□□□ -0.03
PRMT5-223	ENST00000556616	ZBTB22	O15209	634 aa		14.79	□□□□□ -0.04
PRMT5-223	ENST00000556616	MSH5	O43196	834 aa		14.66	□□□□□ -0.06
PRMT5-223	ENST00000556616	DNAJC5B	Q9UF47	199 aa		14.66	□□□□□ -0.06
PRMT5-223	ENST00000556616	CCDC180	Q9P1Z9	1646 aa		14.62	□□□□□ -0.07
PRMT5-223	ENST00000556616	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.56	□□□□□ -0.08
PRMT5-223	ENST00000556616	FOXD4L1	Q9NU39	408 aa		14.53	□□□□□ -0.08
PRMT5-223	ENST00000556616	RNF216	Q9NWF9	866 aa	Predicted RBP	14.46	□□□□□ -0.09
PRMT5-223	ENST00000556616	HOXD11	P31277	338 aa	Predicted RBP	14.21	□□□□□ -0.13
PRMT5-223	ENST00000556616	DMRT2	Q9Y5R5	561 aa		14.19	□□□□□ -0.14
PRMT5-223	ENST00000556616	SLC4A2	P04920	1241 aa		14.13	□□□□□ -0.15
PRMT5-223	ENST00000556616	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.1	□□□□□ -0.15
PRMT5-223	ENST00000556616	ATXN8OS	P0DMR3	200 aa		14	□□□□□ -0.17
PRMT5-223	ENST00000556616	MYCN	P04198	464 aa	Predicted RBP	13.94	□□□□□ -0.18
PRMT5-223	ENST00000556616	DCAF1	Q9Y4B6	1507 aa		13.93	□□□□□ -0.18
PRMT5-223	ENST00000556616	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.91	□□□□□ -0.18
PRMT5-223	ENST00000556616	RTN4	Q9NQC3	1192 aa	Known RBP	13.91	□□□□□ -0.18
PRMT5-223	ENST00000556616	SLC24A1	O60721	1099 aa		13.8	□□□□□ -0.2
PRMT5-223	ENST00000556616	MYO15B	Q96JP2	1530 aa		13.78	□□□□□ -0.2
PRMT5-223	ENST00000556616	FKBP8	Q14318	412 aa		13.77	□□□□□ -0.21
PRMT5-223	ENST00000556616	ABCC9	O60706	1549 aa		13.6	□□□□□ -0.23
PRMT5-223	ENST00000556616	NACAD	O15069	1562 aa		13.58	□□□□□ -0.24
PRMT5-223	ENST00000556616	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.55	□□□□□ -0.24
PRMT5-223	ENST00000556616	DCAF8L2	P0C7V8	631 aa		13.5	□□□□□ -0.25
PRMT5-223	ENST00000556616	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.49	□□□□□ -0.25	2e-9	■□□□□ 9.7
PRMT5-223	ENST00000556616	SHROOM4	Q9ULL8	1493 aa		13.47	□□□□□ -0.25
PRMT5-223	ENST00000556616	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.46	□□□□□ -0.25
PRMT5-223	ENST00000556616	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.46	□□□□□ -0.25
PRMT5-223	ENST00000556616	DCAF8L1	A6NGE4	600 aa		13.45	□□□□□ -0.26
PRMT5-223	ENST00000556616	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.45	□□□□□ -0.26
PRMT5-223	ENST00000556616	RB1CC1	Q8TDY2	1594 aa		13.41	□□□□□ -0.26
PRMT5-223	ENST00000556616		U3KPZ7	1027 aa	Predicted RBP	13.39	□□□□□ -0.27
PRMT5-223	ENST00000556616	SCRIB	Q14160	1630 aa		13.31	□□□□□ -0.28
PRMT5-223	ENST00000556616	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.23	□□□□□ -0.29
PRMT5-223	ENST00000556616	UNC13A	Q9UPW8	1703 aa		13.12	□□□□□ -0.31
PRMT5-223	ENST00000556616	APLP2	Q06481	763 aa		13.11	□□□□□ -0.31
PRMT5-223	ENST00000556616	FBXO3	Q9UK99	471 aa		13.09	□□□□□ -0.31
PRMT5-223	ENST00000556616	BICRA	Q9NZM4	1560 aa		13.05	□□□□□ -0.32
PRMT5-223	ENST00000556616	SPDYE4	A6NLX3	237 aa		13.04	□□□□□ -0.32
PRMT5-223	ENST00000556616	MKRN4P	Q13434	485 aa	Predicted RBP	13.01	□□□□□ -0.33
PRMT5-223	ENST00000556616	PROM2	Q8N271	834 aa		13	□□□□□ -0.33
PRMT5-223	ENST00000556616	RSF1	Q96T23	1441 aa	Predicted RBP	12.98	□□□□□ -0.33
PRMT5-223	ENST00000556616	SUPT5H	O00267	1087 aa	Known RBP	12.97	□□□□□ -0.33
PRMT5-223	ENST00000556616	CECR2	Q9BXF3	1484 aa		12.96	□□□□□ -0.34
PRMT5-223	ENST00000556616	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.91	□□□□□ -0.34
PRMT5-223	ENST00000556616	MROH2B	Q7Z745	1585 aa		12.9	□□□□□ -0.34
PRMT5-223	ENST00000556616	VASP	P50552	380 aa	Predicted RBP	12.89	□□□□□ -0.35
PRMT5-223	ENST00000556616	FBLN2	P98095	1184 aa		12.88	□□□□□ -0.35
PRMT5-223	ENST00000556616	SMARCA4	P51532	1647 aa		12.84	□□□□□ -0.35
PRMT5-223	ENST00000556616	PLCB2	Q00722	1185 aa		12.83	□□□□□ -0.36
PRMT5-223	ENST00000556616	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.8	□□□□□ -0.36
PRMT5-223	ENST00000556616	TRH	P20396	242 aa	Predicted RBP	12.79	□□□□□ -0.36
PRMT5-223	ENST00000556616	POLA2	Q14181	598 aa		12.79	□□□□□ -0.36
PRMT5-223	ENST00000556616	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
PRMT5-223	ENST00000556616	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.78	□□□□□ -0.36
PRMT5-223	ENST00000556616	PEG3	Q9GZU2	1588 aa		12.77	□□□□□ -0.36
PRMT5-223	ENST00000556616	WIZ	O95785	1651 aa		12.77	□□□□□ -0.36
PRMT5-223	ENST00000556616	TOP2A	P11388	1531 aa	Known RBP	12.7	□□□□□ -0.38
PRMT5-223	ENST00000556616	PKD2	Q13563	968 aa		12.68	□□□□□ -0.38
PRMT5-223	ENST00000556616	RNF39	Q9H2S5	420 aa		12.67	□□□□□ -0.38
PRMT5-223	ENST00000556616	CAPN15	O75808	1086 aa		12.66	□□□□□ -0.38
PRMT5-223	ENST00000556616	ATAD2B	Q9ULI0	1458 aa		12.62	□□□□□ -0.39
PRMT5-223	ENST00000556616	SMARCA2	P51531	1590 aa		12.61	□□□□□ -0.39
PRMT5-223	ENST00000556616	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.61	□□□□□ -0.39
PRMT5-223	ENST00000556616	EIF4G1	Q04637	1599 aa	Known RBP	12.6	□□□□□ -0.39
PRMT5-223	ENST00000556616	HAP1	P54257	671 aa	Predicted RBP	12.6	□□□□□ -0.39
PRMT5-223	ENST00000556616	C1QBP	Q07021	282 aa	Known RBP	12.55	□□□□□ -0.4
PRMT5-223	ENST00000556616	NCAPD3	P42695	1498 aa		12.54	□□□□□ -0.4
PRMT5-223	ENST00000556616	CCDC88B	A6NC98	1476 aa		12.53	□□□□□ -0.4
PRMT5-223	ENST00000556616	HMGXB3	Q12766	1538 aa		12.53	□□□□□ -0.4
PRMT5-223	ENST00000556616	VSIG10	Q8N0Z9	540 aa		12.5	□□□□□ -0.41
PRMT5-223	ENST00000556616	SPOCK2	Q92563	424 aa		12.5	□□□□□ -0.41
PRMT5-223	ENST00000556616	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.5	□□□□□ -0.41
PRMT5-223	ENST00000556616	ABCB7	O75027	752 aa		12.49	□□□□□ -0.41
PRMT5-223	ENST00000556616	KLHL34	Q8N239	644 aa		12.47	□□□□□ -0.41
PRMT5-223	ENST00000556616	STAG3	Q9UJ98	1225 aa		12.45	□□□□□ -0.42
PRMT5-223	ENST00000556616	BBX	Q8WY36	941 aa	Predicted RBP	12.43	□□□□□ -0.42
PRMT5-223	ENST00000556616	BCAN	Q96GW7	911 aa		12.43	□□□□□ -0.42
PRMT5-223	ENST00000556616	ZNF692	Q9BU19	519 aa	Predicted RBP	12.42	□□□□□ -0.42
PRMT5-223	ENST00000556616	ECM2	O94769	699 aa	Predicted RBP	12.41	□□□□□ -0.42
PRMT5-223	ENST00000556616	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.39	□□□□□ -0.43
PRMT5-223	ENST00000556616	NPM1	P06748	294 aa	Known RBP eCLIP	12.38	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms