RNA–Protein interactions for RNA: ENST00000556233.2

AL121839.1-201, humanhuman

BASIC

Gene AL121839.1, Length 1,185 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL121839.1-201ENST00000556233 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
AL121839.1-201ENST00000556233 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
AL121839.1-201ENST00000556233 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
AL121839.1-201ENST00000556233 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
AL121839.1-201ENST00000556233 FOXD1Q16676 465 aa19.16■□□□□ 0.66
AL121839.1-201ENST00000556233 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
AL121839.1-201ENST00000556233 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
AL121839.1-201ENST00000556233 MSH5O43196 834 aa17.99■□□□□ 0.47
AL121839.1-201ENST00000556233 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
AL121839.1-201ENST00000556233 PIAS4Q8N2W9 510 aaPredicted RBP17.95■□□□□ 0.46
AL121839.1-201ENST00000556233 ADRA2BP18089 450 aa17.93■□□□□ 0.46
AL121839.1-201ENST00000556233 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
AL121839.1-201ENST00000556233 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
AL121839.1-201ENST00000556233 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
AL121839.1-201ENST00000556233 PPP4R3CPQ6ZMV5 832 aa16.24■□□□□ 0.19
AL121839.1-201ENST00000556233 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
AL121839.1-201ENST00000556233 HOXD11P31277 338 aaPredicted RBP15.86■□□□□ 0.13
AL121839.1-201ENST00000556233 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
AL121839.1-201ENST00000556233 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
AL121839.1-201ENST00000556233 DCAF8L1A6NGE4 600 aa15.64■□□□□ 0.09
AL121839.1-201ENST00000556233 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
AL121839.1-201ENST00000556233 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
AL121839.1-201ENST00000556233 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
AL121839.1-201ENST00000556233 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
AL121839.1-201ENST00000556233 KCNA4P22459 653 aa15.18■□□□□ 0.02
AL121839.1-201ENST00000556233 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
AL121839.1-201ENST00000556233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.08■□□□□ 0
AL121839.1-201ENST00000556233 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
AL121839.1-201ENST00000556233 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
AL121839.1-201ENST00000556233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
AL121839.1-201ENST00000556233 APLP2Q06481 763 aa14.5□□□□□ -0.09
AL121839.1-201ENST00000556233 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
AL121839.1-201ENST00000556233 CAPN15O75808 1086 aa14.47□□□□□ -0.09
AL121839.1-201ENST00000556233 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
AL121839.1-201ENST00000556233 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
AL121839.1-201ENST00000556233 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
AL121839.1-201ENST00000556233 DSG3P32926 999 aa14.36□□□□□ -0.11
AL121839.1-201ENST00000556233 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
AL121839.1-201ENST00000556233 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
AL121839.1-201ENST00000556233 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
AL121839.1-201ENST00000556233 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
AL121839.1-201ENST00000556233 POTEHQ6S545 545 aa14.19□□□□□ -0.14
AL121839.1-201ENST00000556233 ABCB7O75027 752 aa14.09□□□□□ -0.15
AL121839.1-201ENST00000556233 ZBTB22O15209 634 aa13.92□□□□□ -0.18
AL121839.1-201ENST00000556233 POLA2Q14181 598 aa13.92□□□□□ -0.18
AL121839.1-201ENST00000556233 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
AL121839.1-201ENST00000556233 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
AL121839.1-201ENST00000556233 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
AL121839.1-201ENST00000556233 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
AL121839.1-201ENST00000556233 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
AL121839.1-201ENST00000556233 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
AL121839.1-201ENST00000556233 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
AL121839.1-201ENST00000556233 FBLN2P98095 1184 aa13.43□□□□□ -0.26
AL121839.1-201ENST00000556233 OSCARQ8IYS5 282 aa13.43□□□□□ -0.26
AL121839.1-201ENST00000556233 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
AL121839.1-201ENST00000556233 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
AL121839.1-201ENST00000556233 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
AL121839.1-201ENST00000556233 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
AL121839.1-201ENST00000556233 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
AL121839.1-201ENST00000556233 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
AL121839.1-201ENST00000556233 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
AL121839.1-201ENST00000556233 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
AL121839.1-201ENST00000556233 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
AL121839.1-201ENST00000556233 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
AL121839.1-201ENST00000556233 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
AL121839.1-201ENST00000556233 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
AL121839.1-201ENST00000556233 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
AL121839.1-201ENST00000556233 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
AL121839.1-201ENST00000556233 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
AL121839.1-201ENST00000556233 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
AL121839.1-201ENST00000556233 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
AL121839.1-201ENST00000556233 HAX1O00165 279 aa12.79□□□□□ -0.36
AL121839.1-201ENST00000556233 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
AL121839.1-201ENST00000556233 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
AL121839.1-201ENST00000556233 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
AL121839.1-201ENST00000556233 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
AL121839.1-201ENST00000556233 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
AL121839.1-201ENST00000556233 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
AL121839.1-201ENST00000556233 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
AL121839.1-201ENST00000556233 EVX2Q03828 476 aa12.57□□□□□ -0.4
AL121839.1-201ENST00000556233 FARP1Q9Y4F1 1045 aaPredicted RBP12.53□□□□□ -0.4
AL121839.1-201ENST00000556233 PROM2Q8N271 834 aa12.47□□□□□ -0.41
AL121839.1-201ENST00000556233 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
AL121839.1-201ENST00000556233 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
AL121839.1-201ENST00000556233 CLCN6P51797 869 aa12.39□□□□□ -0.43
AL121839.1-201ENST00000556233 GABBR2O75899 941 aa12.37□□□□□ -0.43
AL121839.1-201ENST00000556233 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
AL121839.1-201ENST00000556233 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
AL121839.1-201ENST00000556233 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
AL121839.1-201ENST00000556233 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
AL121839.1-201ENST00000556233 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
AL121839.1-201ENST00000556233 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
AL121839.1-201ENST00000556233 FKBP8Q14318 412 aa12.18□□□□□ -0.46
AL121839.1-201ENST00000556233 MIER1Q8N108 512 aa12.14□□□□□ -0.47
AL121839.1-201ENST00000556233 DCBLD2Q96PD2 775 aa12.09□□□□□ -0.47
AL121839.1-201ENST00000556233 LHX8Q68G74 356 aa12.08□□□□□ -0.48
AL121839.1-201ENST00000556233 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
AL121839.1-201ENST00000556233 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
AL121839.1-201ENST00000556233 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
AL121839.1-201ENST00000556233 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms