RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, humanhuman

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-212ENST00000556029 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
TMPO-212ENST00000556029 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
TMPO-212ENST00000556029 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
TMPO-212ENST00000556029 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
TMPO-212ENST00000556029 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.86
TMPO-212ENST00000556029 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
TMPO-212ENST00000556029 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
TMPO-212ENST00000556029 EHMT2Q96KQ7 1210 aa20■□□□□ 0.79
TMPO-212ENST00000556029 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
TMPO-212ENST00000556029 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
TMPO-212ENST00000556029 HRCP23327 699 aa19.72■□□□□ 0.75
TMPO-212ENST00000556029 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
TMPO-212ENST00000556029 ABCC9O60706 1549 aa19.66■□□□□ 0.74
TMPO-212ENST00000556029 FAM9AQ8IZU1 332 aaPredicted RBP19.66■□□□□ 0.74
TMPO-212ENST00000556029 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
TMPO-212ENST00000556029 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
TMPO-212ENST00000556029 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
TMPO-212ENST00000556029 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
TMPO-212ENST00000556029 TRIM26Q12899 539 aaPredicted RBP19.3■□□□□ 0.68
TMPO-212ENST00000556029 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
TMPO-212ENST00000556029 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
TMPO-212ENST00000556029 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
TMPO-212ENST00000556029 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
TMPO-212ENST00000556029 ZEB1P37275 1124 aaPredicted RBP19.01■□□□□ 0.63
TMPO-212ENST00000556029 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
TMPO-212ENST00000556029 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
TMPO-212ENST00000556029 CECR2Q9BXF3 1484 aa18.89■□□□□ 0.62
TMPO-212ENST00000556029 NACADO15069 1562 aa18.89■□□□□ 0.62
TMPO-212ENST00000556029 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.61
TMPO-212ENST00000556029 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
TMPO-212ENST00000556029 APLP2Q06481 763 aa18.77■□□□□ 0.59
TMPO-212ENST00000556029 WIZO95785 1651 aa18.68■□□□□ 0.58
TMPO-212ENST00000556029 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
TMPO-212ENST00000556029 YTHDC1Q96MU7 727 aaKnown RBP18.62■□□□□ 0.57
TMPO-212ENST00000556029 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
TMPO-212ENST00000556029 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
TMPO-212ENST00000556029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
TMPO-212ENST00000556029 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
TMPO-212ENST00000556029 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
TMPO-212ENST00000556029 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
TMPO-212ENST00000556029 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
TMPO-212ENST00000556029 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
TMPO-212ENST00000556029 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
TMPO-212ENST00000556029 SMARCA4P51532 1647 aa18.33■□□□□ 0.53
TMPO-212ENST00000556029 CEP162Q5TB80 1403 aa18.33■□□□□ 0.52
TMPO-212ENST00000556029 SOGA1O94964 1423 aa18.31■□□□□ 0.52
TMPO-212ENST00000556029 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
TMPO-212ENST00000556029 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
TMPO-212ENST00000556029 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
TMPO-212ENST00000556029 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
TMPO-212ENST00000556029 EEA1Q15075 1411 aa18.24■□□□□ 0.51
TMPO-212ENST00000556029 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
TMPO-212ENST00000556029 ITGAEP38570 1179 aa18.19■□□□□ 0.5
TMPO-212ENST00000556029 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
TMPO-212ENST00000556029 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
TMPO-212ENST00000556029 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
TMPO-212ENST00000556029 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
TMPO-212ENST00000556029 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
TMPO-212ENST00000556029 NEFLP07196 543 aa18.06■□□□□ 0.48
TMPO-212ENST00000556029 MYT1Q01538 1121 aa18.05■□□□□ 0.48
TMPO-212ENST00000556029 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
TMPO-212ENST00000556029 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
TMPO-212ENST00000556029 ZNF316A6NFI3 1004 aaPredicted RBP18.03■□□□□ 0.48
TMPO-212ENST00000556029 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
TMPO-212ENST00000556029 CLIP1P30622 1438 aa18.02■□□□□ 0.48
TMPO-212ENST00000556029 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
TMPO-212ENST00000556029 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
TMPO-212ENST00000556029 GTF3C3Q9Y5Q9 886 aa17.97■□□□□ 0.47
TMPO-212ENST00000556029 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
TMPO-212ENST00000556029 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
TMPO-212ENST00000556029 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
TMPO-212ENST00000556029 SYNJ1O43426 1573 aa17.88■□□□□ 0.45
TMPO-212ENST00000556029 VPS8Q8N3P4 1428 aa17.87■□□□□ 0.45
TMPO-212ENST00000556029 RAPGEF2Q9Y4G8 1499 aa17.83■□□□□ 0.45
TMPO-212ENST00000556029 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
TMPO-212ENST00000556029 KIF21BO75037 1637 aa17.82■□□□□ 0.44
TMPO-212ENST00000556029 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
TMPO-212ENST00000556029 FBLN2P98095 1184 aa17.78■□□□□ 0.44
TMPO-212ENST00000556029 ARID3CA6NKF2 412 aa17.77■□□□□ 0.44
TMPO-212ENST00000556029 MIER1Q8N108 512 aa17.76■□□□□ 0.43
TMPO-212ENST00000556029 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
TMPO-212ENST00000556029 KIF27Q86VH2 1401 aa17.64■□□□□ 0.41
TMPO-212ENST00000556029 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
TMPO-212ENST00000556029 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
TMPO-212ENST00000556029 BCANQ96GW7 911 aa17.6■□□□□ 0.41
TMPO-212ENST00000556029 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
TMPO-212ENST00000556029 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
TMPO-212ENST00000556029 PRXQ9BXM0 1461 aa17.55■□□□□ 0.4
TMPO-212ENST00000556029 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
TMPO-212ENST00000556029 DHX57Q6P158 1386 aaKnown RBP17.52■□□□□ 0.4
TMPO-212ENST00000556029 ARAP1Q96P48 1450 aa17.52■□□□□ 0.4
TMPO-212ENST00000556029 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.39
TMPO-212ENST00000556029 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
TMPO-212ENST00000556029 DAXXQ9UER7 740 aaPredicted RBP17.51■□□□□ 0.39
TMPO-212ENST00000556029 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
TMPO-212ENST00000556029 CUX1P39880 1505 aa17.48■□□□□ 0.39
TMPO-212ENST00000556029 CCNB3Q8WWL7 1395 aa17.48■□□□□ 0.39
TMPO-212ENST00000556029 CUX2O14529 1486 aa17.45■□□□□ 0.38
TMPO-212ENST00000556029 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
TMPO-212ENST00000556029 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms