RNA–Protein interactions for RNA: ENST00000555980.1

AC006530.1-201, humanhuman

BASIC

Gene AC006530.1, Length 571 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006530.1-201ENST00000555980 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
AC006530.1-201ENST00000555980 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
AC006530.1-201ENST00000555980 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
AC006530.1-201ENST00000555980 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
AC006530.1-201ENST00000555980 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
AC006530.1-201ENST00000555980 FOXD1Q16676 465 aa17.69■□□□□ 0.42
AC006530.1-201ENST00000555980 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
AC006530.1-201ENST00000555980 ADRA2BP18089 450 aa17.03■□□□□ 0.32
AC006530.1-201ENST00000555980 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
AC006530.1-201ENST00000555980 MSH5O43196 834 aa16.3■□□□□ 0.2
AC006530.1-201ENST00000555980 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
AC006530.1-201ENST00000555980 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
AC006530.1-201ENST00000555980 KCNA4P22459 653 aa15.46■□□□□ 0.07
AC006530.1-201ENST00000555980 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
AC006530.1-201ENST00000555980 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
AC006530.1-201ENST00000555980 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
AC006530.1-201ENST00000555980 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
AC006530.1-201ENST00000555980 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
AC006530.1-201ENST00000555980 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
AC006530.1-201ENST00000555980 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
AC006530.1-201ENST00000555980 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
AC006530.1-201ENST00000555980 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
AC006530.1-201ENST00000555980 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
AC006530.1-201ENST00000555980 DCAF8L1A6NGE4 600 aa14.46□□□□□ -0.09
AC006530.1-201ENST00000555980 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
AC006530.1-201ENST00000555980 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
AC006530.1-201ENST00000555980 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
AC006530.1-201ENST00000555980 ZBTB22O15209 634 aa14.23□□□□□ -0.13
AC006530.1-201ENST00000555980 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
AC006530.1-201ENST00000555980 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
AC006530.1-201ENST00000555980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
AC006530.1-201ENST00000555980 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
AC006530.1-201ENST00000555980 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
AC006530.1-201ENST00000555980 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
AC006530.1-201ENST00000555980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
AC006530.1-201ENST00000555980 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
AC006530.1-201ENST00000555980 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
AC006530.1-201ENST00000555980 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
AC006530.1-201ENST00000555980 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
AC006530.1-201ENST00000555980 APLP2Q06481 763 aa13.7□□□□□ -0.22
AC006530.1-201ENST00000555980 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
AC006530.1-201ENST00000555980 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
AC006530.1-201ENST00000555980 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
AC006530.1-201ENST00000555980 CAPN15O75808 1086 aa13.49□□□□□ -0.25
AC006530.1-201ENST00000555980 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
AC006530.1-201ENST00000555980 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
AC006530.1-201ENST00000555980 DSG3P32926 999 aa13.31□□□□□ -0.28
AC006530.1-201ENST00000555980 POLA2Q14181 598 aa13.27□□□□□ -0.29
AC006530.1-201ENST00000555980 ABCB7O75027 752 aa13.21□□□□□ -0.29
AC006530.1-201ENST00000555980 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
AC006530.1-201ENST00000555980 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
AC006530.1-201ENST00000555980 FBLN2P98095 1184 aa13.03□□□□□ -0.32
AC006530.1-201ENST00000555980 FKBP8Q14318 412 aa12.79□□□□□ -0.36
AC006530.1-201ENST00000555980 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
AC006530.1-201ENST00000555980 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
AC006530.1-201ENST00000555980 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
AC006530.1-201ENST00000555980 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
AC006530.1-201ENST00000555980 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
AC006530.1-201ENST00000555980 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
AC006530.1-201ENST00000555980 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
AC006530.1-201ENST00000555980 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
AC006530.1-201ENST00000555980 PROM2Q8N271 834 aa12.64□□□□□ -0.39
AC006530.1-201ENST00000555980 CCDC180Q9P1Z9 1646 aa12.57□□□□□ -0.4
AC006530.1-201ENST00000555980 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
AC006530.1-201ENST00000555980 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC006530.1-201ENST00000555980 REM2Q8IYK8 340 aaPredicted RBP12.41□□□□□ -0.42
AC006530.1-201ENST00000555980 ABCC9O60706 1549 aa12.38□□□□□ -0.43
AC006530.1-201ENST00000555980 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
AC006530.1-201ENST00000555980 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
AC006530.1-201ENST00000555980 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
AC006530.1-201ENST00000555980 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
AC006530.1-201ENST00000555980 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
AC006530.1-201ENST00000555980 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
AC006530.1-201ENST00000555980 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
AC006530.1-201ENST00000555980 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
AC006530.1-201ENST00000555980 MIER1Q8N108 512 aa12.08□□□□□ -0.48
AC006530.1-201ENST00000555980 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
AC006530.1-201ENST00000555980 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
AC006530.1-201ENST00000555980 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
AC006530.1-201ENST00000555980 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
AC006530.1-201ENST00000555980 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
AC006530.1-201ENST00000555980 PLEKHG5O94827 1062 aa12□□□□□ -0.49
AC006530.1-201ENST00000555980 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
AC006530.1-201ENST00000555980 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
AC006530.1-201ENST00000555980 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
AC006530.1-201ENST00000555980 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
AC006530.1-201ENST00000555980 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
AC006530.1-201ENST00000555980 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
AC006530.1-201ENST00000555980 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
AC006530.1-201ENST00000555980 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
AC006530.1-201ENST00000555980 NACADO15069 1562 aa11.84□□□□□ -0.51
AC006530.1-201ENST00000555980 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
AC006530.1-201ENST00000555980 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
AC006530.1-201ENST00000555980 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC006530.1-201ENST00000555980 NUBP1P53384 320 aa11.81□□□□□ -0.52
AC006530.1-201ENST00000555980 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
AC006530.1-201ENST00000555980 MYO15BQ96JP2 1530 aa11.76□□□□□ -0.53
AC006530.1-201ENST00000555980 DCAF1Q9Y4B6 1507 aa11.74□□□□□ -0.53
AC006530.1-201ENST00000555980 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
AC006530.1-201ENST00000555980 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms