RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-210ENST00000555718 AEBP2Q6ZN18 517 aaPredicted RBP32.45■■■□□ 2.79
PPP4R3A-210ENST00000555718 CHIC1Q5VXU3 224 aa31.34■■■□□ 2.61
PPP4R3A-210ENST00000555718 PHF23Q9BUL5 403 aaPredicted RBP27.65■■■□□ 2.02
PPP4R3A-210ENST00000555718 SENP3Q9H4L4 574 aaPredicted RBP27.39■■□□□ 1.98
PPP4R3A-210ENST00000555718 FOXD1Q16676 465 aa25.56■■□□□ 1.68
PPP4R3A-210ENST00000555718 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
PPP4R3A-210ENST00000555718 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
PPP4R3A-210ENST00000555718 ADRA2BP18089 450 aa24.42■■□□□ 1.5
PPP4R3A-210ENST00000555718 PIAS4Q8N2W9 510 aaPredicted RBP24■■□□□ 1.43
PPP4R3A-210ENST00000555718 MSH5O43196 834 aa23.52■■□□□ 1.36
PPP4R3A-210ENST00000555718 PPP4R3CPQ6ZMV5 832 aa22.3■■□□□ 1.16
PPP4R3A-210ENST00000555718 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
PPP4R3A-210ENST00000555718 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
PPP4R3A-210ENST00000555718 POTEDQ86YR6 584 aa21.95■■□□□ 1.1
PPP4R3A-210ENST00000555718 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
PPP4R3A-210ENST00000555718 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
PPP4R3A-210ENST00000555718 KCNA4P22459 653 aa21.6■■□□□ 1.05
PPP4R3A-210ENST00000555718 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
PPP4R3A-210ENST00000555718 NPM3O75607 178 aaKnown RBP21.37■■□□□ 1.01
PPP4R3A-210ENST00000555718 HOXD11P31277 338 aaPredicted RBP21.32■■□□□ 1
PPP4R3A-210ENST00000555718 RNF216Q9NWF9 866 aaPredicted RBP21.31■■□□□ 1
PPP4R3A-210ENST00000555718 DCAF8L1A6NGE4 600 aa20.94■□□□□ 0.94
PPP4R3A-210ENST00000555718 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
PPP4R3A-210ENST00000555718 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
PPP4R3A-210ENST00000555718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.843e-7■□□□□ 8.9
PPP4R3A-210ENST00000555718 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
PPP4R3A-210ENST00000555718 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
PPP4R3A-210ENST00000555718 U3KPZ7 1027 aaPredicted RBP20.03■□□□□ 0.8
PPP4R3A-210ENST00000555718 ZBTB22O15209 634 aa19.95■□□□□ 0.78
PPP4R3A-210ENST00000555718 C1QBPQ07021 282 aaKnown RBP19.88■□□□□ 0.77
PPP4R3A-210ENST00000555718 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
PPP4R3A-210ENST00000555718 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
PPP4R3A-210ENST00000555718 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
PPP4R3A-210ENST00000555718 MYCNP04198 464 aaPredicted RBP19.67■□□□□ 0.74
PPP4R3A-210ENST00000555718 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
PPP4R3A-210ENST00000555718 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
PPP4R3A-210ENST00000555718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
PPP4R3A-210ENST00000555718 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
PPP4R3A-210ENST00000555718 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
PPP4R3A-210ENST00000555718 CAPN15O75808 1086 aa19.41■□□□□ 0.7
PPP4R3A-210ENST00000555718 ATF5Q9Y2D1 282 aaPredicted RBP19.33■□□□□ 0.68
PPP4R3A-210ENST00000555718 APLP2Q06481 763 aa19.3■□□□□ 0.68
PPP4R3A-210ENST00000555718 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
PPP4R3A-210ENST00000555718 DSG3P32926 999 aa19.18■□□□□ 0.66
PPP4R3A-210ENST00000555718 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
PPP4R3A-210ENST00000555718 ATXN8OSP0DMR3 200 aa19.11■□□□□ 0.65
PPP4R3A-210ENST00000555718 ABCB7O75027 752 aa19.09■□□□□ 0.65
PPP4R3A-210ENST00000555718 POLA2Q14181 598 aa18.91■□□□□ 0.62
PPP4R3A-210ENST00000555718 MKRN4PQ13434 485 aaPredicted RBP18.45■□□□□ 0.54
PPP4R3A-210ENST00000555718 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
PPP4R3A-210ENST00000555718 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
PPP4R3A-210ENST00000555718 FBLN2P98095 1184 aa18.32■□□□□ 0.52
PPP4R3A-210ENST00000555718 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
PPP4R3A-210ENST00000555718 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
PPP4R3A-210ENST00000555718 SPDYE6P0CI01 402 aa18■□□□□ 0.47
PPP4R3A-210ENST00000555718 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
PPP4R3A-210ENST00000555718 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
PPP4R3A-210ENST00000555718 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
PPP4R3A-210ENST00000555718 SSUH2Q9Y2M2 353 aa17.9■□□□□ 0.46
PPP4R3A-210ENST00000555718 SPDYE4A6NLX3 237 aa17.83■□□□□ 0.44
PPP4R3A-210ENST00000555718 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
PPP4R3A-210ENST00000555718 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
PPP4R3A-210ENST00000555718 FKBP8Q14318 412 aa17.66■□□□□ 0.42
PPP4R3A-210ENST00000555718 PITPNM1O00562 1244 aa17.65■□□□□ 0.42
PPP4R3A-210ENST00000555718 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
PPP4R3A-210ENST00000555718 PROM2Q8N271 834 aa17.53■□□□□ 0.4
PPP4R3A-210ENST00000555718 SPDYE1Q8NFV5 336 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3A-210ENST00000555718 CLEC11AQ9Y240 323 aa17.5■□□□□ 0.39
PPP4R3A-210ENST00000555718 PIP4P2Q8N4L2 257 aa17.35■□□□□ 0.37
PPP4R3A-210ENST00000555718 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.364e-7■□□□□ 9.5
PPP4R3A-210ENST00000555718 POTEHQ6S545 545 aa17.3■□□□□ 0.36
PPP4R3A-210ENST00000555718 PRR29P0C7W0 189 aa17.27■□□□□ 0.36
PPP4R3A-210ENST00000555718 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
PPP4R3A-210ENST00000555718 CHADLQ6NUI6 762 aa17.18■□□□□ 0.34
PPP4R3A-210ENST00000555718 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
PPP4R3A-210ENST00000555718 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
PPP4R3A-210ENST00000555718 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
PPP4R3A-210ENST00000555718 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
PPP4R3A-210ENST00000555718 MNX1P50219 401 aaPredicted RBP16.91■□□□□ 0.3
PPP4R3A-210ENST00000555718 MIER1Q8N108 512 aa16.9■□□□□ 0.3
PPP4R3A-210ENST00000555718 VASPP50552 380 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3A-210ENST00000555718 PLCD3Q8N3E9 789 aa16.84■□□□□ 0.29
PPP4R3A-210ENST00000555718 HAX1O00165 279 aa16.79■□□□□ 0.28
PPP4R3A-210ENST00000555718 EVX2Q03828 476 aa16.78■□□□□ 0.28
PPP4R3A-210ENST00000555718 C19orf67A6NJJ6 358 aa16.75■□□□□ 0.27
PPP4R3A-210ENST00000555718 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
PPP4R3A-210ENST00000555718 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
PPP4R3A-210ENST00000555718 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-210ENST00000555718 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-210ENST00000555718 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
PPP4R3A-210ENST00000555718 NUBP1P53384 320 aa16.56■□□□□ 0.24
PPP4R3A-210ENST00000555718 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
PPP4R3A-210ENST00000555718 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
PPP4R3A-210ENST00000555718 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
PPP4R3A-210ENST00000555718 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
PPP4R3A-210ENST00000555718 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3A-210ENST00000555718 PHF12Q96QT6 1004 aa16.43■□□□□ 0.22
PPP4R3A-210ENST00000555718 ZNF579Q8NAF0 562 aaKnown RBP16.42■□□□□ 0.22
PPP4R3A-210ENST00000555718 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
PPP4R3A-210ENST00000555718 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms