RNA–Protein interactions for RNA: ENST00000555477.2

CKAP2P1-201, Transcript of cytoskeleton associated protein 2 pseudogene 1, humanhuman

BASIC

Gene CKAP2P1, Length 2,049 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2P1-201ENST00000555477 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
CKAP2P1-201ENST00000555477 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
CKAP2P1-201ENST00000555477 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
CKAP2P1-201ENST00000555477 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
CKAP2P1-201ENST00000555477 FOXD1Q16676 465 aa16.01■□□□□ 0.15
CKAP2P1-201ENST00000555477 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
CKAP2P1-201ENST00000555477 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
CKAP2P1-201ENST00000555477 ADRA2BP18089 450 aa15.24■□□□□ 0.03
CKAP2P1-201ENST00000555477 PIAS4Q8N2W9 510 aaPredicted RBP15.02□□□□□ -0.01
CKAP2P1-201ENST00000555477 MSH5O43196 834 aa14.78□□□□□ -0.04
CKAP2P1-201ENST00000555477 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
CKAP2P1-201ENST00000555477 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
CKAP2P1-201ENST00000555477 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
CKAP2P1-201ENST00000555477 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
CKAP2P1-201ENST00000555477 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
CKAP2P1-201ENST00000555477 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
CKAP2P1-201ENST00000555477 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
CKAP2P1-201ENST00000555477 KCNA4P22459 653 aa13.37□□□□□ -0.27
CKAP2P1-201ENST00000555477 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
CKAP2P1-201ENST00000555477 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
CKAP2P1-201ENST00000555477 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
CKAP2P1-201ENST00000555477 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
CKAP2P1-201ENST00000555477 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
CKAP2P1-201ENST00000555477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
CKAP2P1-201ENST00000555477 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
CKAP2P1-201ENST00000555477 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
CKAP2P1-201ENST00000555477 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
CKAP2P1-201ENST00000555477 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
CKAP2P1-201ENST00000555477 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
CKAP2P1-201ENST00000555477 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
CKAP2P1-201ENST00000555477 ZBTB22O15209 634 aa12.32□□□□□ -0.44
CKAP2P1-201ENST00000555477 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
CKAP2P1-201ENST00000555477 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
CKAP2P1-201ENST00000555477 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
CKAP2P1-201ENST00000555477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.19□□□□□ -0.46
CKAP2P1-201ENST00000555477 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
CKAP2P1-201ENST00000555477 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
CKAP2P1-201ENST00000555477 CAPN15O75808 1086 aa12.14□□□□□ -0.47
CKAP2P1-201ENST00000555477 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
CKAP2P1-201ENST00000555477 APLP2Q06481 763 aa12.09□□□□□ -0.47
CKAP2P1-201ENST00000555477 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
CKAP2P1-201ENST00000555477 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
CKAP2P1-201ENST00000555477 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
CKAP2P1-201ENST00000555477 DSG3P32926 999 aa12.01□□□□□ -0.49
CKAP2P1-201ENST00000555477 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
CKAP2P1-201ENST00000555477 ABCB7O75027 752 aa11.93□□□□□ -0.5
CKAP2P1-201ENST00000555477 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
CKAP2P1-201ENST00000555477 POLA2Q14181 598 aa11.81□□□□□ -0.52
CKAP2P1-201ENST00000555477 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
CKAP2P1-201ENST00000555477 MKRN4PQ13434 485 aaPredicted RBP11.47□□□□□ -0.57
CKAP2P1-201ENST00000555477 FBLN2P98095 1184 aa11.43□□□□□ -0.58
CKAP2P1-201ENST00000555477 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
CKAP2P1-201ENST00000555477 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
CKAP2P1-201ENST00000555477 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
CKAP2P1-201ENST00000555477 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
CKAP2P1-201ENST00000555477 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
CKAP2P1-201ENST00000555477 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
CKAP2P1-201ENST00000555477 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
CKAP2P1-201ENST00000555477 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
CKAP2P1-201ENST00000555477 SSUH2Q9Y2M2 353 aa11.15□□□□□ -0.62
CKAP2P1-201ENST00000555477 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
CKAP2P1-201ENST00000555477 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
CKAP2P1-201ENST00000555477 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
CKAP2P1-201ENST00000555477 CHRDL2Q6WN34 429 aa11.03□□□□□ -0.64
CKAP2P1-201ENST00000555477 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
CKAP2P1-201ENST00000555477 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
CKAP2P1-201ENST00000555477 POTEHQ6S545 545 aa10.92□□□□□ -0.66
CKAP2P1-201ENST00000555477 FKBP8Q14318 412 aa10.9□□□□□ -0.66
CKAP2P1-201ENST00000555477 PROM2Q8N271 834 aa10.87□□□□□ -0.67
CKAP2P1-201ENST00000555477 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
CKAP2P1-201ENST00000555477 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
CKAP2P1-201ENST00000555477 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
CKAP2P1-201ENST00000555477 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
CKAP2P1-201ENST00000555477 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
CKAP2P1-201ENST00000555477 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
CKAP2P1-201ENST00000555477 CREBZFQ9NS37 354 aa10.65□□□□□ -0.71
CKAP2P1-201ENST00000555477 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
CKAP2P1-201ENST00000555477 HAX1O00165 279 aa10.56□□□□□ -0.72
CKAP2P1-201ENST00000555477 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
CKAP2P1-201ENST00000555477 EVX2Q03828 476 aa10.51□□□□□ -0.73
CKAP2P1-201ENST00000555477 MIER1Q8N108 512 aa10.51□□□□□ -0.73
CKAP2P1-201ENST00000555477 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
CKAP2P1-201ENST00000555477 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
CKAP2P1-201ENST00000555477 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.73
CKAP2P1-201ENST00000555477 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
CKAP2P1-201ENST00000555477 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
CKAP2P1-201ENST00000555477 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
CKAP2P1-201ENST00000555477 NPM1P06748 294 aaKnown RBP eCLIP10.41□□□□□ -0.74
CKAP2P1-201ENST00000555477 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.74
CKAP2P1-201ENST00000555477 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
CKAP2P1-201ENST00000555477 ZBTB47Q9UFB7 747 aaPredicted RBP10.32□□□□□ -0.76
CKAP2P1-201ENST00000555477 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
CKAP2P1-201ENST00000555477 NUBP1P53384 320 aa10.29□□□□□ -0.76
CKAP2P1-201ENST00000555477 IFNLR1Q8IU57 520 aaPredicted RBP10.29□□□□□ -0.76
CKAP2P1-201ENST00000555477 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
CKAP2P1-201ENST00000555477 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
CKAP2P1-201ENST00000555477 KLHL34Q8N239 644 aa10.28□□□□□ -0.76
CKAP2P1-201ENST00000555477 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
CKAP2P1-201ENST00000555477 GABBR2O75899 941 aa10.26□□□□□ -0.77
CKAP2P1-201ENST00000555477 PHF12Q96QT6 1004 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms