RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.9□□□□□ -0.184e-13■■■■□ 23.3
NUMB-216ENST00000555394 RBFOX2O43251 390 aaKnown RBP eCLIP11.87□□□□□ -0.511e-12■■■■□ 26.1
NUMB-216ENST00000555394 HNRNPKP61978 463 aaKnown RBP eCLIP13.44□□□□□ -0.261e-11■■■■■ 39.4
NUMB-216ENST00000555394 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.37■□□□□ 0.056e-11■■■■■ 70.8
NUMB-216ENST00000555394 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.139e-11■■□□□ 13.7
NUMB-216ENST00000555394 HNRNPLP14866 589 aaKnown RBP eCLIP14.49□□□□□ -0.091e-10■■■■□ 21.6
NUMB-216ENST00000555394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.3■□□□□ 0.21e-10■■■■□ 19.6
NUMB-216ENST00000555394 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.55■□□□□ 0.082e-10■□□□□ 11.2
NUMB-216ENST00000555394 ZRANB2O95218 330 aaKnown RBP eCLIP15.77■□□□□ 0.122e-10■■□□□ 12
NUMB-216ENST00000555394 AGGF1Q8N302 714 aaeCLIP15□□□□□ -0.011e-9■■■■■ 34.6
NUMB-216ENST00000555394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.32■■□□□ 13e-9■■■□□ 17.6
NUMB-216ENST00000555394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.14■□□□□ 0.175e-9■■□□□ 11.4
NUMB-216ENST00000555394 PRPF4O43172 522 aaKnown RBP eCLIP14.92□□□□□ -0.027e-9■■■□□ 14.9
NUMB-216ENST00000555394 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.93□□□□□ -0.342e-8■■■■■ 28.5
NUMB-216ENST00000555394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.95□□□□□ -0.023e-8■□□□□ 11
NUMB-216ENST00000555394 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.295e-8■■□□□ 13.7
NUMB-216ENST00000555394 EFTUD2Q15029 972 aaKnown RBP eCLIP15.02□□□□□ -0.019e-8■■■□□ 16.2
NUMB-216ENST00000555394 MATR3P43243 847 aaKnown RBP eCLIP15.69■□□□□ 0.11e-7■■■■□ 20.4
NUMB-216ENST00000555394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.02■□□□□ 0.631e-7■■□□□ 14.4
NUMB-216ENST00000555394 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.181e-7■■■■■ 28.8
NUMB-216ENST00000555394 PCBP1Q15365 356 aaKnown RBP eCLIP15.21■□□□□ 0.031e-7■■■□□ 15.6
NUMB-216ENST00000555394 QKIQ96PU8 341 aaKnown RBP eCLIP14.96□□□□□ -0.011e-7■■■■■ 37.6
NUMB-216ENST00000555394 PTBP1P26599 531 aaKnown RBP eCLIP12.97□□□□□ -0.331e-7■■□□□ 13.6
NUMB-216ENST00000555394 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.342e-7■■■■□ 20.5
NUMB-216ENST00000555394 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.53□□□□□ -0.243e-7■■□□□ 12.8
NUMB-216ENST00000555394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.853e-7■□□□□ 9.2
NUMB-216ENST00000555394 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.8□□□□□ -0.043e-7■■■□□ 19.2
NUMB-216ENST00000555394 U2AF2P26368 475 aaKnown RBP eCLIP16.77■□□□□ 0.274e-7■□□□□ 9.6
NUMB-216ENST00000555394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.22□□□□□ -0.615e-7■■■□□ 15
NUMB-216ENST00000555394 RBM15Q96T37 977 aaKnown RBP eCLIP15.14■□□□□ 0.018e-7■□□□□ 10.9
NUMB-216ENST00000555394 PCBP2Q15366 365 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■■■□ 23.4
NUMB-216ENST00000555394 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.091e-6■■■□□ 18.1
NUMB-216ENST00000555394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■□□□□ 10.1
NUMB-216ENST00000555394 DDX6P26196 483 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■■□□ 15.5
NUMB-216ENST00000555394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■■ 77.5
NUMB-216ENST00000555394 DDX3XO00571 662 aaKnown RBP eCLIP15.73■□□□□ 0.112e-6■■□□□ 11.6
NUMB-216ENST00000555394 PPIGQ13427 754 aaKnown RBP eCLIP14.33□□□□□ -0.112e-6■□□□□ 10.7
NUMB-216ENST00000555394 HNRNPUQ00839 825 aaKnown RBP eCLIP19.91■□□□□ 0.782e-6■■■■□ 20.6
NUMB-216ENST00000555394 SF3B1O75533 1304 aaKnown RBP eCLIP14.88□□□□□ -0.032e-6■■■■■ 137.9
NUMB-216ENST00000555394 NCBP2P52298 156 aaKnown RBP eCLIP13.69□□□□□ -0.223e-6■■□□□ 13.1
NUMB-216ENST00000555394 KHSRPQ92945 711 aaKnown RBP eCLIP15.18■□□□□ 0.024e-6■■■■□ 20.7
NUMB-216ENST00000555394 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.32□□□□□ -0.124e-6■■■■■ 48.1
NUMB-216ENST00000555394 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.34e-6■□□□□ 10.4
NUMB-216ENST00000555394 G3BP1Q13283 466 aaKnown RBP eCLIP17.66■□□□□ 0.424e-6■■■■□ 21.1
NUMB-216ENST00000555394 SF3B4Q15427 424 aaKnown RBP eCLIP12.76□□□□□ -0.375e-6■■■■■ 30.8
NUMB-216ENST00000555394 AARSP49588 968 aaKnown RBP eCLIP15.47■□□□□ 0.078e-6■□□□□ 10.3
Retrieved 46 of 46 RNA–protein pairs in 18.2 ms