RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
NUMB-216ENST00000555394 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.91
NUMB-216ENST00000555394 ZCCHC6Q5VYS8 1495 aaKnown RBP26.52■■□□□ 1.84
NUMB-216ENST00000555394 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
NUMB-216ENST00000555394 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
NUMB-216ENST00000555394 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
NUMB-216ENST00000555394 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
NUMB-216ENST00000555394 ABCC9O60706 1549 aa25.53■■□□□ 1.68
NUMB-216ENST00000555394 MYO15BQ96JP2 1530 aa25.36■■□□□ 1.65
NUMB-216ENST00000555394 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
NUMB-216ENST00000555394 NACADO15069 1562 aa25.15■■□□□ 1.62
NUMB-216ENST00000555394 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
NUMB-216ENST00000555394 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
NUMB-216ENST00000555394 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
NUMB-216ENST00000555394 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
NUMB-216ENST00000555394 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
NUMB-216ENST00000555394 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
NUMB-216ENST00000555394 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
NUMB-216ENST00000555394 WIZO95785 1651 aa24.24■■□□□ 1.47
NUMB-216ENST00000555394 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
NUMB-216ENST00000555394 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
NUMB-216ENST00000555394 SMARCA4P51532 1647 aa24.07■■□□□ 1.44
NUMB-216ENST00000555394 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
NUMB-216ENST00000555394 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.42
NUMB-216ENST00000555394 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
NUMB-216ENST00000555394 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
NUMB-216ENST00000555394 SMARCA2P51531 1590 aa23.73■■□□□ 1.39
NUMB-216ENST00000555394 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
NUMB-216ENST00000555394 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
NUMB-216ENST00000555394 EIF4G1Q04637 1599 aaKnown RBP23.67■■□□□ 1.38
NUMB-216ENST00000555394 ATAD2BQ9ULI0 1458 aa23.65■■□□□ 1.38
NUMB-216ENST00000555394 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
NUMB-216ENST00000555394 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
NUMB-216ENST00000555394 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
NUMB-216ENST00000555394 NCAPD3P42695 1498 aa23.31■■□□□ 1.32
NUMB-216ENST00000555394 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
NUMB-216ENST00000555394 WRNQ14191 1432 aaPredicted RBP eCLIP23.22■■□□□ 1.31
NUMB-216ENST00000555394 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
NUMB-216ENST00000555394 SOGA1O94964 1423 aa23.21■■□□□ 1.31
NUMB-216ENST00000555394 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
NUMB-216ENST00000555394 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
NUMB-216ENST00000555394 CSRNP3Q8WYN3 585 aa23.05■■□□□ 1.28
NUMB-216ENST00000555394 EEA1Q15075 1411 aa22.99■■□□□ 1.27
NUMB-216ENST00000555394 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
NUMB-216ENST00000555394 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
NUMB-216ENST00000555394 CFTRP13569 1480 aa22.95■■□□□ 1.26
NUMB-216ENST00000555394 UBTFP17480 764 aaKnown RBP22.88■■□□□ 1.25
NUMB-216ENST00000555394 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
NUMB-216ENST00000555394 HRCP23327 699 aa22.86■■□□□ 1.25
NUMB-216ENST00000555394 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
NUMB-216ENST00000555394 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
NUMB-216ENST00000555394 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
NUMB-216ENST00000555394 CEP162Q5TB80 1403 aa22.8■■□□□ 1.24
NUMB-216ENST00000555394 CUX1P39880 1505 aa22.79■■□□□ 1.24
NUMB-216ENST00000555394 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
NUMB-216ENST00000555394 BIVM-ERCC5R4GMW8 1640 aa22.78■■□□□ 1.24
NUMB-216ENST00000555394 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
NUMB-216ENST00000555394 KIF21BO75037 1637 aa22.66■■□□□ 1.22
NUMB-216ENST00000555394 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
NUMB-216ENST00000555394 DNAJC5BQ9UF47 199 aa22.62■■□□□ 1.21
NUMB-216ENST00000555394 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
NUMB-216ENST00000555394 NESP48681 1621 aa22.57■■□□□ 1.2
NUMB-216ENST00000555394 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
NUMB-216ENST00000555394 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
NUMB-216ENST00000555394 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
NUMB-216ENST00000555394 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
NUMB-216ENST00000555394 PRXQ9BXM0 1461 aa22.53■■□□□ 1.2
NUMB-216ENST00000555394 CLIP1P30622 1438 aa22.52■■□□□ 1.2
NUMB-216ENST00000555394 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
NUMB-216ENST00000555394 CUX2O14529 1486 aa22.46■■□□□ 1.19
NUMB-216ENST00000555394 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
NUMB-216ENST00000555394 IGF1RP08069 1367 aa22.41■■□□□ 1.18
NUMB-216ENST00000555394 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
NUMB-216ENST00000555394 TOPBP1Q92547 1522 aa22.35■■□□□ 1.17
NUMB-216ENST00000555394 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
NUMB-216ENST00000555394 DNMBPQ6XZF7 1577 aa22.34■■□□□ 1.17
NUMB-216ENST00000555394 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.17
NUMB-216ENST00000555394 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
NUMB-216ENST00000555394 CARMIL1Q5VZK9 1371 aa22.28■■□□□ 1.16
NUMB-216ENST00000555394 PDS5BQ9NTI5 1447 aa22.27■■□□□ 1.16
NUMB-216ENST00000555394 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
NUMB-216ENST00000555394 APLP2Q06481 763 aa22.22■■□□□ 1.15
NUMB-216ENST00000555394 ABCA10Q8WWZ4 1543 aa22.22■■□□□ 1.15
NUMB-216ENST00000555394 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
NUMB-216ENST00000555394 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
NUMB-216ENST00000555394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
NUMB-216ENST00000555394 ARHGAP35Q9NRY4 1499 aa22.14■■□□□ 1.13
NUMB-216ENST00000555394 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
NUMB-216ENST00000555394 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
NUMB-216ENST00000555394 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
NUMB-216ENST00000555394 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
NUMB-216ENST00000555394 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
NUMB-216ENST00000555394 WDR97A6NE52 1622 aa22■■□□□ 1.11
NUMB-216ENST00000555394 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
NUMB-216ENST00000555394 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
NUMB-216ENST00000555394 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
NUMB-216ENST00000555394 CUL7Q14999 1698 aa21.94■■□□□ 1.1
NUMB-216ENST00000555394 MRC2Q9UBG0 1479 aa21.94■■□□□ 1.1
NUMB-216ENST00000555394 TARBP1Q13395 1621 aaKnown RBP21.92■■□□□ 1.1
NUMB-216ENST00000555394 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.091e-6■■■□□ 18.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms