RNA–Protein interactions for RNA: ENST00000555224.1

PAPOLA-213, Transcript of poly(A) polymerase alpha, humanhuman

TSL 5

Gene PAPOLA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-213ENST00000555224 AEBP2Q6ZN18 517 aaPredicted RBP28.42■■■□□ 2.14
PAPOLA-213ENST00000555224 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
PAPOLA-213ENST00000555224 PHF23Q9BUL5 403 aaPredicted RBP24.12■■□□□ 1.45
PAPOLA-213ENST00000555224 SENP3Q9H4L4 574 aaPredicted RBP24.09■■□□□ 1.45
PAPOLA-213ENST00000555224 FOXD1Q16676 465 aa22.44■■□□□ 1.18
PAPOLA-213ENST00000555224 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
PAPOLA-213ENST00000555224 PPP6R1Q9UPN7 881 aa21.38■■□□□ 1.01
PAPOLA-213ENST00000555224 ADRA2BP18089 450 aa21.32■■□□□ 1
PAPOLA-213ENST00000555224 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
PAPOLA-213ENST00000555224 MSH5O43196 834 aa20.75■□□□□ 0.91
PAPOLA-213ENST00000555224 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
PAPOLA-213ENST00000555224 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
PAPOLA-213ENST00000555224 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
PAPOLA-213ENST00000555224 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
PAPOLA-213ENST00000555224 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
PAPOLA-213ENST00000555224 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
PAPOLA-213ENST00000555224 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
PAPOLA-213ENST00000555224 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
PAPOLA-213ENST00000555224 KCNA4P22459 653 aa18.68■□□□□ 0.58
PAPOLA-213ENST00000555224 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
PAPOLA-213ENST00000555224 NPM3O75607 178 aaKnown RBP18.59■□□□□ 0.57
PAPOLA-213ENST00000555224 DCAF8L1A6NGE4 600 aa18.33■□□□□ 0.52
PAPOLA-213ENST00000555224 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
PAPOLA-213ENST00000555224 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
PAPOLA-213ENST00000555224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.442e-7■□□□□ 9.9
PAPOLA-213ENST00000555224 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
PAPOLA-213ENST00000555224 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
PAPOLA-213ENST00000555224 C1QBPQ07021 282 aaKnown RBP17.53■□□□□ 0.4
PAPOLA-213ENST00000555224 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
PAPOLA-213ENST00000555224 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
PAPOLA-213ENST00000555224 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
PAPOLA-213ENST00000555224 ZBTB22O15209 634 aa17.22■□□□□ 0.35
PAPOLA-213ENST00000555224 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
PAPOLA-213ENST00000555224 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
PAPOLA-213ENST00000555224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
PAPOLA-213ENST00000555224 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
PAPOLA-213ENST00000555224 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
PAPOLA-213ENST00000555224 CAPN15O75808 1086 aa16.99■□□□□ 0.31
PAPOLA-213ENST00000555224 APLP2Q06481 763 aa16.96■□□□□ 0.31
PAPOLA-213ENST00000555224 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
PAPOLA-213ENST00000555224 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
PAPOLA-213ENST00000555224 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
PAPOLA-213ENST00000555224 DSG3P32926 999 aa16.83■□□□□ 0.28
PAPOLA-213ENST00000555224 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
PAPOLA-213ENST00000555224 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
PAPOLA-213ENST00000555224 ABCB7O75027 752 aa16.67■□□□□ 0.26
PAPOLA-213ENST00000555224 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
PAPOLA-213ENST00000555224 POLA2Q14181 598 aa16.52■□□□□ 0.24
PAPOLA-213ENST00000555224 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
PAPOLA-213ENST00000555224 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
PAPOLA-213ENST00000555224 FBLN2P98095 1184 aa16■□□□□ 0.15
PAPOLA-213ENST00000555224 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
PAPOLA-213ENST00000555224 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
PAPOLA-213ENST00000555224 SPDYE2BA6NHP3 402 aa15.76■□□□□ 0.11
PAPOLA-213ENST00000555224 SPDYE6P0CI01 402 aa15.76■□□□□ 0.11
PAPOLA-213ENST00000555224 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
PAPOLA-213ENST00000555224 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
PAPOLA-213ENST00000555224 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
PAPOLA-213ENST00000555224 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
PAPOLA-213ENST00000555224 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
PAPOLA-213ENST00000555224 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
PAPOLA-213ENST00000555224 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
PAPOLA-213ENST00000555224 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
PAPOLA-213ENST00000555224 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
PAPOLA-213ENST00000555224 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
PAPOLA-213ENST00000555224 POTEHQ6S545 545 aa15.34■□□□□ 0.05
PAPOLA-213ENST00000555224 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
PAPOLA-213ENST00000555224 FXR2P51116 673 aaKnown RBP eCLIP15.23■□□□□ 0.03
PAPOLA-213ENST00000555224 PROM2Q8N271 834 aa15.23■□□□□ 0.03
PAPOLA-213ENST00000555224 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
PAPOLA-213ENST00000555224 FKBP8Q14318 412 aa15.2■□□□□ 0.02
PAPOLA-213ENST00000555224 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
PAPOLA-213ENST00000555224 STAG3Q9UJ98 1225 aa15.08■□□□□ 0
PAPOLA-213ENST00000555224 PRKAR2AP13861 404 aaKnown RBP15.04■□□□□ -0
PAPOLA-213ENST00000555224 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
PAPOLA-213ENST00000555224 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
PAPOLA-213ENST00000555224 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
PAPOLA-213ENST00000555224 HAX1O00165 279 aa14.78□□□□□ -0.04
PAPOLA-213ENST00000555224 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
PAPOLA-213ENST00000555224 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
PAPOLA-213ENST00000555224 EVX2Q03828 476 aa14.72□□□□□ -0.05
PAPOLA-213ENST00000555224 FBXO3Q9UK99 471 aa14.7□□□□□ -0.06
PAPOLA-213ENST00000555224 MIER1Q8N108 512 aa14.68□□□□□ -0.06
PAPOLA-213ENST00000555224 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
PAPOLA-213ENST00000555224 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
PAPOLA-213ENST00000555224 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
PAPOLA-213ENST00000555224 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
PAPOLA-213ENST00000555224 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
PAPOLA-213ENST00000555224 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
PAPOLA-213ENST00000555224 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
PAPOLA-213ENST00000555224 ZRANB1Q9UGI0 708 aa14.45□□□□□ -0.1
PAPOLA-213ENST00000555224 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
PAPOLA-213ENST00000555224 ZNF579Q8NAF0 562 aaKnown RBP14.41□□□□□ -0.1
PAPOLA-213ENST00000555224 NUBP1P53384 320 aa14.4□□□□□ -0.1
PAPOLA-213ENST00000555224 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
PAPOLA-213ENST00000555224 GABBR2O75899 941 aa14.37□□□□□ -0.11
PAPOLA-213ENST00000555224 IFNLR1Q8IU57 520 aaPredicted RBP14.36□□□□□ -0.11
PAPOLA-213ENST00000555224 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
PAPOLA-213ENST00000555224 KLHL34Q8N239 644 aa14.33□□□□□ -0.12
PAPOLA-213ENST00000555224 PHF12Q96QT6 1004 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 300.2 ms