RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 AEBP2Q6ZN18 517 aaPredicted RBP26.01■■□□□ 1.75
KTN1-219ENST00000555164 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
KTN1-219ENST00000555164 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
KTN1-219ENST00000555164 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
KTN1-219ENST00000555164 FOXD1Q16676 465 aa20.66■□□□□ 0.9
KTN1-219ENST00000555164 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
KTN1-219ENST00000555164 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
KTN1-219ENST00000555164 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
KTN1-219ENST00000555164 MSH5O43196 834 aa19.36■□□□□ 0.69
KTN1-219ENST00000555164 ADRA2BP18089 450 aa19.34■□□□□ 0.69
KTN1-219ENST00000555164 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
KTN1-219ENST00000555164 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
KTN1-219ENST00000555164 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
KTN1-219ENST00000555164 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
KTN1-219ENST00000555164 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
KTN1-219ENST00000555164 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
KTN1-219ENST00000555164 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
KTN1-219ENST00000555164 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
KTN1-219ENST00000555164 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
KTN1-219ENST00000555164 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
KTN1-219ENST00000555164 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
KTN1-219ENST00000555164 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
KTN1-219ENST00000555164 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
KTN1-219ENST00000555164 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
KTN1-219ENST00000555164 KCNA4P22459 653 aa16.4■□□□□ 0.22
KTN1-219ENST00000555164 C1QBPQ07021 282 aaKnown RBP16.28■□□□□ 0.2
KTN1-219ENST00000555164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■□□□□ 9.7
KTN1-219ENST00000555164 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
KTN1-219ENST00000555164 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
KTN1-219ENST00000555164 CAPN15O75808 1086 aa15.61■□□□□ 0.09
KTN1-219ENST00000555164 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
KTN1-219ENST00000555164 APLP2Q06481 763 aa15.58■□□□□ 0.08
KTN1-219ENST00000555164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
KTN1-219ENST00000555164 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
KTN1-219ENST00000555164 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
KTN1-219ENST00000555164 DSG3P32926 999 aa15.48■□□□□ 0.07
KTN1-219ENST00000555164 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
KTN1-219ENST00000555164 ZNF219Q9P2Y4 722 aaPredicted RBP15.42■□□□□ 0.06
KTN1-219ENST00000555164 MYCNP04198 464 aaPredicted RBP15.41■□□□□ 0.06
KTN1-219ENST00000555164 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
KTN1-219ENST00000555164 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
KTN1-219ENST00000555164 ABCB7O75027 752 aa15.25■□□□□ 0.03
KTN1-219ENST00000555164 ZBTB22O15209 634 aa15.06■□□□□ 0
KTN1-219ENST00000555164 POLA2Q14181 598 aa14.99□□□□□ -0.01
KTN1-219ENST00000555164 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
KTN1-219ENST00000555164 ATXN8OSP0DMR3 200 aa14.84□□□□□ -0.03
KTN1-219ENST00000555164 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
KTN1-219ENST00000555164 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
KTN1-219ENST00000555164 POTEHQ6S545 545 aa14.62□□□□□ -0.07
KTN1-219ENST00000555164 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
KTN1-219ENST00000555164 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
KTN1-219ENST00000555164 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
KTN1-219ENST00000555164 FBLN2P98095 1184 aa14.46□□□□□ -0.09
KTN1-219ENST00000555164 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
KTN1-219ENST00000555164 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
KTN1-219ENST00000555164 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
KTN1-219ENST00000555164 SPDYE2BA6NHP3 402 aa14.31□□□□□ -0.12
KTN1-219ENST00000555164 SPDYE6P0CI01 402 aa14.31□□□□□ -0.12
KTN1-219ENST00000555164 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
KTN1-219ENST00000555164 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
KTN1-219ENST00000555164 PITPNM1O00562 1244 aa14.18□□□□□ -0.14
KTN1-219ENST00000555164 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
KTN1-219ENST00000555164 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
KTN1-219ENST00000555164 PIP4P2Q8N4L2 257 aa14.08□□□□□ -0.16
KTN1-219ENST00000555164 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
KTN1-219ENST00000555164 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.177e-9■■□□□ 11.5
KTN1-219ENST00000555164 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
KTN1-219ENST00000555164 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
KTN1-219ENST00000555164 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
KTN1-219ENST00000555164 HAX1O00165 279 aa13.79□□□□□ -0.2
KTN1-219ENST00000555164 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
KTN1-219ENST00000555164 PRR29P0C7W0 189 aa13.76□□□□□ -0.21
KTN1-219ENST00000555164 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
KTN1-219ENST00000555164 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
KTN1-219ENST00000555164 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
KTN1-219ENST00000555164 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
KTN1-219ENST00000555164 EVX2Q03828 476 aa13.56□□□□□ -0.24
KTN1-219ENST00000555164 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
KTN1-219ENST00000555164 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
KTN1-219ENST00000555164 PROM2Q8N271 834 aa13.42□□□□□ -0.26
KTN1-219ENST00000555164 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
KTN1-219ENST00000555164 GABBR2O75899 941 aa13.32□□□□□ -0.28
KTN1-219ENST00000555164 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
KTN1-219ENST00000555164 CLCN6P51797 869 aa13.23□□□□□ -0.29
KTN1-219ENST00000555164 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
KTN1-219ENST00000555164 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
KTN1-219ENST00000555164 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
KTN1-219ENST00000555164 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
KTN1-219ENST00000555164 FKBP8Q14318 412 aa13.17□□□□□ -0.3
KTN1-219ENST00000555164 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
KTN1-219ENST00000555164 MIER1Q8N108 512 aa13.06□□□□□ -0.32
KTN1-219ENST00000555164 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
KTN1-219ENST00000555164 DCBLD2Q96PD2 775 aa13.03□□□□□ -0.32
KTN1-219ENST00000555164 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
KTN1-219ENST00000555164 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
KTN1-219ENST00000555164 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
KTN1-219ENST00000555164 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
KTN1-219ENST00000555164 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
KTN1-219ENST00000555164 LHX8Q68G74 356 aa12.91□□□□□ -0.34
KTN1-219ENST00000555164 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms