RNA–Protein interactions for RNA: ENST00000554890.1

KTN1-218, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-218ENST00000554890 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
KTN1-218ENST00000554890 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
KTN1-218ENST00000554890 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
KTN1-218ENST00000554890 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
KTN1-218ENST00000554890 FOXD1Q16676 465 aa19.78■□□□□ 0.76
KTN1-218ENST00000554890 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
KTN1-218ENST00000554890 MSH5O43196 834 aa18.62■□□□□ 0.57
KTN1-218ENST00000554890 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
KTN1-218ENST00000554890 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
KTN1-218ENST00000554890 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
KTN1-218ENST00000554890 ADRA2BP18089 450 aa18.11■□□□□ 0.49
KTN1-218ENST00000554890 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
KTN1-218ENST00000554890 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
KTN1-218ENST00000554890 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
KTN1-218ENST00000554890 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
KTN1-218ENST00000554890 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
KTN1-218ENST00000554890 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
KTN1-218ENST00000554890 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
KTN1-218ENST00000554890 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
KTN1-218ENST00000554890 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
KTN1-218ENST00000554890 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
KTN1-218ENST00000554890 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
KTN1-218ENST00000554890 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
KTN1-218ENST00000554890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.022e-7■■■□□ 14.8
KTN1-218ENST00000554890 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
KTN1-218ENST00000554890 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
KTN1-218ENST00000554890 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
KTN1-218ENST00000554890 POTEHQ6S545 545 aa14.77□□□□□ -0.05
KTN1-218ENST00000554890 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
KTN1-218ENST00000554890 CAPN15O75808 1086 aa14.74□□□□□ -0.05
KTN1-218ENST00000554890 DSG3P32926 999 aa14.73□□□□□ -0.05
KTN1-218ENST00000554890 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
KTN1-218ENST00000554890 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
KTN1-218ENST00000554890 ABCB7O75027 752 aa14.39□□□□□ -0.11
KTN1-218ENST00000554890 KCNA4P22459 653 aa14.32□□□□□ -0.12
KTN1-218ENST00000554890 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
KTN1-218ENST00000554890 APLP2Q06481 763 aa14.26□□□□□ -0.13
KTN1-218ENST00000554890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
KTN1-218ENST00000554890 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
KTN1-218ENST00000554890 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
KTN1-218ENST00000554890 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
KTN1-218ENST00000554890 CHRDL2Q6WN34 429 aa13.93□□□□□ -0.18
KTN1-218ENST00000554890 POLA2Q14181 598 aa13.9□□□□□ -0.18
KTN1-218ENST00000554890 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
KTN1-218ENST00000554890 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
KTN1-218ENST00000554890 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
KTN1-218ENST00000554890 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
KTN1-218ENST00000554890 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
KTN1-218ENST00000554890 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
KTN1-218ENST00000554890 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
KTN1-218ENST00000554890 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
KTN1-218ENST00000554890 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
KTN1-218ENST00000554890 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
KTN1-218ENST00000554890 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
KTN1-218ENST00000554890 HAX1O00165 279 aa13.4□□□□□ -0.26
KTN1-218ENST00000554890 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■□□□ 14.3
KTN1-218ENST00000554890 EVX2Q03828 476 aa13.23□□□□□ -0.29
KTN1-218ENST00000554890 ZBTB22O15209 634 aa13.18□□□□□ -0.3
KTN1-218ENST00000554890 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
KTN1-218ENST00000554890 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
KTN1-218ENST00000554890 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
KTN1-218ENST00000554890 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
KTN1-218ENST00000554890 FBLN2P98095 1184 aa13.04□□□□□ -0.32
KTN1-218ENST00000554890 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
KTN1-218ENST00000554890 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
KTN1-218ENST00000554890 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
KTN1-218ENST00000554890 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
KTN1-218ENST00000554890 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
KTN1-218ENST00000554890 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
KTN1-218ENST00000554890 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
KTN1-218ENST00000554890 GABBR2O75899 941 aa12.87□□□□□ -0.35
KTN1-218ENST00000554890 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
KTN1-218ENST00000554890 LHX8Q68G74 356 aa12.78□□□□□ -0.36
KTN1-218ENST00000554890 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
KTN1-218ENST00000554890 PABPN1Q86U42 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
KTN1-218ENST00000554890 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
KTN1-218ENST00000554890 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
KTN1-218ENST00000554890 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
KTN1-218ENST00000554890 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
KTN1-218ENST00000554890 CLCN6P51797 869 aa12.41□□□□□ -0.42
KTN1-218ENST00000554890 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
KTN1-218ENST00000554890 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
KTN1-218ENST00000554890 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
KTN1-218ENST00000554890 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
KTN1-218ENST00000554890 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
KTN1-218ENST00000554890 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
KTN1-218ENST00000554890 OTUD5Q96G74 571 aa12.22□□□□□ -0.45
KTN1-218ENST00000554890 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
KTN1-218ENST00000554890 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
KTN1-218ENST00000554890 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
KTN1-218ENST00000554890 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
KTN1-218ENST00000554890 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
KTN1-218ENST00000554890 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
KTN1-218ENST00000554890 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
KTN1-218ENST00000554890 POTEMA6NI47 508 aa12.08□□□□□ -0.48
KTN1-218ENST00000554890 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
KTN1-218ENST00000554890 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
KTN1-218ENST00000554890 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
KTN1-218ENST00000554890 MS4A3Q96HJ5 214 aa11.99□□□□□ -0.49
KTN1-218ENST00000554890 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms