RNA–Protein interactions for RNA: ENST00000554458.1

AL355773.1-201, humanhuman

TSL 3 BASIC

Gene AL355773.1, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355773.1-201ENST00000554458 AEBP2Q6ZN18 517 aaPredicted RBP24.63■■□□□ 1.53
AL355773.1-201ENST00000554458 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
AL355773.1-201ENST00000554458 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
AL355773.1-201ENST00000554458 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
AL355773.1-201ENST00000554458 FOXD1Q16676 465 aa19.5■□□□□ 0.71
AL355773.1-201ENST00000554458 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
AL355773.1-201ENST00000554458 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
AL355773.1-201ENST00000554458 ADRA2BP18089 450 aa18.49■□□□□ 0.55
AL355773.1-201ENST00000554458 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
AL355773.1-201ENST00000554458 MSH5O43196 834 aa18.13■□□□□ 0.49
AL355773.1-201ENST00000554458 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
AL355773.1-201ENST00000554458 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
AL355773.1-201ENST00000554458 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
AL355773.1-201ENST00000554458 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
AL355773.1-201ENST00000554458 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
AL355773.1-201ENST00000554458 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
AL355773.1-201ENST00000554458 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
AL355773.1-201ENST00000554458 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
AL355773.1-201ENST00000554458 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
AL355773.1-201ENST00000554458 KCNA4P22459 653 aa16.09■□□□□ 0.17
AL355773.1-201ENST00000554458 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
AL355773.1-201ENST00000554458 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
AL355773.1-201ENST00000554458 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
AL355773.1-201ENST00000554458 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
AL355773.1-201ENST00000554458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.07
AL355773.1-201ENST00000554458 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
AL355773.1-201ENST00000554458 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
AL355773.1-201ENST00000554458 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
AL355773.1-201ENST00000554458 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
AL355773.1-201ENST00000554458 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
AL355773.1-201ENST00000554458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
AL355773.1-201ENST00000554458 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
AL355773.1-201ENST00000554458 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
AL355773.1-201ENST00000554458 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
AL355773.1-201ENST00000554458 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
AL355773.1-201ENST00000554458 APLP2Q06481 763 aa14.83□□□□□ -0.04
AL355773.1-201ENST00000554458 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
AL355773.1-201ENST00000554458 CAPN15O75808 1086 aa14.82□□□□□ -0.04
AL355773.1-201ENST00000554458 ZBTB22O15209 634 aa14.79□□□□□ -0.04
AL355773.1-201ENST00000554458 TRHP20396 242 aaPredicted RBP14.66□□□□□ -0.06
AL355773.1-201ENST00000554458 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
AL355773.1-201ENST00000554458 DSG3P32926 999 aa14.63□□□□□ -0.07
AL355773.1-201ENST00000554458 ABCB7O75027 752 aa14.48□□□□□ -0.09
AL355773.1-201ENST00000554458 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
AL355773.1-201ENST00000554458 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
AL355773.1-201ENST00000554458 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
AL355773.1-201ENST00000554458 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
AL355773.1-201ENST00000554458 POLA2Q14181 598 aa14.36□□□□□ -0.11
AL355773.1-201ENST00000554458 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
AL355773.1-201ENST00000554458 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
AL355773.1-201ENST00000554458 FBLN2P98095 1184 aa13.93□□□□□ -0.18
AL355773.1-201ENST00000554458 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
AL355773.1-201ENST00000554458 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
AL355773.1-201ENST00000554458 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
AL355773.1-201ENST00000554458 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
AL355773.1-201ENST00000554458 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
AL355773.1-201ENST00000554458 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
AL355773.1-201ENST00000554458 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
AL355773.1-201ENST00000554458 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
AL355773.1-201ENST00000554458 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
AL355773.1-201ENST00000554458 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
AL355773.1-201ENST00000554458 POTEHQ6S545 545 aa13.43□□□□□ -0.26
AL355773.1-201ENST00000554458 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
AL355773.1-201ENST00000554458 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
AL355773.1-201ENST00000554458 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
AL355773.1-201ENST00000554458 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
AL355773.1-201ENST00000554458 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
AL355773.1-201ENST00000554458 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
AL355773.1-201ENST00000554458 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
AL355773.1-201ENST00000554458 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
AL355773.1-201ENST00000554458 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
AL355773.1-201ENST00000554458 PROM2Q8N271 834 aa13.11□□□□□ -0.31
AL355773.1-201ENST00000554458 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
AL355773.1-201ENST00000554458 FKBP8Q14318 412 aa13.09□□□□□ -0.31
AL355773.1-201ENST00000554458 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
AL355773.1-201ENST00000554458 HAX1O00165 279 aa12.93□□□□□ -0.34
AL355773.1-201ENST00000554458 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
AL355773.1-201ENST00000554458 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
AL355773.1-201ENST00000554458 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
AL355773.1-201ENST00000554458 EVX2Q03828 476 aa12.78□□□□□ -0.36
AL355773.1-201ENST00000554458 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
AL355773.1-201ENST00000554458 MIER1Q8N108 512 aa12.76□□□□□ -0.37
AL355773.1-201ENST00000554458 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
AL355773.1-201ENST00000554458 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
AL355773.1-201ENST00000554458 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
AL355773.1-201ENST00000554458 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
AL355773.1-201ENST00000554458 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
AL355773.1-201ENST00000554458 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
AL355773.1-201ENST00000554458 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
AL355773.1-201ENST00000554458 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
AL355773.1-201ENST00000554458 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
AL355773.1-201ENST00000554458 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
AL355773.1-201ENST00000554458 GABBR2O75899 941 aa12.53□□□□□ -0.4
AL355773.1-201ENST00000554458 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
AL355773.1-201ENST00000554458 CLCN6P51797 869 aa12.5□□□□□ -0.41
AL355773.1-201ENST00000554458 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
AL355773.1-201ENST00000554458 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
AL355773.1-201ENST00000554458 NUBP1P53384 320 aa12.44□□□□□ -0.42
AL355773.1-201ENST00000554458 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
AL355773.1-201ENST00000554458 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms