RNA–Protein interactions for RNA: ENST00000554328.5

AL049875.1-201, humanhuman

TSL 4 BASIC

Gene AL049875.1, Length 582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049875.1-201ENST00000554328 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
AL049875.1-201ENST00000554328 CHIC1Q5VXU3 224 aa25.09■■□□□ 1.61
AL049875.1-201ENST00000554328 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
AL049875.1-201ENST00000554328 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
AL049875.1-201ENST00000554328 FOXD1Q16676 465 aa20.8■□□□□ 0.92
AL049875.1-201ENST00000554328 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
AL049875.1-201ENST00000554328 MSH5O43196 834 aa19.57■□□□□ 0.72
AL049875.1-201ENST00000554328 PIAS4Q8N2W9 510 aaPredicted RBP19.56■□□□□ 0.72
AL049875.1-201ENST00000554328 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
AL049875.1-201ENST00000554328 ADRA2BP18089 450 aa19.48■□□□□ 0.71
AL049875.1-201ENST00000554328 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
AL049875.1-201ENST00000554328 SCAF1Q9H7N4 1312 aaKnown RBP18.04■□□□□ 0.48
AL049875.1-201ENST00000554328 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
AL049875.1-201ENST00000554328 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
AL049875.1-201ENST00000554328 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
AL049875.1-201ENST00000554328 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
AL049875.1-201ENST00000554328 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
AL049875.1-201ENST00000554328 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
AL049875.1-201ENST00000554328 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
AL049875.1-201ENST00000554328 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
AL049875.1-201ENST00000554328 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
AL049875.1-201ENST00000554328 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
AL049875.1-201ENST00000554328 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
AL049875.1-201ENST00000554328 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
AL049875.1-201ENST00000554328 KCNA4P22459 653 aa16.53■□□□□ 0.24
AL049875.1-201ENST00000554328 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
AL049875.1-201ENST00000554328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
AL049875.1-201ENST00000554328 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
AL049875.1-201ENST00000554328 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
AL049875.1-201ENST00000554328 APLP2Q06481 763 aa15.83■□□□□ 0.12
AL049875.1-201ENST00000554328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
AL049875.1-201ENST00000554328 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
AL049875.1-201ENST00000554328 CAPN15O75808 1086 aa15.78■□□□□ 0.12
AL049875.1-201ENST00000554328 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
AL049875.1-201ENST00000554328 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
AL049875.1-201ENST00000554328 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
AL049875.1-201ENST00000554328 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
AL049875.1-201ENST00000554328 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
AL049875.1-201ENST00000554328 DSG3P32926 999 aa15.59■□□□□ 0.09
AL049875.1-201ENST00000554328 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
AL049875.1-201ENST00000554328 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
AL049875.1-201ENST00000554328 ABCB7O75027 752 aa15.36■□□□□ 0.05
AL049875.1-201ENST00000554328 ZBTB22O15209 634 aa15.14■□□□□ 0.01
AL049875.1-201ENST00000554328 POLA2Q14181 598 aa15.14■□□□□ 0.01
AL049875.1-201ENST00000554328 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
AL049875.1-201ENST00000554328 ATXN8OSP0DMR3 200 aa15.03■□□□□ -0
AL049875.1-201ENST00000554328 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
AL049875.1-201ENST00000554328 ZBTB12Q9Y330 459 aaPredicted RBP15.01□□□□□ -0.01
AL049875.1-201ENST00000554328 POTEHQ6S545 545 aa14.73□□□□□ -0.05
AL049875.1-201ENST00000554328 FBLN2P98095 1184 aa14.66□□□□□ -0.06
AL049875.1-201ENST00000554328 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
AL049875.1-201ENST00000554328 AKT1S1Q96B36 256 aa14.65□□□□□ -0.06
AL049875.1-201ENST00000554328 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
AL049875.1-201ENST00000554328 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
AL049875.1-201ENST00000554328 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
AL049875.1-201ENST00000554328 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
AL049875.1-201ENST00000554328 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
AL049875.1-201ENST00000554328 SPDYE2Q495Y8 402 aa14.48□□□□□ -0.09
AL049875.1-201ENST00000554328 REM2Q8IYK8 340 aaPredicted RBP14.45□□□□□ -0.1
AL049875.1-201ENST00000554328 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
AL049875.1-201ENST00000554328 PITPNM1O00562 1244 aa14.29□□□□□ -0.12
AL049875.1-201ENST00000554328 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
AL049875.1-201ENST00000554328 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
AL049875.1-201ENST00000554328 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
AL049875.1-201ENST00000554328 PIP4P2Q8N4L2 257 aa14.19□□□□□ -0.14
AL049875.1-201ENST00000554328 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
AL049875.1-201ENST00000554328 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
AL049875.1-201ENST00000554328 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
AL049875.1-201ENST00000554328 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
AL049875.1-201ENST00000554328 HAX1O00165 279 aa13.94□□□□□ -0.18
AL049875.1-201ENST00000554328 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
AL049875.1-201ENST00000554328 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
AL049875.1-201ENST00000554328 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
AL049875.1-201ENST00000554328 STAG3Q9UJ98 1225 aa13.82□□□□□ -0.2
AL049875.1-201ENST00000554328 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
AL049875.1-201ENST00000554328 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
AL049875.1-201ENST00000554328 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
AL049875.1-201ENST00000554328 EVX2Q03828 476 aa13.61□□□□□ -0.23
AL049875.1-201ENST00000554328 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
AL049875.1-201ENST00000554328 PROM2Q8N271 834 aa13.53□□□□□ -0.24
AL049875.1-201ENST00000554328 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
AL049875.1-201ENST00000554328 CLCN6P51797 869 aa13.45□□□□□ -0.26
AL049875.1-201ENST00000554328 GABBR2O75899 941 aa13.43□□□□□ -0.26
AL049875.1-201ENST00000554328 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
AL049875.1-201ENST00000554328 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
AL049875.1-201ENST00000554328 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
AL049875.1-201ENST00000554328 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
AL049875.1-201ENST00000554328 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
AL049875.1-201ENST00000554328 FKBP8Q14318 412 aa13.32□□□□□ -0.28
AL049875.1-201ENST00000554328 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
AL049875.1-201ENST00000554328 MIER1Q8N108 512 aa13.24□□□□□ -0.29
AL049875.1-201ENST00000554328 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
AL049875.1-201ENST00000554328 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
AL049875.1-201ENST00000554328 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
AL049875.1-201ENST00000554328 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
AL049875.1-201ENST00000554328 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
AL049875.1-201ENST00000554328 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
AL049875.1-201ENST00000554328 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
AL049875.1-201ENST00000554328 POTEIP0CG38 1075 aa13.07□□□□□ -0.32
AL049875.1-201ENST00000554328 LHX8Q68G74 356 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms