RNA–Protein interactions for RNA: ENST00000554259.5

RALGAPA1-206, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 3,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-206	ENST00000554259	AEBP2	Q6ZN18	517 aa	Predicted RBP	8.55	□□□□□ -1.04
RALGAPA1-206	ENST00000554259	CHIC1	Q5VXU3	224 aa		8.5	□□□□□ -1.05
RALGAPA1-206	ENST00000554259	SENP3	Q9H4L4	574 aa	Predicted RBP	7.93	□□□□□ -1.14
RALGAPA1-206	ENST00000554259	POTED	Q86YR6	584 aa		7.8	□□□□□ -1.16
RALGAPA1-206	ENST00000554259	MSH5	O43196	834 aa		7.43	□□□□□ -1.22
RALGAPA1-206	ENST00000554259	PHF23	Q9BUL5	403 aa	Predicted RBP	7.3	□□□□□ -1.24
RALGAPA1-206	ENST00000554259	FOXD1	Q16676	465 aa		7.04	□□□□□ -1.28
RALGAPA1-206	ENST00000554259	DNAJC5B	Q9UF47	199 aa		6.79	□□□□□ -1.32
RALGAPA1-206	ENST00000554259	PLPPR3	Q6T4P5	718 aa		6.46	□□□□□ -1.38
RALGAPA1-206	ENST00000554259	DMRT2	Q9Y5R5	561 aa		6.27	□□□□□ -1.41
RALGAPA1-206	ENST00000554259	PIAS4	Q8N2W9	510 aa	Predicted RBP	6.2	□□□□□ -1.42
RALGAPA1-206	ENST00000554259	PPP6R1	Q9UPN7	881 aa		6.18	□□□□□ -1.42
RALGAPA1-206	ENST00000554259	C1QBP	Q07021	282 aa	Known RBP	6.15	□□□□□ -1.42
RALGAPA1-206	ENST00000554259	ADRA2B	P18089	450 aa		6.13	□□□□□ -1.43
RALGAPA1-206	ENST00000554259	RNF39	Q9H2S5	420 aa		6.07	□□□□□ -1.44
RALGAPA1-206	ENST00000554259	CACNB1	Q02641	598 aa	Predicted RBP	6.04	□□□□□ -1.44
RALGAPA1-206	ENST00000554259	SCAF1	Q9H7N4	1312 aa	Known RBP	5.98	□□□□□ -1.45
RALGAPA1-206	ENST00000554259	HOXD11	P31277	338 aa	Predicted RBP	5.93	□□□□□ -1.46
RALGAPA1-206	ENST00000554259	POTEH	Q6S545	545 aa		5.93	□□□□□ -1.46
RALGAPA1-206	ENST00000554259	RNF216	Q9NWF9	866 aa	Predicted RBP	5.65	□□□□□ -1.51
RALGAPA1-206	ENST00000554259	PPP4R3CP	Q6ZMV5	832 aa		5.64	□□□□□ -1.51
RALGAPA1-206	ENST00000554259	MAPK8IP2	Q13387	824 aa	Predicted RBP	5.59	□□□□□ -1.51
RALGAPA1-206	ENST00000554259	CNKSR2	Q8WXI2	1034 aa		5.57	□□□□□ -1.52
RALGAPA1-206	ENST00000554259	PCDH10	Q9P2E7	1040 aa		5.57	□□□□□ -1.52
RALGAPA1-206	ENST00000554259	CLCN6	P51797	869 aa		5.55	□□□□□ -1.52
RALGAPA1-206	ENST00000554259	APLP2	Q06481	763 aa		5.5	□□□□□ -1.53
RALGAPA1-206	ENST00000554259	NCBP3	Q53F19	620 aa	Known RBP	5.48	□□□□□ -1.53
RALGAPA1-206	ENST00000554259	SP7	Q8TDD2	431 aa	Predicted RBP	5.41	□□□□□ -1.54
RALGAPA1-206	ENST00000554259	NPM3	O75607	178 aa	Known RBP	5.38	□□□□□ -1.55
RALGAPA1-206	ENST00000554259	RBM42	Q9BTD8	480 aa	Known RBP	5.36	□□□□□ -1.55
RALGAPA1-206	ENST00000554259	KCNA4	P22459	653 aa		5.29	□□□□□ -1.56
RALGAPA1-206	ENST00000554259	DSG3	P32926	999 aa		5.29	□□□□□ -1.56
RALGAPA1-206	ENST00000554259	NISCH	Q9Y2I1	1504 aa		5.25	□□□□□ -1.57
RALGAPA1-206	ENST00000554259	DCAF8L1	A6NGE4	600 aa		5.16	□□□□□ -1.58
RALGAPA1-206	ENST00000554259	AKT1S1	Q96B36	256 aa		5.14	□□□□□ -1.59
RALGAPA1-206	ENST00000554259	SLC4A2	P04920	1241 aa		5.13	□□□□□ -1.59
RALGAPA1-206	ENST00000554259	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	5.11	□□□□□ -1.59
RALGAPA1-206	ENST00000554259	FXR2	P51116	673 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
RALGAPA1-206	ENST00000554259	HNRNPUL2	Q1KMD3	747 aa	Known RBP	5.11	□□□□□ -1.59
RALGAPA1-206	ENST00000554259	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	5.11	□□□□□ -1.59	2e-10	■□□□□ 8.3
RALGAPA1-206	ENST00000554259		U3KPZ7	1027 aa	Predicted RBP	5.1	□□□□□ -1.59
RALGAPA1-206	ENST00000554259	ZNF219	Q9P2Y4	722 aa	Predicted RBP	5.07	□□□□□ -1.6
RALGAPA1-206	ENST00000554259	CHRDL2	Q6WN34	429 aa		5.04	□□□□□ -1.6
RALGAPA1-206	ENST00000554259	SLC4A1AP	Q9BWU0	796 aa	Known RBP	5.02	□□□□□ -1.61
RALGAPA1-206	ENST00000554259	ZBTB12	Q9Y330	459 aa	Predicted RBP	5.02	□□□□□ -1.61
RALGAPA1-206	ENST00000554259	MYCN	P04198	464 aa	Predicted RBP	5.01	□□□□□ -1.61
RALGAPA1-206	ENST00000554259	SAMD1	Q6SPF0	538 aa	Predicted RBP	5	□□□□□ -1.61
RALGAPA1-206	ENST00000554259	FOXD4L1	Q9NU39	408 aa		4.98	□□□□□ -1.61
RALGAPA1-206	ENST00000554259	C19orf67	A6NJJ6	358 aa		4.97	□□□□□ -1.61
RALGAPA1-206	ENST00000554259	ATXN8OS	P0DMR3	200 aa		4.95	□□□□□ -1.62
RALGAPA1-206	ENST00000554259	LHX8	Q68G74	356 aa		4.94	□□□□□ -1.62
RALGAPA1-206	ENST00000554259	SPINK5	Q9NQ38	1064 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-206	ENST00000554259	ZBTB22	O15209	634 aa		4.91	□□□□□ -1.62
RALGAPA1-206	ENST00000554259	PLSCR2	Q9NRY7	297 aa		4.87	□□□□□ -1.63
RALGAPA1-206	ENST00000554259	CAPN15	O75808	1086 aa		4.86	□□□□□ -1.63
RALGAPA1-206	ENST00000554259	ABCC9	O60706	1549 aa		4.86	□□□□□ -1.63
RALGAPA1-206	ENST00000554259	PIP4P2	Q8N4L2	257 aa		4.85	□□□□□ -1.63
RALGAPA1-206	ENST00000554259	ATF5	Q9Y2D1	282 aa	Predicted RBP	4.81	□□□□□ -1.64
RALGAPA1-206	ENST00000554259	TRH	P20396	242 aa	Predicted RBP	4.78	□□□□□ -1.65
RALGAPA1-206	ENST00000554259	CSRNP3	Q8WYN3	585 aa		4.77	□□□□□ -1.65
RALGAPA1-206	ENST00000554259	POLA2	Q14181	598 aa		4.73	□□□□□ -1.65
RALGAPA1-206	ENST00000554259	MAMSTR	Q6ZN01	415 aa		4.73	□□□□□ -1.65
RALGAPA1-206	ENST00000554259	ABCB7	O75027	752 aa		4.72	□□□□□ -1.65
RALGAPA1-206	ENST00000554259	REM2	Q8IYK8	340 aa	Predicted RBP	4.7	□□□□□ -1.66
RALGAPA1-206	ENST00000554259	DCAF8L2	P0C7V8	631 aa		4.69	□□□□□ -1.66
RALGAPA1-206	ENST00000554259	CCDC180	Q9P1Z9	1646 aa		4.65	□□□□□ -1.66
RALGAPA1-206	ENST00000554259	GABBR2	O75899	941 aa		4.65	□□□□□ -1.66
RALGAPA1-206	ENST00000554259	MKRN4P	Q13434	485 aa	Predicted RBP	4.64	□□□□□ -1.67
RALGAPA1-206	ENST00000554259	FBLN2	P98095	1184 aa		4.63	□□□□□ -1.67
RALGAPA1-206	ENST00000554259	SPDYE2B	A6NHP3	402 aa		4.62	□□□□□ -1.67
RALGAPA1-206	ENST00000554259	SPDYE6	P0CI01	402 aa		4.62	□□□□□ -1.67
RALGAPA1-206	ENST00000554259	SPDYE2	Q495Y8	402 aa		4.62	□□□□□ -1.67
RALGAPA1-206	ENST00000554259	SSUH2	Q9Y2M2	353 aa		4.61	□□□□□ -1.67
RALGAPA1-206	ENST00000554259	ZNF579	Q8NAF0	562 aa	Known RBP	4.61	□□□□□ -1.67
RALGAPA1-206	ENST00000554259	PABPN1	Q86U42	306 aa	Known RBP eCLIP	4.59	□□□□□ -1.68
RALGAPA1-206	ENST00000554259	OSCAR	Q8IYS5	282 aa		4.57	□□□□□ -1.68
RALGAPA1-206	ENST00000554259	EHMT2	Q96KQ7	1210 aa		4.56	□□□□□ -1.68
RALGAPA1-206	ENST00000554259	RGS20	O76081	388 aa		4.56	□□□□□ -1.68
RALGAPA1-206	ENST00000554259	RB1CC1	Q8TDY2	1594 aa		4.54	□□□□□ -1.68
RALGAPA1-206	ENST00000554259	PITPNM1	O00562	1244 aa		4.53	□□□□□ -1.68
RALGAPA1-206	ENST00000554259	PROM2	Q8N271	834 aa		4.53	□□□□□ -1.68
RALGAPA1-206	ENST00000554259	HAX1	O00165	279 aa		4.5	□□□□□ -1.69
RALGAPA1-206	ENST00000554259	SPDYE1	Q8NFV5	336 aa	Predicted RBP	4.5	□□□□□ -1.69
RALGAPA1-206	ENST00000554259	POTEI	P0CG38	1075 aa		4.49	□□□□□ -1.69
RALGAPA1-206	ENST00000554259	NACAD	O15069	1562 aa		4.49	□□□□□ -1.69
RALGAPA1-206	ENST00000554259	ZNF692	Q9BU19	519 aa	Predicted RBP	4.48	□□□□□ -1.69
RALGAPA1-206	ENST00000554259	POTEM	A6NI47	508 aa		4.47	□□□□□ -1.69
RALGAPA1-206	ENST00000554259	OTUD5	Q96G74	571 aa		4.45	□□□□□ -1.7
RALGAPA1-206	ENST00000554259	C7	P10643	843 aa		4.42	□□□□□ -1.7
RALGAPA1-206	ENST00000554259	SLC39A7	Q92504	469 aa		4.42	□□□□□ -1.7
RALGAPA1-206	ENST00000554259	STAG3	Q9UJ98	1225 aa		4.42	□□□□□ -1.7
RALGAPA1-206	ENST00000554259	SPDYE4	A6NLX3	237 aa		4.42	□□□□□ -1.7
RALGAPA1-206	ENST00000554259	PTGER2	P43116	358 aa		4.42	□□□□□ -1.7
RALGAPA1-206	ENST00000554259	POTEG	Q6S5H5	508 aa		4.42	□□□□□ -1.7
RALGAPA1-206	ENST00000554259	ASTL	Q6HA08	431 aa	Predicted RBP	4.4	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	4.39	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	EVX2	Q03828	476 aa		4.38	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	CECR2	Q9BXF3	1484 aa		4.38	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	MYO15B	Q96JP2	1530 aa		4.37	□□□□□ -1.71
RALGAPA1-206	ENST00000554259	BICRA	Q9NZM4	1560 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms