RNA–Protein interactions for RNA: ENST00000554048.2

DUXA-201, Transcript of double homeobox A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene DUXA, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUXA-201ENST00000554048 AEBP2Q6ZN18 517 aaPredicted RBP31.67■■■□□ 2.66
DUXA-201ENST00000554048 CHIC1Q5VXU3 224 aa31.08■■■□□ 2.57
DUXA-201ENST00000554048 PHF23Q9BUL5 403 aaPredicted RBP27.47■■□□□ 1.99
DUXA-201ENST00000554048 SENP3Q9H4L4 574 aaPredicted RBP26.65■■□□□ 1.86
DUXA-201ENST00000554048 PLPPR3Q6T4P5 718 aa25.31■■□□□ 1.64
DUXA-201ENST00000554048 FOXD1Q16676 465 aa24.81■■□□□ 1.56
DUXA-201ENST00000554048 PPP6R1Q9UPN7 881 aa24.17■■□□□ 1.46
DUXA-201ENST00000554048 ADRA2BP18089 450 aa24.15■■□□□ 1.46
DUXA-201ENST00000554048 PIAS4Q8N2W9 510 aaPredicted RBP23.44■■□□□ 1.34
DUXA-201ENST00000554048 MSH5O43196 834 aa22.63■■□□□ 1.21
DUXA-201ENST00000554048 PPP4R3CPQ6ZMV5 832 aa22.4■■□□□ 1.18
DUXA-201ENST00000554048 KCNA4P22459 653 aa22.28■■□□□ 1.16
DUXA-201ENST00000554048 SCAF1Q9H7N4 1312 aaKnown RBP21.87■■□□□ 1.09
DUXA-201ENST00000554048 MAPK8IP2Q13387 824 aaPredicted RBP21.86■■□□□ 1.09
DUXA-201ENST00000554048 NCBP3Q53F19 620 aaKnown RBP21.77■■□□□ 1.08
DUXA-201ENST00000554048 CNKSR2Q8WXI2 1034 aa21.65■■□□□ 1.06
DUXA-201ENST00000554048 NPM3O75607 178 aaKnown RBP21.61■■□□□ 1.05
DUXA-201ENST00000554048 DMRT2Q9Y5R5 561 aa21.35■■□□□ 1.01
DUXA-201ENST00000554048 SLC4A1APQ9BWU0 796 aaKnown RBP21.19■□□□□ 0.98
DUXA-201ENST00000554048 RNF216Q9NWF9 866 aaPredicted RBP21.15■□□□□ 0.98
DUXA-201ENST00000554048 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
DUXA-201ENST00000554048 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
DUXA-201ENST00000554048 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
DUXA-201ENST00000554048 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
DUXA-201ENST00000554048 ZBTB22O15209 634 aa20.56■□□□□ 0.88
DUXA-201ENST00000554048 DCAF8L1A6NGE4 600 aa20.47■□□□□ 0.87
DUXA-201ENST00000554048 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
DUXA-201ENST00000554048 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
DUXA-201ENST00000554048 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
DUXA-201ENST00000554048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.03■□□□□ 0.8
DUXA-201ENST00000554048 MYCNP04198 464 aaPredicted RBP19.87■□□□□ 0.77
DUXA-201ENST00000554048 U3KPZ7 1027 aaPredicted RBP19.81■□□□□ 0.76
DUXA-201ENST00000554048 ATXN8OSP0DMR3 200 aa19.51■□□□□ 0.71
DUXA-201ENST00000554048 RNF39Q9H2S5 420 aa19.5■□□□□ 0.71
DUXA-201ENST00000554048 ATF5Q9Y2D1 282 aaPredicted RBP19.5■□□□□ 0.71
DUXA-201ENST00000554048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
DUXA-201ENST00000554048 HNRNPUL2Q1KMD3 747 aaKnown RBP19.46■□□□□ 0.71
DUXA-201ENST00000554048 SAMD1Q6SPF0 538 aaPredicted RBP19.46■□□□□ 0.71
DUXA-201ENST00000554048 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
DUXA-201ENST00000554048 C1QBPQ07021 282 aaKnown RBP19.2■□□□□ 0.66
DUXA-201ENST00000554048 APLP2Q06481 763 aa19.14■□□□□ 0.65
DUXA-201ENST00000554048 CAPN15O75808 1086 aa19.05■□□□□ 0.64
DUXA-201ENST00000554048 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
DUXA-201ENST00000554048 ZNF219Q9P2Y4 722 aaPredicted RBP19.04■□□□□ 0.64
DUXA-201ENST00000554048 POLA2Q14181 598 aa18.8■□□□□ 0.6
DUXA-201ENST00000554048 ABCB7O75027 752 aa18.78■□□□□ 0.6
DUXA-201ENST00000554048 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
DUXA-201ENST00000554048 DSG3P32926 999 aa18.68■□□□□ 0.58
DUXA-201ENST00000554048 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
DUXA-201ENST00000554048 FKBP8Q14318 412 aa18.6■□□□□ 0.57
DUXA-201ENST00000554048 FBLN2P98095 1184 aa18.45■□□□□ 0.54
DUXA-201ENST00000554048 ZBTB12Q9Y330 459 aaPredicted RBP18.34■□□□□ 0.53
DUXA-201ENST00000554048 SPDYE4A6NLX3 237 aa18.26■□□□□ 0.51
DUXA-201ENST00000554048 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
DUXA-201ENST00000554048 PROM2Q8N271 834 aa17.99■□□□□ 0.47
DUXA-201ENST00000554048 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
DUXA-201ENST00000554048 SPDYE2BA6NHP3 402 aa17.94■□□□□ 0.46
DUXA-201ENST00000554048 SPDYE6P0CI01 402 aa17.94■□□□□ 0.46
DUXA-201ENST00000554048 SPDYE2Q495Y8 402 aa17.94■□□□□ 0.46
DUXA-201ENST00000554048 SSUH2Q9Y2M2 353 aa17.89■□□□□ 0.45
DUXA-201ENST00000554048 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
DUXA-201ENST00000554048 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
DUXA-201ENST00000554048 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
DUXA-201ENST00000554048 VASPP50552 380 aaPredicted RBP17.56■□□□□ 0.4
DUXA-201ENST00000554048 AKT1S1Q96B36 256 aa17.54■□□□□ 0.4
DUXA-201ENST00000554048 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
DUXA-201ENST00000554048 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
DUXA-201ENST00000554048 IFNLR1Q8IU57 520 aaPredicted RBP17.42■□□□□ 0.38
DUXA-201ENST00000554048 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
DUXA-201ENST00000554048 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
DUXA-201ENST00000554048 SPDYE1Q8NFV5 336 aaPredicted RBP17.34■□□□□ 0.37
DUXA-201ENST00000554048 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
DUXA-201ENST00000554048 MIER1Q8N108 512 aa17.28■□□□□ 0.36
DUXA-201ENST00000554048 PITPNM1O00562 1244 aa17.27■□□□□ 0.36
DUXA-201ENST00000554048 PLCD3Q8N3E9 789 aa17.27■□□□□ 0.36
DUXA-201ENST00000554048 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
DUXA-201ENST00000554048 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
DUXA-201ENST00000554048 CREBZFQ9NS37 354 aa17.08■□□□□ 0.32
DUXA-201ENST00000554048 SPOCK2Q92563 424 aa17.06■□□□□ 0.32
DUXA-201ENST00000554048 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
DUXA-201ENST00000554048 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.31
DUXA-201ENST00000554048 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
DUXA-201ENST00000554048 PKD2Q13563 968 aa16.94■□□□□ 0.3
DUXA-201ENST00000554048 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
DUXA-201ENST00000554048 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
DUXA-201ENST00000554048 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
DUXA-201ENST00000554048 NUBP1P53384 320 aa16.84■□□□□ 0.29
DUXA-201ENST00000554048 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
DUXA-201ENST00000554048 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
DUXA-201ENST00000554048 PIP4P2Q8N4L2 257 aa16.78■□□□□ 0.28
DUXA-201ENST00000554048 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
DUXA-201ENST00000554048 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
DUXA-201ENST00000554048 ECM2O94769 699 aaPredicted RBP16.72■□□□□ 0.27
DUXA-201ENST00000554048 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
DUXA-201ENST00000554048 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
DUXA-201ENST00000554048 RGL2O15211 777 aa16.62■□□□□ 0.25
DUXA-201ENST00000554048 GSE1Q14687 1217 aa16.62■□□□□ 0.25
DUXA-201ENST00000554048 FAM212AQ96EL1 285 aa16.62■□□□□ 0.25
DUXA-201ENST00000554048 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
DUXA-201ENST00000554048 TSPYL2Q9H2G4 693 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms