RNA–Protein interactions for RNA: ENST00000553788.5

ETFRF1-202, Transcript of electron transfer flavoprotein regulatory factor 1, humanhuman

TSL 3 BASIC

Gene ETFRF1, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFRF1-202ENST00000553788 AEBP2Q6ZN18 517 aaPredicted RBP34.21■■■■□ 3.07
ETFRF1-202ENST00000553788 CHIC1Q5VXU3 224 aa33.24■■■□□ 2.91
ETFRF1-202ENST00000553788 PHF23Q9BUL5 403 aaPredicted RBP29.25■■■□□ 2.27
ETFRF1-202ENST00000553788 SENP3Q9H4L4 574 aaPredicted RBP28.98■■■□□ 2.23
ETFRF1-202ENST00000553788 FOXD1Q16676 465 aa26.98■■□□□ 1.91
ETFRF1-202ENST00000553788 PLPPR3Q6T4P5 718 aa26.91■■□□□ 1.9
ETFRF1-202ENST00000553788 PPP6R1Q9UPN7 881 aa25.89■■□□□ 1.74
ETFRF1-202ENST00000553788 ADRA2BP18089 450 aa25.84■■□□□ 1.73
ETFRF1-202ENST00000553788 PIAS4Q8N2W9 510 aaPredicted RBP25.36■■□□□ 1.65
ETFRF1-202ENST00000553788 MSH5O43196 834 aa24.87■■□□□ 1.57
ETFRF1-202ENST00000553788 PPP4R3CPQ6ZMV5 832 aa23.73■■□□□ 1.39
ETFRF1-202ENST00000553788 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
ETFRF1-202ENST00000553788 MAPK8IP2Q13387 824 aaPredicted RBP23.51■■□□□ 1.35
ETFRF1-202ENST00000553788 DMRT2Q9Y5R5 561 aa23.13■■□□□ 1.29
ETFRF1-202ENST00000553788 CNKSR2Q8WXI2 1034 aa23.07■■□□□ 1.28
ETFRF1-202ENST00000553788 NCBP3Q53F19 620 aaKnown RBP23.03■■□□□ 1.28
ETFRF1-202ENST00000553788 KCNA4P22459 653 aa23.02■■□□□ 1.28
ETFRF1-202ENST00000553788 POTEDQ86YR6 584 aa22.94■■□□□ 1.26
ETFRF1-202ENST00000553788 NPM3O75607 178 aaKnown RBP22.72■■□□□ 1.23
ETFRF1-202ENST00000553788 RNF216Q9NWF9 866 aaPredicted RBP22.65■■□□□ 1.22
ETFRF1-202ENST00000553788 HOXD11P31277 338 aaPredicted RBP22.61■■□□□ 1.21
ETFRF1-202ENST00000553788 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
ETFRF1-202ENST00000553788 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
ETFRF1-202ENST00000553788 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
ETFRF1-202ENST00000553788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.54■■□□□ 1.04
ETFRF1-202ENST00000553788 SLC4A2P04920 1241 aa21.51■■□□□ 1.03
ETFRF1-202ENST00000553788 RNF39Q9H2S5 420 aa21.33■■□□□ 1.01
ETFRF1-202ENST00000553788 ZBTB22O15209 634 aa21.19■□□□□ 0.98
ETFRF1-202ENST00000553788 FOXD4L1Q9NU39 408 aa21.19■□□□□ 0.98
ETFRF1-202ENST00000553788 U3KPZ7 1027 aaPredicted RBP21.18■□□□□ 0.98
ETFRF1-202ENST00000553788 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
ETFRF1-202ENST00000553788 C1QBPQ07021 282 aaKnown RBP21.05■□□□□ 0.96
ETFRF1-202ENST00000553788 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
ETFRF1-202ENST00000553788 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
ETFRF1-202ENST00000553788 CACNB1Q02641 598 aaPredicted RBP20.88■□□□□ 0.93
ETFRF1-202ENST00000553788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
ETFRF1-202ENST00000553788 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
ETFRF1-202ENST00000553788 SAMD1Q6SPF0 538 aaPredicted RBP20.75■□□□□ 0.91
ETFRF1-202ENST00000553788 SPINK5Q9NQ38 1064 aaPredicted RBP20.66■□□□□ 0.9
ETFRF1-202ENST00000553788 APLP2Q06481 763 aa20.61■□□□□ 0.89
ETFRF1-202ENST00000553788 CAPN15O75808 1086 aa20.55■□□□□ 0.88
ETFRF1-202ENST00000553788 ATF5Q9Y2D1 282 aaPredicted RBP20.49■□□□□ 0.87
ETFRF1-202ENST00000553788 ATXN8OSP0DMR3 200 aa20.47■□□□□ 0.87
ETFRF1-202ENST00000553788 TRHP20396 242 aaPredicted RBP20.43■□□□□ 0.86
ETFRF1-202ENST00000553788 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
ETFRF1-202ENST00000553788 DSG3P32926 999 aa20.25■□□□□ 0.83
ETFRF1-202ENST00000553788 ABCB7O75027 752 aa20.16■□□□□ 0.82
ETFRF1-202ENST00000553788 POLA2Q14181 598 aa20.08■□□□□ 0.81
ETFRF1-202ENST00000553788 ZBTB12Q9Y330 459 aaPredicted RBP19.66■□□□□ 0.74
ETFRF1-202ENST00000553788 FBLN2P98095 1184 aa19.57■□□□□ 0.72
ETFRF1-202ENST00000553788 MKRN4PQ13434 485 aaPredicted RBP19.57■□□□□ 0.72
ETFRF1-202ENST00000553788 OSCARQ8IYS5 282 aa19.37■□□□□ 0.69
ETFRF1-202ENST00000553788 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
ETFRF1-202ENST00000553788 SPDYE2BA6NHP3 402 aa19.16■□□□□ 0.66
ETFRF1-202ENST00000553788 SPDYE6P0CI01 402 aa19.16■□□□□ 0.66
ETFRF1-202ENST00000553788 SPDYE2Q495Y8 402 aa19.16■□□□□ 0.66
ETFRF1-202ENST00000553788 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
ETFRF1-202ENST00000553788 SPDYE4A6NLX3 237 aa19.03■□□□□ 0.64
ETFRF1-202ENST00000553788 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
ETFRF1-202ENST00000553788 SSUH2Q9Y2M2 353 aa19■□□□□ 0.63
ETFRF1-202ENST00000553788 FKBP8Q14318 412 aa18.93■□□□□ 0.62
ETFRF1-202ENST00000553788 REM2Q8IYK8 340 aaPredicted RBP18.86■□□□□ 0.61
ETFRF1-202ENST00000553788 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
ETFRF1-202ENST00000553788 PROM2Q8N271 834 aa18.7■□□□□ 0.58
ETFRF1-202ENST00000553788 PITPNM1O00562 1244 aa18.63■□□□□ 0.57
ETFRF1-202ENST00000553788 SPDYE1Q8NFV5 336 aaPredicted RBP18.63■□□□□ 0.57
ETFRF1-202ENST00000553788 CLEC11AQ9Y240 323 aa18.57■□□□□ 0.56
ETFRF1-202ENST00000553788 CHRDL2Q6WN34 429 aa18.54■□□□□ 0.56
ETFRF1-202ENST00000553788 STAG3Q9UJ98 1225 aa18.46■□□□□ 0.55
ETFRF1-202ENST00000553788 PRR29P0C7W0 189 aa18.38■□□□□ 0.53
ETFRF1-202ENST00000553788 FXR2P51116 673 aaKnown RBP eCLIP18.32■□□□□ 0.52
ETFRF1-202ENST00000553788 PIP4P2Q8N4L2 257 aa18.29■□□□□ 0.52
ETFRF1-202ENST00000553788 FBXO3Q9UK99 471 aa18.26■□□□□ 0.51
ETFRF1-202ENST00000553788 PRKAR2AP13861 404 aaKnown RBP18.16■□□□□ 0.5
ETFRF1-202ENST00000553788 CHADLQ6NUI6 762 aa18.16■□□□□ 0.5
ETFRF1-202ENST00000553788 CREBZFQ9NS37 354 aa18.13■□□□□ 0.49
ETFRF1-202ENST00000553788 POTEHQ6S545 545 aa18.12■□□□□ 0.49
ETFRF1-202ENST00000553788 MIER1Q8N108 512 aa18.08■□□□□ 0.48
ETFRF1-202ENST00000553788 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
ETFRF1-202ENST00000553788 PLCD3Q8N3E9 789 aa18.01■□□□□ 0.47
ETFRF1-202ENST00000553788 FARP1Q9Y4F1 1045 aaPredicted RBP17.96■□□□□ 0.47
ETFRF1-202ENST00000553788 MNX1P50219 401 aaPredicted RBP17.94■□□□□ 0.46
ETFRF1-202ENST00000553788 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
ETFRF1-202ENST00000553788 IFNLR1Q8IU57 520 aaPredicted RBP17.81■□□□□ 0.44
ETFRF1-202ENST00000553788 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
ETFRF1-202ENST00000553788 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
ETFRF1-202ENST00000553788 KLHL34Q8N239 644 aa17.77■□□□□ 0.44
ETFRF1-202ENST00000553788 HAX1O00165 279 aa17.75■□□□□ 0.43
ETFRF1-202ENST00000553788 C19orf67A6NJJ6 358 aa17.7■□□□□ 0.42
ETFRF1-202ENST00000553788 NUBP1P53384 320 aa17.64■□□□□ 0.41
ETFRF1-202ENST00000553788 EVX2Q03828 476 aa17.64■□□□□ 0.41
ETFRF1-202ENST00000553788 CD44P16070 742 aaKnown RBP17.62■□□□□ 0.41
ETFRF1-202ENST00000553788 SPOCK2Q92563 424 aa17.6■□□□□ 0.41
ETFRF1-202ENST00000553788 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
ETFRF1-202ENST00000553788 TSPYL2Q9H2G4 693 aaPredicted RBP17.53■□□□□ 0.4
ETFRF1-202ENST00000553788 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
ETFRF1-202ENST00000553788 PAK3O75914 559 aaPredicted RBP17.51■□□□□ 0.39
ETFRF1-202ENST00000553788 DCAF8Q5TAQ9 597 aa17.46■□□□□ 0.39
ETFRF1-202ENST00000553788 FAM212AQ96EL1 285 aa17.44■□□□□ 0.38
ETFRF1-202ENST00000553788 CCDC61Q9Y6R9 512 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms