RNA–Protein interactions for RNA: ENST00000553628.1

AC009396.1-201, humanhuman

TSL 2 BASIC

Gene AC009396.1, Length 1,079 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009396.1-201ENST00000553628 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
AC009396.1-201ENST00000553628 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
AC009396.1-201ENST00000553628 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
AC009396.1-201ENST00000553628 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
AC009396.1-201ENST00000553628 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
AC009396.1-201ENST00000553628 FOXD1Q16676 465 aa22.23■■□□□ 1.15
AC009396.1-201ENST00000553628 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
AC009396.1-201ENST00000553628 ADRA2BP18089 450 aa21.44■■□□□ 1.02
AC009396.1-201ENST00000553628 PIAS4Q8N2W9 510 aaPredicted RBP20.95■□□□□ 0.94
AC009396.1-201ENST00000553628 MSH5O43196 834 aa20.41■□□□□ 0.86
AC009396.1-201ENST00000553628 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
AC009396.1-201ENST00000553628 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
AC009396.1-201ENST00000553628 KCNA4P22459 653 aa19.49■□□□□ 0.71
AC009396.1-201ENST00000553628 MAPK8IP2Q13387 824 aaPredicted RBP19.44■□□□□ 0.7
AC009396.1-201ENST00000553628 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
AC009396.1-201ENST00000553628 CNKSR2Q8WXI2 1034 aa19.23■□□□□ 0.67
AC009396.1-201ENST00000553628 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
AC009396.1-201ENST00000553628 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
AC009396.1-201ENST00000553628 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
AC009396.1-201ENST00000553628 HOXD11P31277 338 aaPredicted RBP18.77■□□□□ 0.6
AC009396.1-201ENST00000553628 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
AC009396.1-201ENST00000553628 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
AC009396.1-201ENST00000553628 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
AC009396.1-201ENST00000553628 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
AC009396.1-201ENST00000553628 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
AC009396.1-201ENST00000553628 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
AC009396.1-201ENST00000553628 ZBTB22O15209 634 aa17.99■□□□□ 0.47
AC009396.1-201ENST00000553628 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
AC009396.1-201ENST00000553628 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
AC009396.1-201ENST00000553628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
AC009396.1-201ENST00000553628 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
AC009396.1-201ENST00000553628 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
AC009396.1-201ENST00000553628 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
AC009396.1-201ENST00000553628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
AC009396.1-201ENST00000553628 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
AC009396.1-201ENST00000553628 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
AC009396.1-201ENST00000553628 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
AC009396.1-201ENST00000553628 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
AC009396.1-201ENST00000553628 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
AC009396.1-201ENST00000553628 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
AC009396.1-201ENST00000553628 APLP2Q06481 763 aa17.1■□□□□ 0.33
AC009396.1-201ENST00000553628 CAPN15O75808 1086 aa16.98■□□□□ 0.31
AC009396.1-201ENST00000553628 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
AC009396.1-201ENST00000553628 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
AC009396.1-201ENST00000553628 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
AC009396.1-201ENST00000553628 DSG3P32926 999 aa16.72■□□□□ 0.27
AC009396.1-201ENST00000553628 ABCB7O75027 752 aa16.71■□□□□ 0.27
AC009396.1-201ENST00000553628 POLA2Q14181 598 aa16.67■□□□□ 0.26
AC009396.1-201ENST00000553628 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
AC009396.1-201ENST00000553628 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
AC009396.1-201ENST00000553628 FBLN2P98095 1184 aa16.33■□□□□ 0.2
AC009396.1-201ENST00000553628 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
AC009396.1-201ENST00000553628 FKBP8Q14318 412 aa16.14■□□□□ 0.17
AC009396.1-201ENST00000553628 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
AC009396.1-201ENST00000553628 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
AC009396.1-201ENST00000553628 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
AC009396.1-201ENST00000553628 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
AC009396.1-201ENST00000553628 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
AC009396.1-201ENST00000553628 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
AC009396.1-201ENST00000553628 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
AC009396.1-201ENST00000553628 PROM2Q8N271 834 aa15.84■□□□□ 0.13
AC009396.1-201ENST00000553628 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
AC009396.1-201ENST00000553628 AKT1S1Q96B36 256 aa15.71■□□□□ 0.11
AC009396.1-201ENST00000553628 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
AC009396.1-201ENST00000553628 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
AC009396.1-201ENST00000553628 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
AC009396.1-201ENST00000553628 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
AC009396.1-201ENST00000553628 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
AC009396.1-201ENST00000553628 CLEC11AQ9Y240 323 aa15.39■□□□□ 0.05
AC009396.1-201ENST00000553628 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
AC009396.1-201ENST00000553628 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
AC009396.1-201ENST00000553628 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
AC009396.1-201ENST00000553628 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
AC009396.1-201ENST00000553628 MIER1Q8N108 512 aa15.16■□□□□ 0.02
AC009396.1-201ENST00000553628 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
AC009396.1-201ENST00000553628 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
AC009396.1-201ENST00000553628 FXR2P51116 673 aaKnown RBP eCLIP15.11■□□□□ 0.01
AC009396.1-201ENST00000553628 CHADLQ6NUI6 762 aa15.06■□□□□ 0
AC009396.1-201ENST00000553628 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
AC009396.1-201ENST00000553628 PLEKHG5O94827 1062 aa15.02■□□□□ -0
AC009396.1-201ENST00000553628 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
AC009396.1-201ENST00000553628 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
AC009396.1-201ENST00000553628 KLHL34Q8N239 644 aa15□□□□□ -0.01
AC009396.1-201ENST00000553628 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
AC009396.1-201ENST00000553628 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
AC009396.1-201ENST00000553628 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
AC009396.1-201ENST00000553628 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
AC009396.1-201ENST00000553628 NUBP1P53384 320 aa14.84□□□□□ -0.03
AC009396.1-201ENST00000553628 AMER1Q5JTC6 1135 aaPredicted RBP14.82□□□□□ -0.04
AC009396.1-201ENST00000553628 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
AC009396.1-201ENST00000553628 RASEFQ8IZ41 740 aa14.76□□□□□ -0.05
AC009396.1-201ENST00000553628 PKD2Q13563 968 aa14.69□□□□□ -0.06
AC009396.1-201ENST00000553628 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
AC009396.1-201ENST00000553628 POTEHQ6S545 545 aa14.65□□□□□ -0.06
AC009396.1-201ENST00000553628 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
AC009396.1-201ENST00000553628 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
AC009396.1-201ENST00000553628 GSE1Q14687 1217 aa14.62□□□□□ -0.07
AC009396.1-201ENST00000553628 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
AC009396.1-201ENST00000553628 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
AC009396.1-201ENST00000553628 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms