RNA–Protein interactions for RNA: ENST00000553628.1

AC009396.1-201, humanhuman

TSL 2 BASIC

Gene AC009396.1, Length 1,079 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009396.1-201ENST00000553628 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
AC009396.1-201ENST00000553628 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
AC009396.1-201ENST00000553628 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
AC009396.1-201ENST00000553628 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
AC009396.1-201ENST00000553628 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
AC009396.1-201ENST00000553628 FOXD1Q16676 465 aa22.23■■□□□ 1.15
AC009396.1-201ENST00000553628 PPP6R1Q9UPN7 881 aa21.49■■□□□ 1.03
AC009396.1-201ENST00000553628 ADRA2BP18089 450 aa21.44■■□□□ 1.02
AC009396.1-201ENST00000553628 PIAS4Q8N2W9 510 aaPredicted RBP20.95■□□□□ 0.94
AC009396.1-201ENST00000553628 MSH5O43196 834 aa20.41■□□□□ 0.86
AC009396.1-201ENST00000553628 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
AC009396.1-201ENST00000553628 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
AC009396.1-201ENST00000553628 KCNA4P22459 653 aa19.49■□□□□ 0.71
AC009396.1-201ENST00000553628 MAPK8IP2Q13387 824 aaPredicted RBP19.44■□□□□ 0.7
AC009396.1-201ENST00000553628 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
AC009396.1-201ENST00000553628 CNKSR2Q8WXI2 1034 aa19.23■□□□□ 0.67
AC009396.1-201ENST00000553628 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
AC009396.1-201ENST00000553628 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
AC009396.1-201ENST00000553628 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
AC009396.1-201ENST00000553628 HOXD11P31277 338 aaPredicted RBP18.77■□□□□ 0.6
AC009396.1-201ENST00000553628 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
AC009396.1-201ENST00000553628 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
AC009396.1-201ENST00000553628 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
AC009396.1-201ENST00000553628 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
AC009396.1-201ENST00000553628 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
AC009396.1-201ENST00000553628 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
AC009396.1-201ENST00000553628 ZBTB22O15209 634 aa17.99■□□□□ 0.47
AC009396.1-201ENST00000553628 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
AC009396.1-201ENST00000553628 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
AC009396.1-201ENST00000553628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
AC009396.1-201ENST00000553628 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
AC009396.1-201ENST00000553628 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
AC009396.1-201ENST00000553628 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
AC009396.1-201ENST00000553628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
AC009396.1-201ENST00000553628 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
AC009396.1-201ENST00000553628 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
AC009396.1-201ENST00000553628 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
AC009396.1-201ENST00000553628 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
AC009396.1-201ENST00000553628 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
AC009396.1-201ENST00000553628 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
AC009396.1-201ENST00000553628 APLP2Q06481 763 aa17.1■□□□□ 0.33
AC009396.1-201ENST00000553628 CAPN15O75808 1086 aa16.98■□□□□ 0.31
AC009396.1-201ENST00000553628 CACNB1Q02641 598 aaPredicted RBP16.98■□□□□ 0.31
AC009396.1-201ENST00000553628 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
AC009396.1-201ENST00000553628 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
AC009396.1-201ENST00000553628 DSG3P32926 999 aa16.72■□□□□ 0.27
AC009396.1-201ENST00000553628 ABCB7O75027 752 aa16.71■□□□□ 0.27
AC009396.1-201ENST00000553628 POLA2Q14181 598 aa16.67■□□□□ 0.26
AC009396.1-201ENST00000553628 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
AC009396.1-201ENST00000553628 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
AC009396.1-201ENST00000553628 FBLN2P98095 1184 aa16.33■□□□□ 0.2
AC009396.1-201ENST00000553628 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
AC009396.1-201ENST00000553628 FKBP8Q14318 412 aa16.14■□□□□ 0.17
AC009396.1-201ENST00000553628 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
AC009396.1-201ENST00000553628 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
AC009396.1-201ENST00000553628 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
AC009396.1-201ENST00000553628 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
AC009396.1-201ENST00000553628 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
AC009396.1-201ENST00000553628 SSUH2Q9Y2M2 353 aa15.9■□□□□ 0.14
AC009396.1-201ENST00000553628 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
AC009396.1-201ENST00000553628 PROM2Q8N271 834 aa15.84■□□□□ 0.13
AC009396.1-201ENST00000553628 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.11
AC009396.1-201ENST00000553628 AKT1S1Q96B36 256 aa15.71■□□□□ 0.11
AC009396.1-201ENST00000553628 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
AC009396.1-201ENST00000553628 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
AC009396.1-201ENST00000553628 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
AC009396.1-201ENST00000553628 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
AC009396.1-201ENST00000553628 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
AC009396.1-201ENST00000553628 CLEC11AQ9Y240 323 aa15.39■□□□□ 0.05
AC009396.1-201ENST00000553628 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
AC009396.1-201ENST00000553628 PRR29P0C7W0 189 aa15.25■□□□□ 0.03
AC009396.1-201ENST00000553628 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
AC009396.1-201ENST00000553628 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
AC009396.1-201ENST00000553628 MIER1Q8N108 512 aa15.16■□□□□ 0.02
AC009396.1-201ENST00000553628 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
AC009396.1-201ENST00000553628 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
AC009396.1-201ENST00000553628 FXR2P51116 673 aaKnown RBP eCLIP15.11■□□□□ 0.01
AC009396.1-201ENST00000553628 CHADLQ6NUI6 762 aa15.06■□□□□ 0
AC009396.1-201ENST00000553628 PIP4P2Q8N4L2 257 aa15.06■□□□□ 0
AC009396.1-201ENST00000553628 PLEKHG5O94827 1062 aa15.02■□□□□ -0
AC009396.1-201ENST00000553628 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
AC009396.1-201ENST00000553628 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
AC009396.1-201ENST00000553628 KLHL34Q8N239 644 aa15□□□□□ -0.01
AC009396.1-201ENST00000553628 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
AC009396.1-201ENST00000553628 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
AC009396.1-201ENST00000553628 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
AC009396.1-201ENST00000553628 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
AC009396.1-201ENST00000553628 NUBP1P53384 320 aa14.84□□□□□ -0.03
AC009396.1-201ENST00000553628 AMER1Q5JTC6 1135 aaPredicted RBP14.82□□□□□ -0.04
AC009396.1-201ENST00000553628 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
AC009396.1-201ENST00000553628 RASEFQ8IZ41 740 aa14.76□□□□□ -0.05
AC009396.1-201ENST00000553628 PKD2Q13563 968 aa14.69□□□□□ -0.06
AC009396.1-201ENST00000553628 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
AC009396.1-201ENST00000553628 POTEHQ6S545 545 aa14.65□□□□□ -0.06
AC009396.1-201ENST00000553628 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
AC009396.1-201ENST00000553628 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
AC009396.1-201ENST00000553628 GSE1Q14687 1217 aa14.62□□□□□ -0.07
AC009396.1-201ENST00000553628 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
AC009396.1-201ENST00000553628 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
AC009396.1-201ENST00000553628 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms