RNA–Protein interactions for RNA: ENST00000553410.1

AC107958.3-201, humanhuman

TSL 3 BASIC

Gene AC107958.3, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC107958.3-201ENST00000553410 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
AC107958.3-201ENST00000553410 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
AC107958.3-201ENST00000553410 SENP3Q9H4L4 574 aaPredicted RBP14.2□□□□□ -0.14
AC107958.3-201ENST00000553410 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
AC107958.3-201ENST00000553410 FOXD1Q16676 465 aa13.18□□□□□ -0.3
AC107958.3-201ENST00000553410 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
AC107958.3-201ENST00000553410 MSH5O43196 834 aa12.57□□□□□ -0.4
AC107958.3-201ENST00000553410 PIAS4Q8N2W9 510 aaPredicted RBP12.32□□□□□ -0.44
AC107958.3-201ENST00000553410 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
AC107958.3-201ENST00000553410 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
AC107958.3-201ENST00000553410 ADRA2BP18089 450 aa12□□□□□ -0.49
AC107958.3-201ENST00000553410 DMRT2Q9Y5R5 561 aa11.17□□□□□ -0.62
AC107958.3-201ENST00000553410 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
AC107958.3-201ENST00000553410 MAPK8IP2Q13387 824 aaPredicted RBP11.09□□□□□ -0.63
AC107958.3-201ENST00000553410 CACNB1Q02641 598 aaPredicted RBP10.96□□□□□ -0.65
AC107958.3-201ENST00000553410 DCAF8L1A6NGE4 600 aa10.78□□□□□ -0.68
AC107958.3-201ENST00000553410 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
AC107958.3-201ENST00000553410 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
AC107958.3-201ENST00000553410 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
AC107958.3-201ENST00000553410 C1QBPQ07021 282 aaKnown RBP10.51□□□□□ -0.73
AC107958.3-201ENST00000553410 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
AC107958.3-201ENST00000553410 RNF216Q9NWF9 866 aaPredicted RBP10.49□□□□□ -0.73
AC107958.3-201ENST00000553410 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
AC107958.3-201ENST00000553410 NCBP3Q53F19 620 aaKnown RBP10.18□□□□□ -0.78
AC107958.3-201ENST00000553410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.78
AC107958.3-201ENST00000553410 POTEHQ6S545 545 aa9.94□□□□□ -0.82
AC107958.3-201ENST00000553410 NPM3O75607 178 aaKnown RBP9.93□□□□□ -0.82
AC107958.3-201ENST00000553410 CAPN15O75808 1086 aa9.87□□□□□ -0.83
AC107958.3-201ENST00000553410 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
AC107958.3-201ENST00000553410 DSG3P32926 999 aa9.84□□□□□ -0.83
AC107958.3-201ENST00000553410 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
AC107958.3-201ENST00000553410 APLP2Q06481 763 aa9.71□□□□□ -0.86
AC107958.3-201ENST00000553410 ZNF219Q9P2Y4 722 aaPredicted RBP9.64□□□□□ -0.87
AC107958.3-201ENST00000553410 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
AC107958.3-201ENST00000553410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.61□□□□□ -0.87
AC107958.3-201ENST00000553410 HNRNPUL2Q1KMD3 747 aaKnown RBP9.61□□□□□ -0.87
AC107958.3-201ENST00000553410 ABCB7O75027 752 aa9.57□□□□□ -0.88
AC107958.3-201ENST00000553410 SLC4A2P04920 1241 aa9.52□□□□□ -0.89
AC107958.3-201ENST00000553410 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
AC107958.3-201ENST00000553410 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
AC107958.3-201ENST00000553410 KCNA4P22459 653 aa9.44□□□□□ -0.9
AC107958.3-201ENST00000553410 CHRDL2Q6WN34 429 aa9.36□□□□□ -0.91
AC107958.3-201ENST00000553410 POLA2Q14181 598 aa9.28□□□□□ -0.92
AC107958.3-201ENST00000553410 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
AC107958.3-201ENST00000553410 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
AC107958.3-201ENST00000553410 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
AC107958.3-201ENST00000553410 ZBTB12Q9Y330 459 aaPredicted RBP9.16□□□□□ -0.94
AC107958.3-201ENST00000553410 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
AC107958.3-201ENST00000553410 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
AC107958.3-201ENST00000553410 HAX1O00165 279 aa9□□□□□ -0.97
AC107958.3-201ENST00000553410 OSCARQ8IYS5 282 aa9□□□□□ -0.97
AC107958.3-201ENST00000553410 FOXD4L1Q9NU39 408 aa8.98□□□□□ -0.97
AC107958.3-201ENST00000553410 PITPNM1O00562 1244 aa8.95□□□□□ -0.98
AC107958.3-201ENST00000553410 ATF5Q9Y2D1 282 aaPredicted RBP8.95□□□□□ -0.98
AC107958.3-201ENST00000553410 FXR2P51116 673 aaKnown RBP eCLIP8.93□□□□□ -0.98
AC107958.3-201ENST00000553410 SLC4A1APQ9BWU0 796 aaKnown RBP8.9□□□□□ -0.98
AC107958.3-201ENST00000553410 SPDYE2BA6NHP3 402 aa8.8□□□□□ -1
AC107958.3-201ENST00000553410 SPDYE6P0CI01 402 aa8.8□□□□□ -1
AC107958.3-201ENST00000553410 SPDYE2Q495Y8 402 aa8.8□□□□□ -1
AC107958.3-201ENST00000553410 FBLN2P98095 1184 aa8.78□□□□□ -1
AC107958.3-201ENST00000553410 ATXN8OSP0DMR3 200 aa8.74□□□□□ -1.01
AC107958.3-201ENST00000553410 PRKAR2AP13861 404 aaKnown RBP8.74□□□□□ -1.01
AC107958.3-201ENST00000553410 EVX2Q03828 476 aa8.74□□□□□ -1.01
AC107958.3-201ENST00000553410 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
AC107958.3-201ENST00000553410 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
AC107958.3-201ENST00000553410 C19orf67A6NJJ6 358 aa8.65□□□□□ -1.02
AC107958.3-201ENST00000553410 ZBTB22O15209 634 aa8.63□□□□□ -1.03
AC107958.3-201ENST00000553410 ZNF692Q9BU19 519 aaPredicted RBP8.63□□□□□ -1.03
AC107958.3-201ENST00000553410 GABBR2O75899 941 aa8.61□□□□□ -1.03
AC107958.3-201ENST00000553410 LHX8Q68G74 356 aa8.6□□□□□ -1.03
AC107958.3-201ENST00000553410 SSUH2Q9Y2M2 353 aa8.6□□□□□ -1.03
AC107958.3-201ENST00000553410 PRR29P0C7W0 189 aa8.54□□□□□ -1.04
AC107958.3-201ENST00000553410 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
AC107958.3-201ENST00000553410 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
AC107958.3-201ENST00000553410 CLCN6P51797 869 aa8.48□□□□□ -1.05
AC107958.3-201ENST00000553410 PABPN1Q86U42 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
AC107958.3-201ENST00000553410 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
AC107958.3-201ENST00000553410 FARP1Q9Y4F1 1045 aaPredicted RBP8.41□□□□□ -1.06
AC107958.3-201ENST00000553410 DCBLD2Q96PD2 775 aa8.38□□□□□ -1.07
AC107958.3-201ENST00000553410 POTEIP0CG38 1075 aa8.35□□□□□ -1.07
AC107958.3-201ENST00000553410 PLSCR2Q9NRY7 297 aa8.34□□□□□ -1.07
AC107958.3-201ENST00000553410 ZNF579Q8NAF0 562 aaKnown RBP8.29□□□□□ -1.08
AC107958.3-201ENST00000553410 ZRANB1Q9UGI0 708 aa8.28□□□□□ -1.08
AC107958.3-201ENST00000553410 PAK3O75914 559 aaPredicted RBP8.24□□□□□ -1.09
AC107958.3-201ENST00000553410 STAG3Q9UJ98 1225 aa8.24□□□□□ -1.09
AC107958.3-201ENST00000553410 GALR2O43603 387 aaPredicted RBP8.18□□□□□ -1.1
AC107958.3-201ENST00000553410 CREBZFQ9NS37 354 aa8.17□□□□□ -1.1
AC107958.3-201ENST00000553410 OTUD5Q96G74 571 aa8.15□□□□□ -1.1
AC107958.3-201ENST00000553410 POTEMA6NI47 508 aa8.12□□□□□ -1.11
AC107958.3-201ENST00000553410 NPM1P06748 294 aaKnown RBP eCLIP8.12□□□□□ -1.11
AC107958.3-201ENST00000553410 PHF12Q96QT6 1004 aa8.09□□□□□ -1.11
AC107958.3-201ENST00000553410 POTEGQ6S5H5 508 aa8.08□□□□□ -1.12
AC107958.3-201ENST00000553410 POTEB2H3BUK9 544 aa8.07□□□□□ -1.12
AC107958.3-201ENST00000553410 PCDH10Q9P2E7 1040 aa8.07□□□□□ -1.12
AC107958.3-201ENST00000553410 SPDYE4A6NLX3 237 aa8.05□□□□□ -1.12
AC107958.3-201ENST00000553410 MAMSTRQ6ZN01 415 aa8.04□□□□□ -1.12
AC107958.3-201ENST00000553410 SLC39A7Q92504 469 aa8.04□□□□□ -1.12
AC107958.3-201ENST00000553410 METRNQ9UJH8 293 aa8.04□□□□□ -1.12
AC107958.3-201ENST00000553410 C7P10643 843 aa8.03□□□□□ -1.12
AC107958.3-201ENST00000553410 ASTLQ6HA08 431 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms