RNA–Protein interactions for RNA: ENST00000553286.5

KLC1-212, Transcript of kinesin light chain 1, humanhuman

TSL 5 BASIC

Gene KLC1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-212ENST00000553286 NISCHQ9Y2I1 1504 aa32.91■■■□□ 2.86
KLC1-212ENST00000553286 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
KLC1-212ENST00000553286 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
KLC1-212ENST00000553286 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
KLC1-212ENST00000553286 PCGF6Q9BYE7 350 aa28.17■■■□□ 2.1
KLC1-212ENST00000553286 CHIC1Q5VXU3 224 aa28.1■■■□□ 2.09
KLC1-212ENST00000553286 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
KLC1-212ENST00000553286 PPARGC1BQ86YN6 1023 aaKnown RBP27.96■■■□□ 2.07
KLC1-212ENST00000553286 HRCP23327 699 aa27.87■■■□□ 2.05
KLC1-212ENST00000553286 LOC105371045A0A1W2PR82 267 aa27.84■■■□□ 2.05
KLC1-212ENST00000553286 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
KLC1-212ENST00000553286 EHMT2Q96KQ7 1210 aa27.67■■■□□ 2.02
KLC1-212ENST00000553286 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
KLC1-212ENST00000553286 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
KLC1-212ENST00000553286 TRIM26Q12899 539 aaPredicted RBP26.94■■□□□ 1.9
KLC1-212ENST00000553286 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
KLC1-212ENST00000553286 DCAF1Q9Y4B6 1507 aa26.77■■□□□ 1.88
KLC1-212ENST00000553286 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
KLC1-212ENST00000553286 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
KLC1-212ENST00000553286 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.82
KLC1-212ENST00000553286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.39■■□□□ 1.81
KLC1-212ENST00000553286 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
KLC1-212ENST00000553286 ABCC9O60706 1549 aa26.25■■□□□ 1.79
KLC1-212ENST00000553286 ZEB1P37275 1124 aaPredicted RBP26.23■■□□□ 1.79
KLC1-212ENST00000553286 CCER1Q8TC90 406 aaPredicted RBP26.2■■□□□ 1.79
KLC1-212ENST00000553286 SCAF1Q9H7N4 1312 aaKnown RBP26.19■■□□□ 1.78
KLC1-212ENST00000553286 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
KLC1-212ENST00000553286 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.74
KLC1-212ENST00000553286 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.74
KLC1-212ENST00000553286 NEUROD1Q13562 356 aa25.81■■□□□ 1.72
KLC1-212ENST00000553286 UBTFP17480 764 aaKnown RBP25.79■■□□□ 1.72
KLC1-212ENST00000553286 YTHDC1Q96MU7 727 aaKnown RBP25.79■■□□□ 1.72
KLC1-212ENST00000553286 WIZO95785 1651 aa25.77■■□□□ 1.72
KLC1-212ENST00000553286 DIEXFQ68CQ4 756 aaKnown RBP25.73■■□□□ 1.71
KLC1-212ENST00000553286 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
KLC1-212ENST00000553286 NACADO15069 1562 aa25.64■■□□□ 1.7
KLC1-212ENST00000553286 HNRNPUL2Q1KMD3 747 aaKnown RBP25.63■■□□□ 1.69
KLC1-212ENST00000553286 ACIN1Q9UKV3 1341 aaKnown RBP25.62■■□□□ 1.69
KLC1-212ENST00000553286 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
KLC1-212ENST00000553286 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
KLC1-212ENST00000553286 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
KLC1-212ENST00000553286 SOGA1O94964 1423 aa25.51■■□□□ 1.67
KLC1-212ENST00000553286 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
KLC1-212ENST00000553286 CENPBP07199 599 aaPredicted RBP25.41■■□□□ 1.66
KLC1-212ENST00000553286 CEP162Q5TB80 1403 aa25.41■■□□□ 1.66
KLC1-212ENST00000553286 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
KLC1-212ENST00000553286 CSRNP3Q8WYN3 585 aa25.37■■□□□ 1.65
KLC1-212ENST00000553286 ZNF316A6NFI3 1004 aaPredicted RBP25.24■■□□□ 1.63
KLC1-212ENST00000553286 MIER1Q8N108 512 aa25.22■■□□□ 1.63
KLC1-212ENST00000553286 BAZ1AQ9NRL2 1556 aaPredicted RBP25.19■■□□□ 1.62
KLC1-212ENST00000553286 APLP2Q06481 763 aa25.16■■□□□ 1.62
KLC1-212ENST00000553286 TNIKQ9UKE5 1360 aa25.08■■□□□ 1.61
KLC1-212ENST00000553286 ITGAEP38570 1179 aa25.04■■□□□ 1.6
KLC1-212ENST00000553286 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
KLC1-212ENST00000553286 SMARCA2P51531 1590 aa25■■□□□ 1.59
KLC1-212ENST00000553286 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
KLC1-212ENST00000553286 UNC13AQ9UPW8 1703 aa24.99■■□□□ 1.59
KLC1-212ENST00000553286 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
KLC1-212ENST00000553286 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
KLC1-212ENST00000553286 GOLGA3Q08378 1498 aa24.89■■□□□ 1.58
KLC1-212ENST00000553286 CLIP1P30622 1438 aa24.88■■□□□ 1.57
KLC1-212ENST00000553286 RAPGEF2Q9Y4G8 1499 aa24.73■■□□□ 1.55
KLC1-212ENST00000553286 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
KLC1-212ENST00000553286 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
KLC1-212ENST00000553286 EEA1Q15075 1411 aa24.68■■□□□ 1.54
KLC1-212ENST00000553286 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
KLC1-212ENST00000553286 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
KLC1-212ENST00000553286 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
KLC1-212ENST00000553286 VPS8Q8N3P4 1428 aa24.59■■□□□ 1.53
KLC1-212ENST00000553286 BCANQ96GW7 911 aa24.58■■□□□ 1.53
KLC1-212ENST00000553286 KCNH8Q96L42 1107 aa24.57■■□□□ 1.52
KLC1-212ENST00000553286 HIRIP3Q9BW71 556 aaPredicted RBP24.53■■□□□ 1.52
KLC1-212ENST00000553286 P3H3Q8IVL6 736 aa24.5■■□□□ 1.51
KLC1-212ENST00000553286 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
KLC1-212ENST00000553286 KIF21BO75037 1637 aa24.43■■□□□ 1.5
KLC1-212ENST00000553286 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
KLC1-212ENST00000553286 FAM50AQ14320 339 aaKnown RBP24.39■■□□□ 1.49
KLC1-212ENST00000553286 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
KLC1-212ENST00000553286 SUPT16HQ9Y5B9 1047 aaKnown RBP24.38■■□□□ 1.49
KLC1-212ENST00000553286 SIN3AQ96ST3 1273 aa24.33■■□□□ 1.49
KLC1-212ENST00000553286 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.48
KLC1-212ENST00000553286 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
KLC1-212ENST00000553286 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
KLC1-212ENST00000553286 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
KLC1-212ENST00000553286 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
KLC1-212ENST00000553286 FKBP8Q14318 412 aa24.15■■□□□ 1.46
KLC1-212ENST00000553286 RAB3GAP2Q9H2M9 1393 aa24.12■■□□□ 1.45
KLC1-212ENST00000553286 TSHZ2Q9NRE2 1034 aa24.08■■□□□ 1.45
KLC1-212ENST00000553286 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
KLC1-212ENST00000553286 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
KLC1-212ENST00000553286 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
KLC1-212ENST00000553286 MYT1Q01538 1121 aa24.01■■□□□ 1.43
KLC1-212ENST00000553286 CUX1P39880 1505 aa23.99■■□□□ 1.43
KLC1-212ENST00000553286 CNGB1Q14028 1251 aaPredicted RBP23.99■■□□□ 1.43
KLC1-212ENST00000553286 CLSPNQ9HAW4 1339 aa23.99■■□□□ 1.43
KLC1-212ENST00000553286 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
KLC1-212ENST00000553286 IRX6P78412 446 aaPredicted RBP23.97■■□□□ 1.43
KLC1-212ENST00000553286 CUX2O14529 1486 aa23.96■■□□□ 1.43
KLC1-212ENST00000553286 ARID3CA6NKF2 412 aa23.95■■□□□ 1.43
KLC1-212ENST00000553286 RRBP1Q9P2E9 1410 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms