RNA–Protein interactions for RNA: ENST00000552943.5

WDR90-224, Transcript of WD repeat domain 90, humanhuman

TSL 1 (best)

Gene WDR90, Length 5,498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-224ENST00000552943 DCAF8L2P0C7V8 631 aa34■■■■□ 3.03
WDR90-224ENST00000552943 NISCHQ9Y2I1 1504 aa33.76■■■□□ 2.99
WDR90-224ENST00000552943 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
WDR90-224ENST00000552943 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
WDR90-224ENST00000552943 EHMT2Q96KQ7 1210 aa31.16■■■□□ 2.58
WDR90-224ENST00000552943 APLP2Q06481 763 aa30.65■■■□□ 2.5
WDR90-224ENST00000552943 FAM9AQ8IZU1 332 aaPredicted RBP30.6■■■□□ 2.49
WDR90-224ENST00000552943 PCGF6Q9BYE7 350 aa30.35■■■□□ 2.45
WDR90-224ENST00000552943 TRIM41Q8WV44 630 aa30.24■■■□□ 2.43
WDR90-224ENST00000552943 PELP1Q8IZL8 1130 aaKnown RBP30.17■■■□□ 2.42
WDR90-224ENST00000552943 TTBK1Q5TCY1 1321 aaPredicted RBP30.13■■■□□ 2.41
WDR90-224ENST00000552943 ZEB1P37275 1124 aaPredicted RBP29.9■■■□□ 2.38
WDR90-224ENST00000552943 RANGAP1P46060 587 aaPredicted RBP29.84■■■□□ 2.37
WDR90-224ENST00000552943 UBTFP17480 764 aaKnown RBP29.73■■■□□ 2.35
WDR90-224ENST00000552943 CCER1Q8TC90 406 aaPredicted RBP29.72■■■□□ 2.35
WDR90-224ENST00000552943 ATP1B4Q9UN42 357 aaPredicted RBP29.52■■■□□ 2.32
WDR90-224ENST00000552943 CENPBP07199 599 aaPredicted RBP29.51■■■□□ 2.31
WDR90-224ENST00000552943 TRIM26Q12899 539 aaPredicted RBP29.28■■■□□ 2.28
WDR90-224ENST00000552943 CHIC1Q5VXU3 224 aa29.25■■■□□ 2.27
WDR90-224ENST00000552943 PPARGC1BQ86YN6 1023 aaKnown RBP29.21■■■□□ 2.27
WDR90-224ENST00000552943 LOC105371045A0A1W2PR82 267 aa29.07■■■□□ 2.24
WDR90-224ENST00000552943 HRCP23327 699 aa28.96■■■□□ 2.23
WDR90-224ENST00000552943 YTHDC1Q96MU7 727 aaKnown RBP28.86■■■□□ 2.21
WDR90-224ENST00000552943 ERICH6Q7L0X2 663 aa28.79■■■□□ 2.2
WDR90-224ENST00000552943 NEFLP07196 543 aa28.76■■■□□ 2.2
WDR90-224ENST00000552943 ABCC9O60706 1549 aa28.69■■■□□ 2.18
WDR90-224ENST00000552943 ITGAEP38570 1179 aa28.66■■■□□ 2.18
WDR90-224ENST00000552943 MYT1Q01538 1121 aa28.61■■■□□ 2.17
WDR90-224ENST00000552943 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
WDR90-224ENST00000552943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.51■■■□□ 2.16
WDR90-224ENST00000552943 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
WDR90-224ENST00000552943 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
WDR90-224ENST00000552943 POLR3GLQ9BT43 218 aa28.19■■■□□ 2.1
WDR90-224ENST00000552943 DIEXFQ68CQ4 756 aaKnown RBP28.08■■■□□ 2.09
WDR90-224ENST00000552943 FAM50AQ14320 339 aaKnown RBP28.05■■■□□ 2.08
WDR90-224ENST00000552943 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
WDR90-224ENST00000552943 CNGB1Q14028 1251 aaPredicted RBP27.87■■■□□ 2.05
WDR90-224ENST00000552943 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
WDR90-224ENST00000552943 TRIM52Q96A61 297 aa27.81■■■□□ 2.04
WDR90-224ENST00000552943 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
WDR90-224ENST00000552943 NEUROD1Q13562 356 aa27.76■■■□□ 2.03
WDR90-224ENST00000552943 CCDC180Q9P1Z9 1646 aa27.73■■■□□ 2.03
WDR90-224ENST00000552943 DAXXQ9UER7 740 aaPredicted RBP27.71■■■□□ 2.03
WDR90-224ENST00000552943 SLC4A1APQ9BWU0 796 aaKnown RBP27.56■■■□□ 2
WDR90-224ENST00000552943 ZNF316A6NFI3 1004 aaPredicted RBP27.56■■■□□ 2
WDR90-224ENST00000552943 FBLN2P98095 1184 aa27.5■■□□□ 1.99
WDR90-224ENST00000552943 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
WDR90-224ENST00000552943 ANP32CO43423 234 aa27.48■■□□□ 1.99
WDR90-224ENST00000552943 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
WDR90-224ENST00000552943 ZNF326Q5BKZ1 582 aaKnown RBP27.4■■□□□ 1.98
WDR90-224ENST00000552943 GTF3C3Q9Y5Q9 886 aa27.38■■□□□ 1.97
WDR90-224ENST00000552943 ARID3CA6NKF2 412 aa27.27■■□□□ 1.96
WDR90-224ENST00000552943 CLSPNQ9HAW4 1339 aa27.24■■□□□ 1.95
WDR90-224ENST00000552943 BCANQ96GW7 911 aa27.21■■□□□ 1.95
WDR90-224ENST00000552943 CDK11AQ9UQ88 783 aaPredicted RBP27.19■■□□□ 1.94
WDR90-224ENST00000552943 ACIN1Q9UKV3 1341 aaKnown RBP27.12■■□□□ 1.93
WDR90-224ENST00000552943 RTL5Q5HYW3 569 aaPredicted RBP27.12■■□□□ 1.93
WDR90-224ENST00000552943 ZNF777Q9ULD5 760 aaPredicted RBP27.12■■□□□ 1.93
WDR90-224ENST00000552943 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
WDR90-224ENST00000552943 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
WDR90-224ENST00000552943 TONSLQ96HA7 1378 aa26.99■■□□□ 1.91
WDR90-224ENST00000552943 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
WDR90-224ENST00000552943 NACADO15069 1562 aa26.91■■□□□ 1.9
WDR90-224ENST00000552943 CLIP1P30622 1438 aa26.9■■□□□ 1.9
WDR90-224ENST00000552943 EEA1Q15075 1411 aa26.88■■□□□ 1.89
WDR90-224ENST00000552943 CANXP27824 592 aaKnown RBP26.79■■□□□ 1.88
WDR90-224ENST00000552943 GOLGA3Q08378 1498 aa26.78■■□□□ 1.88
WDR90-224ENST00000552943 DDX10Q13206 875 aaKnown RBP26.75■■□□□ 1.87
WDR90-224ENST00000552943 ZBTB47Q9UFB7 747 aaPredicted RBP26.75■■□□□ 1.87
WDR90-224ENST00000552943 CHIC2Q9UKJ5 165 aa26.74■■□□□ 1.87
WDR90-224ENST00000552943 MTUS2Q5JR59 1369 aa26.74■■□□□ 1.87
WDR90-224ENST00000552943 CEP162Q5TB80 1403 aa26.74■■□□□ 1.87
WDR90-224ENST00000552943 NEFMP07197 916 aa26.72■■□□□ 1.87
WDR90-224ENST00000552943 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
WDR90-224ENST00000552943 BAZ1BQ9UIG0 1483 aaKnown RBP26.65■■□□□ 1.86
WDR90-224ENST00000552943 HNRNPUQ00839 825 aaKnown RBP eCLIP26.63■■□□□ 1.85
WDR90-224ENST00000552943 FKBP8Q14318 412 aa26.62■■□□□ 1.85
WDR90-224ENST00000552943 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
WDR90-224ENST00000552943 TSPY4P0CV99 314 aa26.57■■□□□ 1.84
WDR90-224ENST00000552943 TSPY10P0CW01 314 aa26.57■■□□□ 1.84
WDR90-224ENST00000552943 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
WDR90-224ENST00000552943 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
WDR90-224ENST00000552943 NPM1P06748 294 aaKnown RBP eCLIP26.55■■□□□ 1.84
WDR90-224ENST00000552943 FAM9BQ8IZU0 186 aa26.55■■□□□ 1.84
WDR90-224ENST00000552943 CHGAP10645 457 aaKnown RBP26.55■■□□□ 1.84
WDR90-224ENST00000552943 ANP32AP39687 249 aaKnown RBP26.54■■□□□ 1.84
WDR90-224ENST00000552943 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
WDR90-224ENST00000552943 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
WDR90-224ENST00000552943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.5■■□□□ 1.83
WDR90-224ENST00000552943 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
WDR90-224ENST00000552943 ESF1Q9H501 851 aaKnown RBP26.49■■□□□ 1.83
WDR90-224ENST00000552943 MIER1Q8N108 512 aa26.45■■□□□ 1.83
WDR90-224ENST00000552943 STAG3Q9UJ98 1225 aa26.43■■□□□ 1.82
WDR90-224ENST00000552943 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
WDR90-224ENST00000552943 TMC1Q8TDI8 760 aa26.42■■□□□ 1.82
WDR90-224ENST00000552943 BCL11AQ9H165 835 aa26.41■■□□□ 1.82
WDR90-224ENST00000552943 RRP7BPQ9NSQ0 103 aa26.41■■□□□ 1.82
WDR90-224ENST00000552943 KDM2AQ9Y2K7 1162 aa26.38■■□□□ 1.81
WDR90-224ENST00000552943 MRS2Q9HD23 443 aa26.37■■□□□ 1.81
WDR90-224ENST00000552943 EIF4G2P78344 907 aaKnown RBP eCLIP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms