RNA–Protein interactions for RNA: ENST00000552501.1

PCNPP1-201, Transcript of PEST containing nuclear protein pseudogene 1, humanhuman

BASIC

Gene PCNPP1, Length 511 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP1-201ENST00000552501 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
PCNPP1-201ENST00000552501 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
PCNPP1-201ENST00000552501 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
PCNPP1-201ENST00000552501 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
PCNPP1-201ENST00000552501 FOXD1Q16676 465 aa21.09■□□□□ 0.97
PCNPP1-201ENST00000552501 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
PCNPP1-201ENST00000552501 MSH5O43196 834 aa19.87■□□□□ 0.77
PCNPP1-201ENST00000552501 PIAS4Q8N2W9 510 aaPredicted RBP19.84■□□□□ 0.77
PCNPP1-201ENST00000552501 ADRA2BP18089 450 aa19.73■□□□□ 0.75
PCNPP1-201ENST00000552501 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
PCNPP1-201ENST00000552501 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
PCNPP1-201ENST00000552501 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
PCNPP1-201ENST00000552501 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
PCNPP1-201ENST00000552501 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
PCNPP1-201ENST00000552501 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
PCNPP1-201ENST00000552501 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
PCNPP1-201ENST00000552501 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
PCNPP1-201ENST00000552501 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
PCNPP1-201ENST00000552501 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
PCNPP1-201ENST00000552501 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
PCNPP1-201ENST00000552501 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
PCNPP1-201ENST00000552501 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
PCNPP1-201ENST00000552501 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
PCNPP1-201ENST00000552501 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
PCNPP1-201ENST00000552501 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
PCNPP1-201ENST00000552501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCNPP1-201ENST00000552501 KCNA4P22459 653 aa16.68■□□□□ 0.26
PCNPP1-201ENST00000552501 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
PCNPP1-201ENST00000552501 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
PCNPP1-201ENST00000552501 APLP2Q06481 763 aa16.07■□□□□ 0.16
PCNPP1-201ENST00000552501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
PCNPP1-201ENST00000552501 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
PCNPP1-201ENST00000552501 CAPN15O75808 1086 aa16.02■□□□□ 0.16
PCNPP1-201ENST00000552501 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
PCNPP1-201ENST00000552501 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
PCNPP1-201ENST00000552501 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
PCNPP1-201ENST00000552501 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
PCNPP1-201ENST00000552501 DSG3P32926 999 aa15.81■□□□□ 0.12
PCNPP1-201ENST00000552501 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
PCNPP1-201ENST00000552501 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
PCNPP1-201ENST00000552501 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
PCNPP1-201ENST00000552501 ABCB7O75027 752 aa15.59■□□□□ 0.09
PCNPP1-201ENST00000552501 POLA2Q14181 598 aa15.35■□□□□ 0.05
PCNPP1-201ENST00000552501 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
PCNPP1-201ENST00000552501 ZBTB22O15209 634 aa15.25■□□□□ 0.03
PCNPP1-201ENST00000552501 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
PCNPP1-201ENST00000552501 ATXN8OSP0DMR3 200 aa15.19■□□□□ 0.02
PCNPP1-201ENST00000552501 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
PCNPP1-201ENST00000552501 POTEHQ6S545 545 aa15□□□□□ -0.01
PCNPP1-201ENST00000552501 FBLN2P98095 1184 aa14.87□□□□□ -0.03
PCNPP1-201ENST00000552501 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
PCNPP1-201ENST00000552501 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
PCNPP1-201ENST00000552501 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
PCNPP1-201ENST00000552501 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
PCNPP1-201ENST00000552501 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
PCNPP1-201ENST00000552501 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
PCNPP1-201ENST00000552501 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
PCNPP1-201ENST00000552501 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
PCNPP1-201ENST00000552501 REM2Q8IYK8 340 aaPredicted RBP14.65□□□□□ -0.06
PCNPP1-201ENST00000552501 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
PCNPP1-201ENST00000552501 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
PCNPP1-201ENST00000552501 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
PCNPP1-201ENST00000552501 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
PCNPP1-201ENST00000552501 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
PCNPP1-201ENST00000552501 PIP4P2Q8N4L2 257 aa14.39□□□□□ -0.11
PCNPP1-201ENST00000552501 CLEC11AQ9Y240 323 aa14.34□□□□□ -0.11
PCNPP1-201ENST00000552501 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
PCNPP1-201ENST00000552501 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
PCNPP1-201ENST00000552501 HAX1O00165 279 aa14.18□□□□□ -0.14
PCNPP1-201ENST00000552501 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
PCNPP1-201ENST00000552501 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
PCNPP1-201ENST00000552501 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
PCNPP1-201ENST00000552501 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
PCNPP1-201ENST00000552501 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
PCNPP1-201ENST00000552501 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
PCNPP1-201ENST00000552501 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
PCNPP1-201ENST00000552501 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
PCNPP1-201ENST00000552501 EVX2Q03828 476 aa13.8□□□□□ -0.2
PCNPP1-201ENST00000552501 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
PCNPP1-201ENST00000552501 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
PCNPP1-201ENST00000552501 CLCN6P51797 869 aa13.66□□□□□ -0.22
PCNPP1-201ENST00000552501 GABBR2O75899 941 aa13.63□□□□□ -0.23
PCNPP1-201ENST00000552501 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCNPP1-201ENST00000552501 PROM2Q8N271 834 aa13.63□□□□□ -0.23
PCNPP1-201ENST00000552501 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
PCNPP1-201ENST00000552501 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
PCNPP1-201ENST00000552501 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
PCNPP1-201ENST00000552501 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
PCNPP1-201ENST00000552501 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
PCNPP1-201ENST00000552501 FKBP8Q14318 412 aa13.43□□□□□ -0.26
PCNPP1-201ENST00000552501 MIER1Q8N108 512 aa13.42□□□□□ -0.26
PCNPP1-201ENST00000552501 DCBLD2Q96PD2 775 aa13.42□□□□□ -0.26
PCNPP1-201ENST00000552501 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
PCNPP1-201ENST00000552501 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
PCNPP1-201ENST00000552501 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
PCNPP1-201ENST00000552501 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
PCNPP1-201ENST00000552501 GALR2O43603 387 aaPredicted RBP13.27□□□□□ -0.29
PCNPP1-201ENST00000552501 FBXO3Q9UK99 471 aa13.27□□□□□ -0.29
PCNPP1-201ENST00000552501 LHX8Q68G74 356 aa13.26□□□□□ -0.29
PCNPP1-201ENST00000552501 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms