RNA–Protein interactions for RNA: ENST00000552430.5

LETMD1-232, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 608 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-232ENST00000552430 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
LETMD1-232ENST00000552430 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
LETMD1-232ENST00000552430 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
LETMD1-232ENST00000552430 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
LETMD1-232ENST00000552430 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
LETMD1-232ENST00000552430 FOXD1Q16676 465 aa16.31■□□□□ 0.2
LETMD1-232ENST00000552430 ADRA2BP18089 450 aa15.78■□□□□ 0.12
LETMD1-232ENST00000552430 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
LETMD1-232ENST00000552430 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
LETMD1-232ENST00000552430 MSH5O43196 834 aa14.94□□□□□ -0.02
LETMD1-232ENST00000552430 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
LETMD1-232ENST00000552430 KCNA4P22459 653 aa14.37□□□□□ -0.11
LETMD1-232ENST00000552430 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-232ENST00000552430 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
LETMD1-232ENST00000552430 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
LETMD1-232ENST00000552430 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
LETMD1-232ENST00000552430 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
LETMD1-232ENST00000552430 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
LETMD1-232ENST00000552430 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
LETMD1-232ENST00000552430 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
LETMD1-232ENST00000552430 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
LETMD1-232ENST00000552430 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
LETMD1-232ENST00000552430 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
LETMD1-232ENST00000552430 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
LETMD1-232ENST00000552430 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
LETMD1-232ENST00000552430 ZBTB22O15209 634 aa13.24□□□□□ -0.29
LETMD1-232ENST00000552430 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
LETMD1-232ENST00000552430 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
LETMD1-232ENST00000552430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
LETMD1-232ENST00000552430 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
LETMD1-232ENST00000552430 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
LETMD1-232ENST00000552430 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-232ENST00000552430 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
LETMD1-232ENST00000552430 NISCHQ9Y2I1 1504 aa12.73□□□□□ -0.37
LETMD1-232ENST00000552430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.7□□□□□ -0.38
LETMD1-232ENST00000552430 HNRNPUL2Q1KMD3 747 aaKnown RBP12.7□□□□□ -0.38
LETMD1-232ENST00000552430 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
LETMD1-232ENST00000552430 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
LETMD1-232ENST00000552430 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
LETMD1-232ENST00000552430 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
LETMD1-232ENST00000552430 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
LETMD1-232ENST00000552430 APLP2Q06481 763 aa12.54□□□□□ -0.4
LETMD1-232ENST00000552430 CAPN15O75808 1086 aa12.52□□□□□ -0.41
LETMD1-232ENST00000552430 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
LETMD1-232ENST00000552430 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
LETMD1-232ENST00000552430 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
LETMD1-232ENST00000552430 ABCB7O75027 752 aa12.34□□□□□ -0.43
LETMD1-232ENST00000552430 POLA2Q14181 598 aa12.28□□□□□ -0.44
LETMD1-232ENST00000552430 DSG3P32926 999 aa12.25□□□□□ -0.45
LETMD1-232ENST00000552430 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-232ENST00000552430 FBLN2P98095 1184 aa12.03□□□□□ -0.48
LETMD1-232ENST00000552430 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
LETMD1-232ENST00000552430 FKBP8Q14318 412 aa11.94□□□□□ -0.5
LETMD1-232ENST00000552430 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
LETMD1-232ENST00000552430 ABCC9O60706 1549 aa11.86□□□□□ -0.51
LETMD1-232ENST00000552430 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
LETMD1-232ENST00000552430 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
LETMD1-232ENST00000552430 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
LETMD1-232ENST00000552430 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
LETMD1-232ENST00000552430 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
LETMD1-232ENST00000552430 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
LETMD1-232ENST00000552430 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
LETMD1-232ENST00000552430 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
LETMD1-232ENST00000552430 PROM2Q8N271 834 aa11.58□□□□□ -0.56
LETMD1-232ENST00000552430 CCDC180Q9P1Z9 1646 aa11.51□□□□□ -0.57
LETMD1-232ENST00000552430 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
LETMD1-232ENST00000552430 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
LETMD1-232ENST00000552430 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
LETMD1-232ENST00000552430 CLEC11AQ9Y240 323 aa11.38□□□□□ -0.59
LETMD1-232ENST00000552430 SPDYE1Q8NFV5 336 aaPredicted RBP11.35□□□□□ -0.59
LETMD1-232ENST00000552430 PITPNM1O00562 1244 aa11.34□□□□□ -0.59
LETMD1-232ENST00000552430 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-232ENST00000552430 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
LETMD1-232ENST00000552430 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
LETMD1-232ENST00000552430 MIER1Q8N108 512 aa11.2□□□□□ -0.62
LETMD1-232ENST00000552430 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
LETMD1-232ENST00000552430 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
LETMD1-232ENST00000552430 IFNLR1Q8IU57 520 aaPredicted RBP11.17□□□□□ -0.62
LETMD1-232ENST00000552430 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
LETMD1-232ENST00000552430 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
LETMD1-232ENST00000552430 CHADLQ6NUI6 762 aa11.11□□□□□ -0.63
LETMD1-232ENST00000552430 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
LETMD1-232ENST00000552430 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
LETMD1-232ENST00000552430 DCAF8L2P0C7V8 631 aa11.08□□□□□ -0.64
LETMD1-232ENST00000552430 FXR2P51116 673 aaKnown RBP eCLIP11.06□□□□□ -0.64
LETMD1-232ENST00000552430 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
LETMD1-232ENST00000552430 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
LETMD1-232ENST00000552430 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
LETMD1-232ENST00000552430 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
LETMD1-232ENST00000552430 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
LETMD1-232ENST00000552430 NACADO15069 1562 aa10.99□□□□□ -0.65
LETMD1-232ENST00000552430 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-232ENST00000552430 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
LETMD1-232ENST00000552430 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
LETMD1-232ENST00000552430 NUBP1P53384 320 aa10.9□□□□□ -0.66
LETMD1-232ENST00000552430 POTEHQ6S545 545 aa10.9□□□□□ -0.66
LETMD1-232ENST00000552430 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
LETMD1-232ENST00000552430 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
LETMD1-232ENST00000552430 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
LETMD1-232ENST00000552430 PKD2Q13563 968 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms