RNA–Protein interactions for RNA: ENST00000551702.5

HNRNPA1-213, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 3

Gene HNRNPA1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-213ENST00000551702 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
HNRNPA1-213ENST00000551702 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
HNRNPA1-213ENST00000551702 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
HNRNPA1-213ENST00000551702 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
HNRNPA1-213ENST00000551702 FOXD1Q16676 465 aa15.82■□□□□ 0.12
HNRNPA1-213ENST00000551702 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
HNRNPA1-213ENST00000551702 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
HNRNPA1-213ENST00000551702 MSH5O43196 834 aa14.77□□□□□ -0.05
HNRNPA1-213ENST00000551702 ADRA2BP18089 450 aa14.77□□□□□ -0.05
HNRNPA1-213ENST00000551702 PIAS4Q8N2W9 510 aaPredicted RBP14.75□□□□□ -0.05
HNRNPA1-213ENST00000551702 POTEDQ86YR6 584 aa14.29□□□□□ -0.12
HNRNPA1-213ENST00000551702 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
HNRNPA1-213ENST00000551702 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
HNRNPA1-213ENST00000551702 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
HNRNPA1-213ENST00000551702 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
HNRNPA1-213ENST00000551702 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
HNRNPA1-213ENST00000551702 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
HNRNPA1-213ENST00000551702 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
HNRNPA1-213ENST00000551702 DCAF8L1A6NGE4 600 aa12.8□□□□□ -0.36
HNRNPA1-213ENST00000551702 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
HNRNPA1-213ENST00000551702 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
HNRNPA1-213ENST00000551702 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
HNRNPA1-213ENST00000551702 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
HNRNPA1-213ENST00000551702 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
HNRNPA1-213ENST00000551702 KCNA4P22459 653 aa12.45□□□□□ -0.42
HNRNPA1-213ENST00000551702 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
HNRNPA1-213ENST00000551702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.444e-8■□□□□ 8.9
HNRNPA1-213ENST00000551702 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
HNRNPA1-213ENST00000551702 SLC4A2P04920 1241 aa12.09□□□□□ -0.47
HNRNPA1-213ENST00000551702 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
HNRNPA1-213ENST00000551702 CAPN15O75808 1086 aa11.84□□□□□ -0.51
HNRNPA1-213ENST00000551702 DSG3P32926 999 aa11.83□□□□□ -0.52
HNRNPA1-213ENST00000551702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
HNRNPA1-213ENST00000551702 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
HNRNPA1-213ENST00000551702 APLP2Q06481 763 aa11.76□□□□□ -0.53
HNRNPA1-213ENST00000551702 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
HNRNPA1-213ENST00000551702 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
HNRNPA1-213ENST00000551702 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
HNRNPA1-213ENST00000551702 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
HNRNPA1-213ENST00000551702 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
HNRNPA1-213ENST00000551702 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
HNRNPA1-213ENST00000551702 ABCB7O75027 752 aa11.59□□□□□ -0.55
HNRNPA1-213ENST00000551702 ZBTB22O15209 634 aa11.5□□□□□ -0.57
HNRNPA1-213ENST00000551702 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
HNRNPA1-213ENST00000551702 POLA2Q14181 598 aa11.41□□□□□ -0.58
HNRNPA1-213ENST00000551702 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
HNRNPA1-213ENST00000551702 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
HNRNPA1-213ENST00000551702 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
HNRNPA1-213ENST00000551702 POTEHQ6S545 545 aa11.2□□□□□ -0.62
HNRNPA1-213ENST00000551702 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
HNRNPA1-213ENST00000551702 AKT1S1Q96B36 256 aa11.04□□□□□ -0.64
HNRNPA1-213ENST00000551702 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
HNRNPA1-213ENST00000551702 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
HNRNPA1-213ENST00000551702 MKRN4PQ13434 485 aaPredicted RBP10.93□□□□□ -0.66
HNRNPA1-213ENST00000551702 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
HNRNPA1-213ENST00000551702 FBLN2P98095 1184 aa10.92□□□□□ -0.66
HNRNPA1-213ENST00000551702 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
HNRNPA1-213ENST00000551702 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
HNRNPA1-213ENST00000551702 SPDYE2Q495Y8 402 aa10.87□□□□□ -0.67
HNRNPA1-213ENST00000551702 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
HNRNPA1-213ENST00000551702 EHMT2Q96KQ7 1210 aa10.81□□□□□ -0.68
HNRNPA1-213ENST00000551702 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
HNRNPA1-213ENST00000551702 PIP4P2Q8N4L2 257 aa10.76□□□□□ -0.69
HNRNPA1-213ENST00000551702 FXR2P51116 673 aaKnown RBP eCLIP10.73□□□□□ -0.69
HNRNPA1-213ENST00000551702 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
HNRNPA1-213ENST00000551702 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
HNRNPA1-213ENST00000551702 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
HNRNPA1-213ENST00000551702 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
HNRNPA1-213ENST00000551702 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
HNRNPA1-213ENST00000551702 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
HNRNPA1-213ENST00000551702 HAX1O00165 279 aa10.48□□□□□ -0.73
HNRNPA1-213ENST00000551702 PRR29P0C7W0 189 aa10.42□□□□□ -0.74
HNRNPA1-213ENST00000551702 EVX2Q03828 476 aa10.42□□□□□ -0.74
HNRNPA1-213ENST00000551702 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
HNRNPA1-213ENST00000551702 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
HNRNPA1-213ENST00000551702 C19orf67A6NJJ6 358 aa10.38□□□□□ -0.75
HNRNPA1-213ENST00000551702 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
HNRNPA1-213ENST00000551702 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
HNRNPA1-213ENST00000551702 PROM2Q8N271 834 aa10.26□□□□□ -0.77
HNRNPA1-213ENST00000551702 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
HNRNPA1-213ENST00000551702 GABBR2O75899 941 aa10.18□□□□□ -0.78
HNRNPA1-213ENST00000551702 CD44P16070 742 aaKnown RBP10.17□□□□□ -0.78
HNRNPA1-213ENST00000551702 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
HNRNPA1-213ENST00000551702 CLCN6P51797 869 aa10.08□□□□□ -0.8
HNRNPA1-213ENST00000551702 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
HNRNPA1-213ENST00000551702 ZRANB1Q9UGI0 708 aa10.03□□□□□ -0.8
HNRNPA1-213ENST00000551702 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
HNRNPA1-213ENST00000551702 POTEIP0CG38 1075 aa10□□□□□ -0.81
HNRNPA1-213ENST00000551702 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
HNRNPA1-213ENST00000551702 GALR2O43603 387 aaPredicted RBP9.91□□□□□ -0.82
HNRNPA1-213ENST00000551702 FKBP8Q14318 412 aa9.91□□□□□ -0.82
HNRNPA1-213ENST00000551702 PHF12Q96QT6 1004 aa9.91□□□□□ -0.82
HNRNPA1-213ENST00000551702 MIER1Q8N108 512 aa9.87□□□□□ -0.83
HNRNPA1-213ENST00000551702 DCBLD2Q96PD2 775 aa9.87□□□□□ -0.83
HNRNPA1-213ENST00000551702 LHX8Q68G74 356 aa9.86□□□□□ -0.83
HNRNPA1-213ENST00000551702 CCDC61Q9Y6R9 512 aa9.84□□□□□ -0.83
HNRNPA1-213ENST00000551702 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
HNRNPA1-213ENST00000551702 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
HNRNPA1-213ENST00000551702 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
HNRNPA1-213ENST00000551702 PLCD3Q8N3E9 789 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms