RNA–Protein interactions for RNA: ENST00000551280.1

LINC02258-201, Transcript of long intergenic non-protein coding RNA 2258, humanhuman

TSL 2 BASIC

Gene LINC02258, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02258-201ENST00000551280 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
LINC02258-201ENST00000551280 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
LINC02258-201ENST00000551280 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
LINC02258-201ENST00000551280 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
LINC02258-201ENST00000551280 FOXD1Q16676 465 aa21.26■□□□□ 0.99
LINC02258-201ENST00000551280 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
LINC02258-201ENST00000551280 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
LINC02258-201ENST00000551280 ADRA2BP18089 450 aa20.19■□□□□ 0.82
LINC02258-201ENST00000551280 PIAS4Q8N2W9 510 aaPredicted RBP19.97■□□□□ 0.79
LINC02258-201ENST00000551280 MSH5O43196 834 aa19.74■□□□□ 0.75
LINC02258-201ENST00000551280 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
LINC02258-201ENST00000551280 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
LINC02258-201ENST00000551280 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
LINC02258-201ENST00000551280 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
LINC02258-201ENST00000551280 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
LINC02258-201ENST00000551280 CNKSR2Q8WXI2 1034 aa18.05■□□□□ 0.48
LINC02258-201ENST00000551280 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
LINC02258-201ENST00000551280 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
LINC02258-201ENST00000551280 RNF216Q9NWF9 866 aaPredicted RBP17.77■□□□□ 0.44
LINC02258-201ENST00000551280 KCNA4P22459 653 aa17.72■□□□□ 0.43
LINC02258-201ENST00000551280 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
LINC02258-201ENST00000551280 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
LINC02258-201ENST00000551280 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
LINC02258-201ENST00000551280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC02258-201ENST00000551280 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
LINC02258-201ENST00000551280 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
LINC02258-201ENST00000551280 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
LINC02258-201ENST00000551280 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
LINC02258-201ENST00000551280 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
LINC02258-201ENST00000551280 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
LINC02258-201ENST00000551280 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
LINC02258-201ENST00000551280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
LINC02258-201ENST00000551280 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
LINC02258-201ENST00000551280 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
LINC02258-201ENST00000551280 ZBTB22O15209 634 aa16.3■□□□□ 0.2
LINC02258-201ENST00000551280 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
LINC02258-201ENST00000551280 APLP2Q06481 763 aa16.22■□□□□ 0.19
LINC02258-201ENST00000551280 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
LINC02258-201ENST00000551280 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
LINC02258-201ENST00000551280 CAPN15O75808 1086 aa16.13■□□□□ 0.17
LINC02258-201ENST00000551280 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
LINC02258-201ENST00000551280 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
LINC02258-201ENST00000551280 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
LINC02258-201ENST00000551280 DSG3P32926 999 aa15.96■□□□□ 0.15
LINC02258-201ENST00000551280 ATXN8OSP0DMR3 200 aa15.9■□□□□ 0.14
LINC02258-201ENST00000551280 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
LINC02258-201ENST00000551280 ABCB7O75027 752 aa15.78■□□□□ 0.12
LINC02258-201ENST00000551280 POLA2Q14181 598 aa15.7■□□□□ 0.1
LINC02258-201ENST00000551280 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
LINC02258-201ENST00000551280 FBLN2P98095 1184 aa15.25■□□□□ 0.03
LINC02258-201ENST00000551280 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
LINC02258-201ENST00000551280 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
LINC02258-201ENST00000551280 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
LINC02258-201ENST00000551280 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
LINC02258-201ENST00000551280 SPDYE6P0CI01 402 aa15□□□□□ -0.01
LINC02258-201ENST00000551280 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
LINC02258-201ENST00000551280 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
LINC02258-201ENST00000551280 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
LINC02258-201ENST00000551280 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
LINC02258-201ENST00000551280 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
LINC02258-201ENST00000551280 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
LINC02258-201ENST00000551280 CHRDL2Q6WN34 429 aa14.68□□□□□ -0.06
LINC02258-201ENST00000551280 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
LINC02258-201ENST00000551280 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
LINC02258-201ENST00000551280 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
LINC02258-201ENST00000551280 POTEHQ6S545 545 aa14.52□□□□□ -0.09
LINC02258-201ENST00000551280 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
LINC02258-201ENST00000551280 PROM2Q8N271 834 aa14.49□□□□□ -0.09
LINC02258-201ENST00000551280 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
LINC02258-201ENST00000551280 FKBP8Q14318 412 aa14.46□□□□□ -0.09
LINC02258-201ENST00000551280 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
LINC02258-201ENST00000551280 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
LINC02258-201ENST00000551280 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
LINC02258-201ENST00000551280 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
LINC02258-201ENST00000551280 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
LINC02258-201ENST00000551280 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
LINC02258-201ENST00000551280 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
LINC02258-201ENST00000551280 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
LINC02258-201ENST00000551280 HAX1O00165 279 aa14.02□□□□□ -0.17
LINC02258-201ENST00000551280 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
LINC02258-201ENST00000551280 MIER1Q8N108 512 aa13.98□□□□□ -0.17
LINC02258-201ENST00000551280 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
LINC02258-201ENST00000551280 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
LINC02258-201ENST00000551280 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
LINC02258-201ENST00000551280 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
LINC02258-201ENST00000551280 EVX2Q03828 476 aa13.9□□□□□ -0.18
LINC02258-201ENST00000551280 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
LINC02258-201ENST00000551280 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
LINC02258-201ENST00000551280 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
LINC02258-201ENST00000551280 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
LINC02258-201ENST00000551280 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
LINC02258-201ENST00000551280 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
LINC02258-201ENST00000551280 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
LINC02258-201ENST00000551280 RTN4Q9NQC3 1192 aaKnown RBP13.72□□□□□ -0.21
LINC02258-201ENST00000551280 NUBP1P53384 320 aa13.68□□□□□ -0.22
LINC02258-201ENST00000551280 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
LINC02258-201ENST00000551280 CLCN6P51797 869 aa13.66□□□□□ -0.22
LINC02258-201ENST00000551280 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
LINC02258-201ENST00000551280 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
LINC02258-201ENST00000551280 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms