RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
GPN3-209ENST00000551079 CHIC1Q5VXU3 224 aa27.58■■■□□ 2.01
GPN3-209ENST00000551079 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
GPN3-209ENST00000551079 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
GPN3-209ENST00000551079 FOXD1Q16676 465 aa22.48■■□□□ 1.19
GPN3-209ENST00000551079 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
GPN3-209ENST00000551079 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
GPN3-209ENST00000551079 ADRA2BP18089 450 aa21.4■■□□□ 1.02
GPN3-209ENST00000551079 POTEDQ86YR6 584 aa21.22■□□□□ 0.99
GPN3-209ENST00000551079 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
GPN3-209ENST00000551079 MSH5O43196 834 aa20.89■□□□□ 0.93
GPN3-209ENST00000551079 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
GPN3-209ENST00000551079 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
GPN3-209ENST00000551079 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
GPN3-209ENST00000551079 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
GPN3-209ENST00000551079 CNKSR2Q8WXI2 1034 aa19.15■□□□□ 0.66
GPN3-209ENST00000551079 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
GPN3-209ENST00000551079 KCNA4P22459 653 aa18.87■□□□□ 0.61
GPN3-209ENST00000551079 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
GPN3-209ENST00000551079 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
GPN3-209ENST00000551079 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
GPN3-209ENST00000551079 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
GPN3-209ENST00000551079 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
GPN3-209ENST00000551079 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
GPN3-209ENST00000551079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.469e-6■■■□□ 18.9
GPN3-209ENST00000551079 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
GPN3-209ENST00000551079 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
GPN3-209ENST00000551079 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
GPN3-209ENST00000551079 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
GPN3-209ENST00000551079 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
GPN3-209ENST00000551079 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
GPN3-209ENST00000551079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
GPN3-209ENST00000551079 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
GPN3-209ENST00000551079 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
GPN3-209ENST00000551079 ZBTB22O15209 634 aa17.32■□□□□ 0.36
GPN3-209ENST00000551079 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
GPN3-209ENST00000551079 APLP2Q06481 763 aa17.26■□□□□ 0.35
GPN3-209ENST00000551079 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
GPN3-209ENST00000551079 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
GPN3-209ENST00000551079 CAPN15O75808 1086 aa17.14■□□□□ 0.33
GPN3-209ENST00000551079 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
GPN3-209ENST00000551079 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
GPN3-209ENST00000551079 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
GPN3-209ENST00000551079 ATXN8OSP0DMR3 200 aa16.91■□□□□ 0.3
GPN3-209ENST00000551079 DSG3P32926 999 aa16.89■□□□□ 0.29
GPN3-209ENST00000551079 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
GPN3-209ENST00000551079 ABCB7O75027 752 aa16.75■□□□□ 0.27
GPN3-209ENST00000551079 POLA2Q14181 598 aa16.66■□□□□ 0.26
GPN3-209ENST00000551079 POTEHQ6S545 545 aa16.44■□□□□ 0.22
GPN3-209ENST00000551079 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
GPN3-209ENST00000551079 FBLN2P98095 1184 aa16.26■□□□□ 0.19
GPN3-209ENST00000551079 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
GPN3-209ENST00000551079 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
GPN3-209ENST00000551079 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
GPN3-209ENST00000551079 SPDYE2BA6NHP3 402 aa15.93■□□□□ 0.14
GPN3-209ENST00000551079 SPDYE6P0CI01 402 aa15.93■□□□□ 0.14
GPN3-209ENST00000551079 SPDYE2Q495Y8 402 aa15.93■□□□□ 0.14
GPN3-209ENST00000551079 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
GPN3-209ENST00000551079 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
GPN3-209ENST00000551079 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
GPN3-209ENST00000551079 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
GPN3-209ENST00000551079 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
GPN3-209ENST00000551079 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
GPN3-209ENST00000551079 CHRDL2Q6WN34 429 aa15.54■□□□□ 0.08
GPN3-209ENST00000551079 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
GPN3-209ENST00000551079 PITPNM1O00562 1244 aa15.52■□□□□ 0.08
GPN3-209ENST00000551079 FKBP8Q14318 412 aa15.46■□□□□ 0.07
GPN3-209ENST00000551079 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
GPN3-209ENST00000551079 PROM2Q8N271 834 aa15.38■□□□□ 0.05
GPN3-209ENST00000551079 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
GPN3-209ENST00000551079 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
GPN3-209ENST00000551079 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
GPN3-209ENST00000551079 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
GPN3-209ENST00000551079 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
GPN3-209ENST00000551079 CHADLQ6NUI6 762 aa15.06■□□□□ 0
GPN3-209ENST00000551079 FBXO3Q9UK99 471 aa15.05■□□□□ -0
GPN3-209ENST00000551079 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
GPN3-209ENST00000551079 SP7Q8TDD2 431 aaPredicted RBP14.97□□□□□ -0.01
GPN3-209ENST00000551079 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
GPN3-209ENST00000551079 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
GPN3-209ENST00000551079 MIER1Q8N108 512 aa14.91□□□□□ -0.02
GPN3-209ENST00000551079 HAX1O00165 279 aa14.87□□□□□ -0.03
GPN3-209ENST00000551079 PLCD3Q8N3E9 789 aa14.87□□□□□ -0.03
GPN3-209ENST00000551079 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
GPN3-209ENST00000551079 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
GPN3-209ENST00000551079 VASPP50552 380 aaPredicted RBP14.79□□□□□ -0.04
GPN3-209ENST00000551079 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.05
GPN3-209ENST00000551079 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
GPN3-209ENST00000551079 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
GPN3-209ENST00000551079 EVX2Q03828 476 aa14.66□□□□□ -0.06
GPN3-209ENST00000551079 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
GPN3-209ENST00000551079 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
GPN3-209ENST00000551079 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
GPN3-209ENST00000551079 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
GPN3-209ENST00000551079 NUBP1P53384 320 aa14.52□□□□□ -0.09
GPN3-209ENST00000551079 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
GPN3-209ENST00000551079 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
GPN3-209ENST00000551079 ZNF579Q8NAF0 562 aaKnown RBP14.5□□□□□ -0.09
GPN3-209ENST00000551079 CLCN6P51797 869 aa14.47□□□□□ -0.09
GPN3-209ENST00000551079 FAM212AQ96EL1 285 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms