RNA–Protein interactions for RNA: ENST00000550963.1

ZFC3H1-209, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 5

Gene ZFC3H1, Length 845 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-209ENST00000550963 AEBP2Q6ZN18 517 aaPredicted RBP31.24■■■□□ 2.59
ZFC3H1-209ENST00000550963 CHIC1Q5VXU3 224 aa30.32■■■□□ 2.44
ZFC3H1-209ENST00000550963 SENP3Q9H4L4 574 aaPredicted RBP26.68■■□□□ 1.86
ZFC3H1-209ENST00000550963 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
ZFC3H1-209ENST00000550963 FOXD1Q16676 465 aa24.7■■□□□ 1.54
ZFC3H1-209ENST00000550963 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
ZFC3H1-209ENST00000550963 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
ZFC3H1-209ENST00000550963 ADRA2BP18089 450 aa23.52■■□□□ 1.36
ZFC3H1-209ENST00000550963 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
ZFC3H1-209ENST00000550963 MSH5O43196 834 aa22.99■■□□□ 1.27
ZFC3H1-209ENST00000550963 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
ZFC3H1-209ENST00000550963 PPP4R3CPQ6ZMV5 832 aa21.57■■□□□ 1.04
ZFC3H1-209ENST00000550963 MAPK8IP2Q13387 824 aaPredicted RBP21.4■■□□□ 1.02
ZFC3H1-209ENST00000550963 POTEDQ86YR6 584 aa21.31■■□□□ 1
ZFC3H1-209ENST00000550963 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
ZFC3H1-209ENST00000550963 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
ZFC3H1-209ENST00000550963 NCBP3Q53F19 620 aaKnown RBP21.02■□□□□ 0.96
ZFC3H1-209ENST00000550963 KCNA4P22459 653 aa20.74■□□□□ 0.91
ZFC3H1-209ENST00000550963 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
ZFC3H1-209ENST00000550963 HOXD11P31277 338 aaPredicted RBP20.66■□□□□ 0.9
ZFC3H1-209ENST00000550963 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
ZFC3H1-209ENST00000550963 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
ZFC3H1-209ENST00000550963 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
ZFC3H1-209ENST00000550963 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
ZFC3H1-209ENST00000550963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.75
ZFC3H1-209ENST00000550963 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
ZFC3H1-209ENST00000550963 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
ZFC3H1-209ENST00000550963 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
ZFC3H1-209ENST00000550963 CACNB1Q02641 598 aaPredicted RBP19.34■□□□□ 0.69
ZFC3H1-209ENST00000550963 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
ZFC3H1-209ENST00000550963 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
ZFC3H1-209ENST00000550963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
ZFC3H1-209ENST00000550963 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
ZFC3H1-209ENST00000550963 MYCNP04198 464 aaPredicted RBP19.1■□□□□ 0.65
ZFC3H1-209ENST00000550963 ZBTB22O15209 634 aa19.03■□□□□ 0.64
ZFC3H1-209ENST00000550963 APLP2Q06481 763 aa19.01■□□□□ 0.63
ZFC3H1-209ENST00000550963 SAMD1Q6SPF0 538 aaPredicted RBP19.01■□□□□ 0.63
ZFC3H1-209ENST00000550963 CAPN15O75808 1086 aa18.86■□□□□ 0.61
ZFC3H1-209ENST00000550963 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
ZFC3H1-209ENST00000550963 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
ZFC3H1-209ENST00000550963 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
ZFC3H1-209ENST00000550963 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
ZFC3H1-209ENST00000550963 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
ZFC3H1-209ENST00000550963 ATXN8OSP0DMR3 200 aa18.6■□□□□ 0.57
ZFC3H1-209ENST00000550963 DSG3P32926 999 aa18.56■□□□□ 0.56
ZFC3H1-209ENST00000550963 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
ZFC3H1-209ENST00000550963 ABCB7O75027 752 aa18.44■□□□□ 0.54
ZFC3H1-209ENST00000550963 POLA2Q14181 598 aa18.33■□□□□ 0.52
ZFC3H1-209ENST00000550963 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
ZFC3H1-209ENST00000550963 FBLN2P98095 1184 aa17.89■□□□□ 0.45
ZFC3H1-209ENST00000550963 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
ZFC3H1-209ENST00000550963 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
ZFC3H1-209ENST00000550963 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
ZFC3H1-209ENST00000550963 SPDYE2BA6NHP3 402 aa17.53■□□□□ 0.4
ZFC3H1-209ENST00000550963 SPDYE6P0CI01 402 aa17.53■□□□□ 0.4
ZFC3H1-209ENST00000550963 SPDYE2Q495Y8 402 aa17.53■□□□□ 0.4
ZFC3H1-209ENST00000550963 AKT1S1Q96B36 256 aa17.48■□□□□ 0.39
ZFC3H1-209ENST00000550963 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
ZFC3H1-209ENST00000550963 SSUH2Q9Y2M2 353 aa17.32■□□□□ 0.36
ZFC3H1-209ENST00000550963 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.36
ZFC3H1-209ENST00000550963 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
ZFC3H1-209ENST00000550963 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
ZFC3H1-209ENST00000550963 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
ZFC3H1-209ENST00000550963 SPDYE1Q8NFV5 336 aaPredicted RBP17.09■□□□□ 0.33
ZFC3H1-209ENST00000550963 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
ZFC3H1-209ENST00000550963 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
ZFC3H1-209ENST00000550963 FKBP8Q14318 412 aa17■□□□□ 0.31
ZFC3H1-209ENST00000550963 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
ZFC3H1-209ENST00000550963 PROM2Q8N271 834 aa16.88■□□□□ 0.29
ZFC3H1-209ENST00000550963 POTEHQ6S545 545 aa16.85■□□□□ 0.29
ZFC3H1-209ENST00000550963 PRR29P0C7W0 189 aa16.84■□□□□ 0.29
ZFC3H1-209ENST00000550963 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.28
ZFC3H1-209ENST00000550963 PIP4P2Q8N4L2 257 aa16.8■□□□□ 0.28
ZFC3H1-209ENST00000550963 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
ZFC3H1-209ENST00000550963 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
ZFC3H1-209ENST00000550963 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
ZFC3H1-209ENST00000550963 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
ZFC3H1-209ENST00000550963 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
ZFC3H1-209ENST00000550963 MIER1Q8N108 512 aa16.42■□□□□ 0.22
ZFC3H1-209ENST00000550963 FARP1Q9Y4F1 1045 aaPredicted RBP16.42■□□□□ 0.22
ZFC3H1-209ENST00000550963 PLCD3Q8N3E9 789 aa16.38■□□□□ 0.21
ZFC3H1-209ENST00000550963 HAX1O00165 279 aa16.37■□□□□ 0.21
ZFC3H1-209ENST00000550963 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
ZFC3H1-209ENST00000550963 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
ZFC3H1-209ENST00000550963 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
ZFC3H1-209ENST00000550963 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
ZFC3H1-209ENST00000550963 C19orf67A6NJJ6 358 aa16.24■□□□□ 0.19
ZFC3H1-209ENST00000550963 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
ZFC3H1-209ENST00000550963 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
ZFC3H1-209ENST00000550963 EVX2Q03828 476 aa16.1■□□□□ 0.17
ZFC3H1-209ENST00000550963 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
ZFC3H1-209ENST00000550963 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
ZFC3H1-209ENST00000550963 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
ZFC3H1-209ENST00000550963 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
ZFC3H1-209ENST00000550963 TSPYL2Q9H2G4 693 aaPredicted RBP15.97■□□□□ 0.15
ZFC3H1-209ENST00000550963 NUBP1P53384 320 aa15.96■□□□□ 0.15
ZFC3H1-209ENST00000550963 RASEFQ8IZ41 740 aa15.96■□□□□ 0.15
ZFC3H1-209ENST00000550963 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
ZFC3H1-209ENST00000550963 CLCN6P51797 869 aa15.92■□□□□ 0.14
ZFC3H1-209ENST00000550963 FAM212AQ96EL1 285 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms