RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-222ENST00000550889 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-222ENST00000550889 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
ATXN2-222ENST00000550889 PHF23Q9BUL5 403 aaPredicted RBP14.84□□□□□ -0.03
ATXN2-222ENST00000550889 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
ATXN2-222ENST00000550889 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
ATXN2-222ENST00000550889 FOXD1Q16676 465 aa13.68□□□□□ -0.22
ATXN2-222ENST00000550889 ADRA2BP18089 450 aa13.13□□□□□ -0.31
ATXN2-222ENST00000550889 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
ATXN2-222ENST00000550889 PIAS4Q8N2W9 510 aaPredicted RBP12.91□□□□□ -0.34
ATXN2-222ENST00000550889 MSH5O43196 834 aa12.62□□□□□ -0.39
ATXN2-222ENST00000550889 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
ATXN2-222ENST00000550889 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
ATXN2-222ENST00000550889 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
ATXN2-222ENST00000550889 KCNA4P22459 653 aa11.74□□□□□ -0.53
ATXN2-222ENST00000550889 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
ATXN2-222ENST00000550889 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
ATXN2-222ENST00000550889 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
ATXN2-222ENST00000550889 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
ATXN2-222ENST00000550889 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
ATXN2-222ENST00000550889 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
ATXN2-222ENST00000550889 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.58
ATXN2-222ENST00000550889 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
ATXN2-222ENST00000550889 NISCHQ9Y2I1 1504 aa11.19□□□□□ -0.62
ATXN2-222ENST00000550889 SLC4A1APQ9BWU0 796 aaKnown RBP11.18□□□□□ -0.62
ATXN2-222ENST00000550889 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
ATXN2-222ENST00000550889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.656e-9■■□□□ 11.5
ATXN2-222ENST00000550889 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
ATXN2-222ENST00000550889 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
ATXN2-222ENST00000550889 RNF39Q9H2S5 420 aa10.81□□□□□ -0.68
ATXN2-222ENST00000550889 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
ATXN2-222ENST00000550889 ZBTB22O15209 634 aa10.79□□□□□ -0.68
ATXN2-222ENST00000550889 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
ATXN2-222ENST00000550889 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
ATXN2-222ENST00000550889 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
ATXN2-222ENST00000550889 C1QBPQ07021 282 aaKnown RBP10.67□□□□□ -0.7
ATXN2-222ENST00000550889 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
ATXN2-222ENST00000550889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
ATXN2-222ENST00000550889 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
ATXN2-222ENST00000550889 SAMD1Q6SPF0 538 aaPredicted RBP10.57□□□□□ -0.72
ATXN2-222ENST00000550889 APLP2Q06481 763 aa10.51□□□□□ -0.73
ATXN2-222ENST00000550889 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
ATXN2-222ENST00000550889 CAPN15O75808 1086 aa10.49□□□□□ -0.73
ATXN2-222ENST00000550889 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
ATXN2-222ENST00000550889 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
ATXN2-222ENST00000550889 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
ATXN2-222ENST00000550889 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
ATXN2-222ENST00000550889 ABCB7O75027 752 aa10.29□□□□□ -0.76
ATXN2-222ENST00000550889 DSG3P32926 999 aa10.28□□□□□ -0.76
ATXN2-222ENST00000550889 POLA2Q14181 598 aa10.21□□□□□ -0.77
ATXN2-222ENST00000550889 ZBTB12Q9Y330 459 aaPredicted RBP10.02□□□□□ -0.8
ATXN2-222ENST00000550889 FBLN2P98095 1184 aa9.99□□□□□ -0.81
ATXN2-222ENST00000550889 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
ATXN2-222ENST00000550889 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
ATXN2-222ENST00000550889 CCDC180Q9P1Z9 1646 aa9.88□□□□□ -0.83
ATXN2-222ENST00000550889 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
ATXN2-222ENST00000550889 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
ATXN2-222ENST00000550889 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
ATXN2-222ENST00000550889 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
ATXN2-222ENST00000550889 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
ATXN2-222ENST00000550889 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
ATXN2-222ENST00000550889 FKBP8Q14318 412 aa9.7□□□□□ -0.86
ATXN2-222ENST00000550889 AKT1S1Q96B36 256 aa9.65□□□□□ -0.86
ATXN2-222ENST00000550889 SSUH2Q9Y2M2 353 aa9.65□□□□□ -0.86
ATXN2-222ENST00000550889 ABCC9O60706 1549 aa9.62□□□□□ -0.87
ATXN2-222ENST00000550889 PABPN1Q86U42 306 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATXN2-222ENST00000550889 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
ATXN2-222ENST00000550889 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
ATXN2-222ENST00000550889 PROM2Q8N271 834 aa9.49□□□□□ -0.89
ATXN2-222ENST00000550889 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
ATXN2-222ENST00000550889 PITPNM1O00562 1244 aa9.48□□□□□ -0.89
ATXN2-222ENST00000550889 CHRDL2Q6WN34 429 aa9.42□□□□□ -0.9
ATXN2-222ENST00000550889 STAG3Q9UJ98 1225 aa9.4□□□□□ -0.9
ATXN2-222ENST00000550889 PRR29P0C7W0 189 aa9.37□□□□□ -0.91
ATXN2-222ENST00000550889 FBXO3Q9UK99 471 aa9.34□□□□□ -0.92
ATXN2-222ENST00000550889 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
ATXN2-222ENST00000550889 ZCCHC6Q5VYS8 1495 aaKnown RBP9.33□□□□□ -0.92
ATXN2-222ENST00000550889 NACADO15069 1562 aa9.32□□□□□ -0.92
ATXN2-222ENST00000550889 DCAF8L2P0C7V8 631 aa9.31□□□□□ -0.92
ATXN2-222ENST00000550889 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
ATXN2-222ENST00000550889 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
ATXN2-222ENST00000550889 DCAF1Q9Y4B6 1507 aa9.29□□□□□ -0.92
ATXN2-222ENST00000550889 FXR2P51116 673 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATXN2-222ENST00000550889 PRKAR2AP13861 404 aaKnown RBP9.25□□□□□ -0.93
ATXN2-222ENST00000550889 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
ATXN2-222ENST00000550889 MIER1Q8N108 512 aa9.24□□□□□ -0.93
ATXN2-222ENST00000550889 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
ATXN2-222ENST00000550889 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
ATXN2-222ENST00000550889 CREBZFQ9NS37 354 aa9.22□□□□□ -0.93
ATXN2-222ENST00000550889 PLEKHG5O94827 1062 aa9.19□□□□□ -0.94
ATXN2-222ENST00000550889 POTEHQ6S545 545 aa9.19□□□□□ -0.94
ATXN2-222ENST00000550889 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
ATXN2-222ENST00000550889 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
ATXN2-222ENST00000550889 MNX1P50219 401 aaPredicted RBP9.1□□□□□ -0.95
ATXN2-222ENST00000550889 ZBTB47Q9UFB7 747 aaPredicted RBP9.09□□□□□ -0.95
ATXN2-222ENST00000550889 IFNLR1Q8IU57 520 aaPredicted RBP9.08□□□□□ -0.96
ATXN2-222ENST00000550889 NPM1P06748 294 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN2-222ENST00000550889 HAX1O00165 279 aa9.03□□□□□ -0.96
ATXN2-222ENST00000550889 BICRAQ9NZM4 1560 aa9□□□□□ -0.97
ATXN2-222ENST00000550889 SPOCK2Q92563 424 aa9□□□□□ -0.97
ATXN2-222ENST00000550889 UNC13AQ9UPW8 1703 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms