RNA–Protein interactions for RNA: ENST00000550815.1

LMBR1L-215, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-215ENST00000550815 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
LMBR1L-215ENST00000550815 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
LMBR1L-215ENST00000550815 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
LMBR1L-215ENST00000550815 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
LMBR1L-215ENST00000550815 FOXD1Q16676 465 aa19.52■□□□□ 0.72
LMBR1L-215ENST00000550815 MSH5O43196 834 aa18.36■□□□□ 0.53
LMBR1L-215ENST00000550815 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
LMBR1L-215ENST00000550815 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
LMBR1L-215ENST00000550815 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
LMBR1L-215ENST00000550815 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.48
LMBR1L-215ENST00000550815 ADRA2BP18089 450 aa18.04■□□□□ 0.48
LMBR1L-215ENST00000550815 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
LMBR1L-215ENST00000550815 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
LMBR1L-215ENST00000550815 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
LMBR1L-215ENST00000550815 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
LMBR1L-215ENST00000550815 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
LMBR1L-215ENST00000550815 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
LMBR1L-215ENST00000550815 HOXD11P31277 338 aaPredicted RBP15.83■□□□□ 0.12
LMBR1L-215ENST00000550815 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
LMBR1L-215ENST00000550815 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
LMBR1L-215ENST00000550815 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
LMBR1L-215ENST00000550815 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
LMBR1L-215ENST00000550815 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
LMBR1L-215ENST00000550815 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
LMBR1L-215ENST00000550815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.021e-7■□□□□ 8.2
LMBR1L-215ENST00000550815 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
LMBR1L-215ENST00000550815 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
LMBR1L-215ENST00000550815 CAPN15O75808 1086 aa14.68□□□□□ -0.06
LMBR1L-215ENST00000550815 KCNA4P22459 653 aa14.65□□□□□ -0.06
LMBR1L-215ENST00000550815 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
LMBR1L-215ENST00000550815 DSG3P32926 999 aa14.57□□□□□ -0.08
LMBR1L-215ENST00000550815 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
LMBR1L-215ENST00000550815 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
LMBR1L-215ENST00000550815 APLP2Q06481 763 aa14.39□□□□□ -0.11
LMBR1L-215ENST00000550815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
LMBR1L-215ENST00000550815 ABCB7O75027 752 aa14.31□□□□□ -0.12
LMBR1L-215ENST00000550815 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
LMBR1L-215ENST00000550815 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
LMBR1L-215ENST00000550815 POTEHQ6S545 545 aa14.3□□□□□ -0.12
LMBR1L-215ENST00000550815 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
LMBR1L-215ENST00000550815 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
LMBR1L-215ENST00000550815 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
LMBR1L-215ENST00000550815 POLA2Q14181 598 aa13.93□□□□□ -0.18
LMBR1L-215ENST00000550815 SLC4A1APQ9BWU0 796 aaKnown RBP13.81□□□□□ -0.2
LMBR1L-215ENST00000550815 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
LMBR1L-215ENST00000550815 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
LMBR1L-215ENST00000550815 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
LMBR1L-215ENST00000550815 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
LMBR1L-215ENST00000550815 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
LMBR1L-215ENST00000550815 OSCARQ8IYS5 282 aa13.48□□□□□ -0.25
LMBR1L-215ENST00000550815 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
LMBR1L-215ENST00000550815 ZBTB22O15209 634 aa13.42□□□□□ -0.26
LMBR1L-215ENST00000550815 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
LMBR1L-215ENST00000550815 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
LMBR1L-215ENST00000550815 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
LMBR1L-215ENST00000550815 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
LMBR1L-215ENST00000550815 FBLN2P98095 1184 aa13.23□□□□□ -0.29
LMBR1L-215ENST00000550815 HAX1O00165 279 aa13.21□□□□□ -0.29
LMBR1L-215ENST00000550815 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
LMBR1L-215ENST00000550815 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
LMBR1L-215ENST00000550815 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
LMBR1L-215ENST00000550815 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
LMBR1L-215ENST00000550815 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
LMBR1L-215ENST00000550815 NISCHQ9Y2I1 1504 aa13.04□□□□□ -0.32
LMBR1L-215ENST00000550815 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
LMBR1L-215ENST00000550815 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
LMBR1L-215ENST00000550815 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
LMBR1L-215ENST00000550815 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
LMBR1L-215ENST00000550815 EVX2Q03828 476 aa12.96□□□□□ -0.33
LMBR1L-215ENST00000550815 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
LMBR1L-215ENST00000550815 PABPN1Q86U42 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
LMBR1L-215ENST00000550815 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
LMBR1L-215ENST00000550815 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
LMBR1L-215ENST00000550815 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
LMBR1L-215ENST00000550815 GABBR2O75899 941 aa12.68□□□□□ -0.38
LMBR1L-215ENST00000550815 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
LMBR1L-215ENST00000550815 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
LMBR1L-215ENST00000550815 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
LMBR1L-215ENST00000550815 LHX8Q68G74 356 aa12.5□□□□□ -0.41
LMBR1L-215ENST00000550815 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
LMBR1L-215ENST00000550815 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
LMBR1L-215ENST00000550815 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
LMBR1L-215ENST00000550815 CLCN6P51797 869 aa12.38□□□□□ -0.43
LMBR1L-215ENST00000550815 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
LMBR1L-215ENST00000550815 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
LMBR1L-215ENST00000550815 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
LMBR1L-215ENST00000550815 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
LMBR1L-215ENST00000550815 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
LMBR1L-215ENST00000550815 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
LMBR1L-215ENST00000550815 ABCC9O60706 1549 aa12.21□□□□□ -0.45
LMBR1L-215ENST00000550815 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
LMBR1L-215ENST00000550815 NPM1P06748 294 aaKnown RBP eCLIP12.18□□□□□ -0.46
LMBR1L-215ENST00000550815 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
LMBR1L-215ENST00000550815 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
LMBR1L-215ENST00000550815 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
LMBR1L-215ENST00000550815 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
LMBR1L-215ENST00000550815 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
LMBR1L-215ENST00000550815 MS4A3Q96HJ5 214 aa11.97□□□□□ -0.49
LMBR1L-215ENST00000550815 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
LMBR1L-215ENST00000550815 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 342.2 ms