RNA–Protein interactions for RNA: ENST00000550814.5

LETMD1-227, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-227ENST00000550814 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
LETMD1-227ENST00000550814 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
LETMD1-227ENST00000550814 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
LETMD1-227ENST00000550814 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
LETMD1-227ENST00000550814 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
LETMD1-227ENST00000550814 FOXD1Q16676 465 aa17.7■□□□□ 0.42
LETMD1-227ENST00000550814 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
LETMD1-227ENST00000550814 ADRA2BP18089 450 aa16.99■□□□□ 0.31
LETMD1-227ENST00000550814 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
LETMD1-227ENST00000550814 MSH5O43196 834 aa16.27■□□□□ 0.2
LETMD1-227ENST00000550814 PPP4R3CPQ6ZMV5 832 aa15.63■□□□□ 0.09
LETMD1-227ENST00000550814 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
LETMD1-227ENST00000550814 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
LETMD1-227ENST00000550814 KCNA4P22459 653 aa15.25■□□□□ 0.03
LETMD1-227ENST00000550814 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
LETMD1-227ENST00000550814 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
LETMD1-227ENST00000550814 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
LETMD1-227ENST00000550814 NPM3O75607 178 aaKnown RBP15.01□□□□□ -0.01
LETMD1-227ENST00000550814 POTEDQ86YR6 584 aa14.94□□□□□ -0.02
LETMD1-227ENST00000550814 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
LETMD1-227ENST00000550814 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
LETMD1-227ENST00000550814 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
LETMD1-227ENST00000550814 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
LETMD1-227ENST00000550814 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
LETMD1-227ENST00000550814 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
LETMD1-227ENST00000550814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.153e-14■□□□□ 10.9
LETMD1-227ENST00000550814 ZBTB22O15209 634 aa14.06□□□□□ -0.16
LETMD1-227ENST00000550814 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
LETMD1-227ENST00000550814 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
LETMD1-227ENST00000550814 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
LETMD1-227ENST00000550814 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
LETMD1-227ENST00000550814 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
LETMD1-227ENST00000550814 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
LETMD1-227ENST00000550814 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
LETMD1-227ENST00000550814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
LETMD1-227ENST00000550814 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
LETMD1-227ENST00000550814 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
LETMD1-227ENST00000550814 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
LETMD1-227ENST00000550814 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-227ENST00000550814 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
LETMD1-227ENST00000550814 APLP2Q06481 763 aa13.52□□□□□ -0.25
LETMD1-227ENST00000550814 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
LETMD1-227ENST00000550814 CAPN15O75808 1086 aa13.46□□□□□ -0.25
LETMD1-227ENST00000550814 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-227ENST00000550814 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
LETMD1-227ENST00000550814 DSG3P32926 999 aa13.3□□□□□ -0.28
LETMD1-227ENST00000550814 ABCB7O75027 752 aa13.23□□□□□ -0.29
LETMD1-227ENST00000550814 POLA2Q14181 598 aa13.19□□□□□ -0.3
LETMD1-227ENST00000550814 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
LETMD1-227ENST00000550814 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
LETMD1-227ENST00000550814 FBLN2P98095 1184 aa12.86□□□□□ -0.35
LETMD1-227ENST00000550814 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
LETMD1-227ENST00000550814 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
LETMD1-227ENST00000550814 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
LETMD1-227ENST00000550814 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
LETMD1-227ENST00000550814 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
LETMD1-227ENST00000550814 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
LETMD1-227ENST00000550814 FKBP8Q14318 412 aa12.55□□□□□ -0.4
LETMD1-227ENST00000550814 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
LETMD1-227ENST00000550814 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
LETMD1-227ENST00000550814 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
LETMD1-227ENST00000550814 PROM2Q8N271 834 aa12.41□□□□□ -0.42
LETMD1-227ENST00000550814 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
LETMD1-227ENST00000550814 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
LETMD1-227ENST00000550814 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
LETMD1-227ENST00000550814 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
LETMD1-227ENST00000550814 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
LETMD1-227ENST00000550814 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
LETMD1-227ENST00000550814 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
LETMD1-227ENST00000550814 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
LETMD1-227ENST00000550814 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
LETMD1-227ENST00000550814 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
LETMD1-227ENST00000550814 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
LETMD1-227ENST00000550814 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
LETMD1-227ENST00000550814 CREBZFQ9NS37 354 aa11.95□□□□□ -0.5
LETMD1-227ENST00000550814 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
LETMD1-227ENST00000550814 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
LETMD1-227ENST00000550814 MIER1Q8N108 512 aa11.89□□□□□ -0.51
LETMD1-227ENST00000550814 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
LETMD1-227ENST00000550814 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
LETMD1-227ENST00000550814 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
LETMD1-227ENST00000550814 POTEHQ6S545 545 aa11.8□□□□□ -0.52
LETMD1-227ENST00000550814 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
LETMD1-227ENST00000550814 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
LETMD1-227ENST00000550814 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
LETMD1-227ENST00000550814 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
LETMD1-227ENST00000550814 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
LETMD1-227ENST00000550814 NUBP1P53384 320 aa11.66□□□□□ -0.54
LETMD1-227ENST00000550814 SPOCK2Q92563 424 aa11.63□□□□□ -0.55
LETMD1-227ENST00000550814 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
LETMD1-227ENST00000550814 RASEFQ8IZ41 740 aa11.61□□□□□ -0.55
LETMD1-227ENST00000550814 HAX1O00165 279 aa11.57□□□□□ -0.56
LETMD1-227ENST00000550814 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
LETMD1-227ENST00000550814 EVX2Q03828 476 aa11.56□□□□□ -0.56
LETMD1-227ENST00000550814 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
LETMD1-227ENST00000550814 FAM212AQ96EL1 285 aa11.49□□□□□ -0.57
LETMD1-227ENST00000550814 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
LETMD1-227ENST00000550814 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
LETMD1-227ENST00000550814 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-227ENST00000550814 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms