RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
LETMD1-226ENST00000550755 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
LETMD1-226ENST00000550755 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
LETMD1-226ENST00000550755 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
LETMD1-226ENST00000550755 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
LETMD1-226ENST00000550755 FOXD1Q16676 465 aa23.46■■□□□ 1.35
LETMD1-226ENST00000550755 ADRA2BP18089 450 aa22.49■■□□□ 1.19
LETMD1-226ENST00000550755 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
LETMD1-226ENST00000550755 PIAS4Q8N2W9 510 aaPredicted RBP22.18■■□□□ 1.14
LETMD1-226ENST00000550755 MSH5O43196 834 aa21.78■■□□□ 1.08
LETMD1-226ENST00000550755 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
LETMD1-226ENST00000550755 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
LETMD1-226ENST00000550755 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
LETMD1-226ENST00000550755 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
LETMD1-226ENST00000550755 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
LETMD1-226ENST00000550755 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
LETMD1-226ENST00000550755 KCNA4P22459 653 aa20.09■□□□□ 0.81
LETMD1-226ENST00000550755 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
LETMD1-226ENST00000550755 NPM3O75607 178 aaKnown RBP19.82■□□□□ 0.76
LETMD1-226ENST00000550755 RNF216Q9NWF9 866 aaPredicted RBP19.81■□□□□ 0.76
LETMD1-226ENST00000550755 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
LETMD1-226ENST00000550755 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
LETMD1-226ENST00000550755 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
LETMD1-226ENST00000550755 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
LETMD1-226ENST00000550755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61
LETMD1-226ENST00000550755 SLC4A2P04920 1241 aa18.7■□□□□ 0.58
LETMD1-226ENST00000550755 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
LETMD1-226ENST00000550755 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
LETMD1-226ENST00000550755 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
LETMD1-226ENST00000550755 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
LETMD1-226ENST00000550755 ZBTB22O15209 634 aa18.42■□□□□ 0.54
LETMD1-226ENST00000550755 C1QBPQ07021 282 aaKnown RBP18.41■□□□□ 0.54
LETMD1-226ENST00000550755 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-226ENST00000550755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
LETMD1-226ENST00000550755 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
LETMD1-226ENST00000550755 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
LETMD1-226ENST00000550755 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-226ENST00000550755 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-226ENST00000550755 APLP2Q06481 763 aa18.22■□□□□ 0.51
LETMD1-226ENST00000550755 CAPN15O75808 1086 aa18.01■□□□□ 0.47
LETMD1-226ENST00000550755 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
LETMD1-226ENST00000550755 ATXN8OSP0DMR3 200 aa17.96■□□□□ 0.47
LETMD1-226ENST00000550755 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
LETMD1-226ENST00000550755 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
LETMD1-226ENST00000550755 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-226ENST00000550755 DSG3P32926 999 aa17.65■□□□□ 0.42
LETMD1-226ENST00000550755 ABCB7O75027 752 aa17.61■□□□□ 0.41
LETMD1-226ENST00000550755 POLA2Q14181 598 aa17.55■□□□□ 0.4
LETMD1-226ENST00000550755 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
LETMD1-226ENST00000550755 FBLN2P98095 1184 aa17.22■□□□□ 0.35
LETMD1-226ENST00000550755 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-226ENST00000550755 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
LETMD1-226ENST00000550755 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
LETMD1-226ENST00000550755 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
LETMD1-226ENST00000550755 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
LETMD1-226ENST00000550755 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
LETMD1-226ENST00000550755 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-226ENST00000550755 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
LETMD1-226ENST00000550755 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
LETMD1-226ENST00000550755 FKBP8Q14318 412 aa16.6■□□□□ 0.25
LETMD1-226ENST00000550755 SSUH2Q9Y2M2 353 aa16.6■□□□□ 0.25
LETMD1-226ENST00000550755 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
LETMD1-226ENST00000550755 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
LETMD1-226ENST00000550755 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
LETMD1-226ENST00000550755 PROM2Q8N271 834 aa16.31■□□□□ 0.2
LETMD1-226ENST00000550755 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
LETMD1-226ENST00000550755 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
LETMD1-226ENST00000550755 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
LETMD1-226ENST00000550755 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
LETMD1-226ENST00000550755 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
LETMD1-226ENST00000550755 FBXO3Q9UK99 471 aa16.12■□□□□ 0.17
LETMD1-226ENST00000550755 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
LETMD1-226ENST00000550755 PIP4P2Q8N4L2 257 aa15.95■□□□□ 0.14
LETMD1-226ENST00000550755 PLEKHG5O94827 1062 aa15.9■□□□□ 0.14
LETMD1-226ENST00000550755 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
LETMD1-226ENST00000550755 MIER1Q8N108 512 aa15.89■□□□□ 0.13
LETMD1-226ENST00000550755 PLCD3Q8N3E9 789 aa15.87■□□□□ 0.13
LETMD1-226ENST00000550755 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
LETMD1-226ENST00000550755 VASPP50552 380 aaPredicted RBP15.82■□□□□ 0.12
LETMD1-226ENST00000550755 CREBZFQ9NS37 354 aa15.81■□□□□ 0.12
LETMD1-226ENST00000550755 POTEHQ6S545 545 aa15.8■□□□□ 0.12
LETMD1-226ENST00000550755 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
LETMD1-226ENST00000550755 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
LETMD1-226ENST00000550755 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
LETMD1-226ENST00000550755 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
LETMD1-226ENST00000550755 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
LETMD1-226ENST00000550755 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
LETMD1-226ENST00000550755 HAX1O00165 279 aa15.54■□□□□ 0.08
LETMD1-226ENST00000550755 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
LETMD1-226ENST00000550755 SPOCK2Q92563 424 aa15.46■□□□□ 0.07
LETMD1-226ENST00000550755 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
LETMD1-226ENST00000550755 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
LETMD1-226ENST00000550755 NUBP1P53384 320 aa15.39■□□□□ 0.05
LETMD1-226ENST00000550755 FAM212AQ96EL1 285 aa15.37■□□□□ 0.05
LETMD1-226ENST00000550755 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
LETMD1-226ENST00000550755 RASEFQ8IZ41 740 aa15.35■□□□□ 0.05
LETMD1-226ENST00000550755 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
LETMD1-226ENST00000550755 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.04
LETMD1-226ENST00000550755 GSE1Q14687 1217 aa15.29■□□□□ 0.04
LETMD1-226ENST00000550755 CIZ1Q9ULV3 898 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms