RNA–Protein interactions for RNA: ENST00000550723.1

LINC02444-201, Transcript of long intergenic non-protein coding RNA 2444, humanhuman

TSL 1 (best) BASIC

Gene LINC02444, Length 1,256 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02444-201ENST00000550723 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
LINC02444-201ENST00000550723 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
LINC02444-201ENST00000550723 SENP3Q9H4L4 574 aaPredicted RBP26.26■■□□□ 1.79
LINC02444-201ENST00000550723 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
LINC02444-201ENST00000550723 FOXD1Q16676 465 aa24.55■■□□□ 1.52
LINC02444-201ENST00000550723 POTEDQ86YR6 584 aa23.39■■□□□ 1.33
LINC02444-201ENST00000550723 MSH5O43196 834 aa23.14■■□□□ 1.29
LINC02444-201ENST00000550723 PIAS4Q8N2W9 510 aaPredicted RBP22.82■■□□□ 1.24
LINC02444-201ENST00000550723 PLPPR3Q6T4P5 718 aa22.73■■□□□ 1.23
LINC02444-201ENST00000550723 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
LINC02444-201ENST00000550723 ADRA2BP18089 450 aa22.5■■□□□ 1.19
LINC02444-201ENST00000550723 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
LINC02444-201ENST00000550723 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
LINC02444-201ENST00000550723 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
LINC02444-201ENST00000550723 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
LINC02444-201ENST00000550723 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
LINC02444-201ENST00000550723 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
LINC02444-201ENST00000550723 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
LINC02444-201ENST00000550723 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
LINC02444-201ENST00000550723 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
LINC02444-201ENST00000550723 RNF216Q9NWF9 866 aaPredicted RBP19.54■□□□□ 0.72
LINC02444-201ENST00000550723 C1QBPQ07021 282 aaKnown RBP19.4■□□□□ 0.7
LINC02444-201ENST00000550723 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
LINC02444-201ENST00000550723 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
LINC02444-201ENST00000550723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
LINC02444-201ENST00000550723 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
LINC02444-201ENST00000550723 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
LINC02444-201ENST00000550723 CAPN15O75808 1086 aa18.31■□□□□ 0.52
LINC02444-201ENST00000550723 DSG3P32926 999 aa18.3■□□□□ 0.52
LINC02444-201ENST00000550723 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
LINC02444-201ENST00000550723 POTEHQ6S545 545 aa18.24■□□□□ 0.51
LINC02444-201ENST00000550723 SLC4A2P04920 1241 aa17.96■□□□□ 0.47
LINC02444-201ENST00000550723 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
LINC02444-201ENST00000550723 KCNA4P22459 653 aa17.9■□□□□ 0.46
LINC02444-201ENST00000550723 APLP2Q06481 763 aa17.86■□□□□ 0.45
LINC02444-201ENST00000550723 ABCB7O75027 752 aa17.84■□□□□ 0.45
LINC02444-201ENST00000550723 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
LINC02444-201ENST00000550723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
LINC02444-201ENST00000550723 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
LINC02444-201ENST00000550723 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
LINC02444-201ENST00000550723 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
LINC02444-201ENST00000550723 POLA2Q14181 598 aa17.33■□□□□ 0.36
LINC02444-201ENST00000550723 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
LINC02444-201ENST00000550723 CHRDL2Q6WN34 429 aa17.28■□□□□ 0.36
LINC02444-201ENST00000550723 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
LINC02444-201ENST00000550723 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
LINC02444-201ENST00000550723 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
LINC02444-201ENST00000550723 SP7Q8TDD2 431 aaPredicted RBP16.88■□□□□ 0.29
LINC02444-201ENST00000550723 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
LINC02444-201ENST00000550723 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
LINC02444-201ENST00000550723 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
LINC02444-201ENST00000550723 PIP4P2Q8N4L2 257 aa16.77■□□□□ 0.28
LINC02444-201ENST00000550723 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
LINC02444-201ENST00000550723 PITPNM1O00562 1244 aa16.64■□□□□ 0.25
LINC02444-201ENST00000550723 HAX1O00165 279 aa16.62■□□□□ 0.25
LINC02444-201ENST00000550723 FXR2P51116 673 aaKnown RBP eCLIP16.6■□□□□ 0.25
LINC02444-201ENST00000550723 ZBTB22O15209 634 aa16.44■□□□□ 0.22
LINC02444-201ENST00000550723 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
LINC02444-201ENST00000550723 EVX2Q03828 476 aa16.36■□□□□ 0.21
LINC02444-201ENST00000550723 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
LINC02444-201ENST00000550723 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
LINC02444-201ENST00000550723 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
LINC02444-201ENST00000550723 FBLN2P98095 1184 aa16.31■□□□□ 0.2
LINC02444-201ENST00000550723 PRKAR2AP13861 404 aaKnown RBP16.22■□□□□ 0.19
LINC02444-201ENST00000550723 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
LINC02444-201ENST00000550723 SPDYE1Q8NFV5 336 aaPredicted RBP16.19■□□□□ 0.18
LINC02444-201ENST00000550723 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
LINC02444-201ENST00000550723 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
LINC02444-201ENST00000550723 C19orf67A6NJJ6 358 aa16.08■□□□□ 0.16
LINC02444-201ENST00000550723 SSUH2Q9Y2M2 353 aa16.06■□□□□ 0.16
LINC02444-201ENST00000550723 GABBR2O75899 941 aa15.97■□□□□ 0.15
LINC02444-201ENST00000550723 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
LINC02444-201ENST00000550723 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
LINC02444-201ENST00000550723 LHX8Q68G74 356 aa15.84■□□□□ 0.13
LINC02444-201ENST00000550723 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
LINC02444-201ENST00000550723 CD44P16070 742 aaKnown RBP15.66■□□□□ 0.1
LINC02444-201ENST00000550723 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
LINC02444-201ENST00000550723 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
LINC02444-201ENST00000550723 CLCN6P51797 869 aa15.56■□□□□ 0.08
LINC02444-201ENST00000550723 DCBLD2Q96PD2 775 aa15.45■□□□□ 0.06
LINC02444-201ENST00000550723 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
LINC02444-201ENST00000550723 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
LINC02444-201ENST00000550723 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
LINC02444-201ENST00000550723 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
LINC02444-201ENST00000550723 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
LINC02444-201ENST00000550723 GALR2O43603 387 aaPredicted RBP15.25■□□□□ 0.03
LINC02444-201ENST00000550723 PLSCR2Q9NRY7 297 aa15.21■□□□□ 0.03
LINC02444-201ENST00000550723 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
LINC02444-201ENST00000550723 OTUD5Q96G74 571 aa15.14■□□□□ 0.01
LINC02444-201ENST00000550723 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
LINC02444-201ENST00000550723 PHF12Q96QT6 1004 aa15.11■□□□□ 0.01
LINC02444-201ENST00000550723 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
LINC02444-201ENST00000550723 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
LINC02444-201ENST00000550723 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
LINC02444-201ENST00000550723 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
LINC02444-201ENST00000550723 POTEMA6NI47 508 aa14.93□□□□□ -0.02
LINC02444-201ENST00000550723 ASTLQ6HA08 431 aaPredicted RBP14.89□□□□□ -0.03
LINC02444-201ENST00000550723 MS4A3Q96HJ5 214 aa14.89□□□□□ -0.03
LINC02444-201ENST00000550723 POTEGQ6S5H5 508 aa14.87□□□□□ -0.03
LINC02444-201ENST00000550723 METRNQ9UJH8 293 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms