RNA–Protein interactions for RNA: ENST00000550545.1

DNA2-207, Transcript of DNA replication helicase/nuclease 2, humanhuman

TSL 2

Gene DNA2, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNA2-207ENST00000550545 AEBP2Q6ZN18 517 aaPredicted RBP31.64■■■□□ 2.66
DNA2-207ENST00000550545 CHIC1Q5VXU3 224 aa30.23■■■□□ 2.43
DNA2-207ENST00000550545 SENP3Q9H4L4 574 aaPredicted RBP26.99■■□□□ 1.91
DNA2-207ENST00000550545 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
DNA2-207ENST00000550545 FOXD1Q16676 465 aa25.12■■□□□ 1.61
DNA2-207ENST00000550545 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
DNA2-207ENST00000550545 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
DNA2-207ENST00000550545 ADRA2BP18089 450 aa23.57■■□□□ 1.36
DNA2-207ENST00000550545 PIAS4Q8N2W9 510 aaPredicted RBP23.54■■□□□ 1.36
DNA2-207ENST00000550545 MSH5O43196 834 aa23.46■■□□□ 1.35
DNA2-207ENST00000550545 POTEDQ86YR6 584 aa22.58■■□□□ 1.21
DNA2-207ENST00000550545 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
DNA2-207ENST00000550545 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
DNA2-207ENST00000550545 DMRT2Q9Y5R5 561 aa21.42■■□□□ 1.02
DNA2-207ENST00000550545 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
DNA2-207ENST00000550545 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
DNA2-207ENST00000550545 HOXD11P31277 338 aaPredicted RBP20.7■□□□□ 0.9
DNA2-207ENST00000550545 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
DNA2-207ENST00000550545 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
DNA2-207ENST00000550545 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
DNA2-207ENST00000550545 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
DNA2-207ENST00000550545 CACNB1Q02641 598 aaPredicted RBP20.03■□□□□ 0.8
DNA2-207ENST00000550545 RNF39Q9H2S5 420 aa20.02■□□□□ 0.8
DNA2-207ENST00000550545 KCNA4P22459 653 aa19.98■□□□□ 0.79
DNA2-207ENST00000550545 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
DNA2-207ENST00000550545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.75
DNA2-207ENST00000550545 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
DNA2-207ENST00000550545 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
DNA2-207ENST00000550545 SLC4A2P04920 1241 aa19.24■□□□□ 0.67
DNA2-207ENST00000550545 SPINK5Q9NQ38 1064 aaPredicted RBP19.01■□□□□ 0.63
DNA2-207ENST00000550545 CAPN15O75808 1086 aa18.99■□□□□ 0.63
DNA2-207ENST00000550545 SLC4A1APQ9BWU0 796 aaKnown RBP18.92■□□□□ 0.62
DNA2-207ENST00000550545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
DNA2-207ENST00000550545 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
DNA2-207ENST00000550545 APLP2Q06481 763 aa18.86■□□□□ 0.61
DNA2-207ENST00000550545 DSG3P32926 999 aa18.81■□□□□ 0.6
DNA2-207ENST00000550545 SAMD1Q6SPF0 538 aaPredicted RBP18.77■□□□□ 0.6
DNA2-207ENST00000550545 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
DNA2-207ENST00000550545 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
DNA2-207ENST00000550545 ZNF219Q9P2Y4 722 aaPredicted RBP18.7■□□□□ 0.58
DNA2-207ENST00000550545 FOXD4L1Q9NU39 408 aa18.6■□□□□ 0.57
DNA2-207ENST00000550545 ABCB7O75027 752 aa18.56■□□□□ 0.56
DNA2-207ENST00000550545 ZBTB22O15209 634 aa18.36■□□□□ 0.53
DNA2-207ENST00000550545 POLA2Q14181 598 aa18.26■□□□□ 0.51
DNA2-207ENST00000550545 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
DNA2-207ENST00000550545 ATXN8OSP0DMR3 200 aa18.02■□□□□ 0.48
DNA2-207ENST00000550545 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
DNA2-207ENST00000550545 ZBTB12Q9Y330 459 aaPredicted RBP17.91■□□□□ 0.46
DNA2-207ENST00000550545 POTEHQ6S545 545 aa17.75■□□□□ 0.43
DNA2-207ENST00000550545 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
DNA2-207ENST00000550545 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
DNA2-207ENST00000550545 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
DNA2-207ENST00000550545 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
DNA2-207ENST00000550545 FBLN2P98095 1184 aa17.55■□□□□ 0.4
DNA2-207ENST00000550545 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
DNA2-207ENST00000550545 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
DNA2-207ENST00000550545 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
DNA2-207ENST00000550545 SPDYE2BA6NHP3 402 aa17.36■□□□□ 0.37
DNA2-207ENST00000550545 SPDYE6P0CI01 402 aa17.36■□□□□ 0.37
DNA2-207ENST00000550545 SPDYE2Q495Y8 402 aa17.36■□□□□ 0.37
DNA2-207ENST00000550545 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
DNA2-207ENST00000550545 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
DNA2-207ENST00000550545 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
DNA2-207ENST00000550545 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
DNA2-207ENST00000550545 FXR2P51116 673 aaKnown RBP eCLIP17.03■□□□□ 0.32
DNA2-207ENST00000550545 SPDYE1Q8NFV5 336 aaPredicted RBP17.02■□□□□ 0.32
DNA2-207ENST00000550545 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
DNA2-207ENST00000550545 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
DNA2-207ENST00000550545 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
DNA2-207ENST00000550545 HAX1O00165 279 aa16.77■□□□□ 0.28
DNA2-207ENST00000550545 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
DNA2-207ENST00000550545 SP7Q8TDD2 431 aaPredicted RBP16.72■□□□□ 0.27
DNA2-207ENST00000550545 SPDYE4A6NLX3 237 aa16.7■□□□□ 0.26
DNA2-207ENST00000550545 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
DNA2-207ENST00000550545 EVX2Q03828 476 aa16.54■□□□□ 0.24
DNA2-207ENST00000550545 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
DNA2-207ENST00000550545 C19orf67A6NJJ6 358 aa16.48■□□□□ 0.23
DNA2-207ENST00000550545 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
DNA2-207ENST00000550545 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
DNA2-207ENST00000550545 PROM2Q8N271 834 aa16.3■□□□□ 0.2
DNA2-207ENST00000550545 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
DNA2-207ENST00000550545 GABBR2O75899 941 aa16.2■□□□□ 0.18
DNA2-207ENST00000550545 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
DNA2-207ENST00000550545 NPM1P06748 294 aaKnown RBP eCLIP16.07■□□□□ 0.16
DNA2-207ENST00000550545 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
DNA2-207ENST00000550545 FKBP8Q14318 412 aa16.06■□□□□ 0.16
DNA2-207ENST00000550545 CLCN6P51797 869 aa16.02■□□□□ 0.16
DNA2-207ENST00000550545 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
DNA2-207ENST00000550545 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
DNA2-207ENST00000550545 MIER1Q8N108 512 aa15.94■□□□□ 0.14
DNA2-207ENST00000550545 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
DNA2-207ENST00000550545 PHF12Q96QT6 1004 aa15.84■□□□□ 0.13
DNA2-207ENST00000550545 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
DNA2-207ENST00000550545 PLCD3Q8N3E9 789 aa15.83■□□□□ 0.12
DNA2-207ENST00000550545 DCBLD2Q96PD2 775 aa15.83■□□□□ 0.12
DNA2-207ENST00000550545 GALR2O43603 387 aaPredicted RBP15.81■□□□□ 0.12
DNA2-207ENST00000550545 TSPYL2Q9H2G4 693 aaPredicted RBP15.78■□□□□ 0.12
DNA2-207ENST00000550545 ZBTB47Q9UFB7 747 aaPredicted RBP15.71■□□□□ 0.11
DNA2-207ENST00000550545 LHX8Q68G74 356 aa15.69■□□□□ 0.1
DNA2-207ENST00000550545 FBXO3Q9UK99 471 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms