RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
GNPTAB-207ENST00000550352 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
GNPTAB-207ENST00000550352 PHF23Q9BUL5 403 aaPredicted RBP22.06■■□□□ 1.12
GNPTAB-207ENST00000550352 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
GNPTAB-207ENST00000550352 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
GNPTAB-207ENST00000550352 FOXD1Q16676 465 aa20.08■□□□□ 0.81
GNPTAB-207ENST00000550352 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
GNPTAB-207ENST00000550352 ADRA2BP18089 450 aa19.42■□□□□ 0.7
GNPTAB-207ENST00000550352 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
GNPTAB-207ENST00000550352 MSH5O43196 834 aa18.42■□□□□ 0.54
GNPTAB-207ENST00000550352 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
GNPTAB-207ENST00000550352 KCNA4P22459 653 aa17.71■□□□□ 0.43
GNPTAB-207ENST00000550352 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
GNPTAB-207ENST00000550352 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
GNPTAB-207ENST00000550352 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
GNPTAB-207ENST00000550352 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
GNPTAB-207ENST00000550352 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
GNPTAB-207ENST00000550352 DMRT2Q9Y5R5 561 aa17.27■□□□□ 0.36
GNPTAB-207ENST00000550352 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
GNPTAB-207ENST00000550352 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
GNPTAB-207ENST00000550352 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
GNPTAB-207ENST00000550352 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
GNPTAB-207ENST00000550352 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
GNPTAB-207ENST00000550352 DCAF8L1A6NGE4 600 aa16.55■□□□□ 0.24
GNPTAB-207ENST00000550352 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
GNPTAB-207ENST00000550352 ZBTB22O15209 634 aa16.32■□□□□ 0.2
GNPTAB-207ENST00000550352 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
GNPTAB-207ENST00000550352 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
GNPTAB-207ENST00000550352 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
GNPTAB-207ENST00000550352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
GNPTAB-207ENST00000550352 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
GNPTAB-207ENST00000550352 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
GNPTAB-207ENST00000550352 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
GNPTAB-207ENST00000550352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
GNPTAB-207ENST00000550352 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
GNPTAB-207ENST00000550352 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
GNPTAB-207ENST00000550352 ATXN8OSP0DMR3 200 aa15.63■□□□□ 0.09
GNPTAB-207ENST00000550352 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
GNPTAB-207ENST00000550352 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
GNPTAB-207ENST00000550352 APLP2Q06481 763 aa15.52■□□□□ 0.08
GNPTAB-207ENST00000550352 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
GNPTAB-207ENST00000550352 CAPN15O75808 1086 aa15.39■□□□□ 0.05
GNPTAB-207ENST00000550352 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
GNPTAB-207ENST00000550352 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
GNPTAB-207ENST00000550352 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
GNPTAB-207ENST00000550352 ABCB7O75027 752 aa15.14■□□□□ 0.01
GNPTAB-207ENST00000550352 POLA2Q14181 598 aa15.13■□□□□ 0.01
GNPTAB-207ENST00000550352 DSG3P32926 999 aa15.1■□□□□ 0.01
GNPTAB-207ENST00000550352 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
GNPTAB-207ENST00000550352 FBLN2P98095 1184 aa14.84□□□□□ -0.03
GNPTAB-207ENST00000550352 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
GNPTAB-207ENST00000550352 FKBP8Q14318 412 aa14.72□□□□□ -0.05
GNPTAB-207ENST00000550352 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
GNPTAB-207ENST00000550352 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
GNPTAB-207ENST00000550352 SPDYE2BA6NHP3 402 aa14.45□□□□□ -0.1
GNPTAB-207ENST00000550352 SPDYE6P0CI01 402 aa14.45□□□□□ -0.1
GNPTAB-207ENST00000550352 SPDYE2Q495Y8 402 aa14.45□□□□□ -0.1
GNPTAB-207ENST00000550352 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
GNPTAB-207ENST00000550352 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
GNPTAB-207ENST00000550352 PROM2Q8N271 834 aa14.34□□□□□ -0.11
GNPTAB-207ENST00000550352 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
GNPTAB-207ENST00000550352 PABPN1Q86U42 306 aaKnown RBP eCLIP14.27□□□□□ -0.13
GNPTAB-207ENST00000550352 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
GNPTAB-207ENST00000550352 FBXO3Q9UK99 471 aa14.11□□□□□ -0.15
GNPTAB-207ENST00000550352 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
GNPTAB-207ENST00000550352 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
GNPTAB-207ENST00000550352 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
GNPTAB-207ENST00000550352 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
GNPTAB-207ENST00000550352 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
GNPTAB-207ENST00000550352 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
GNPTAB-207ENST00000550352 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
GNPTAB-207ENST00000550352 MIER1Q8N108 512 aa13.82□□□□□ -0.2
GNPTAB-207ENST00000550352 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
GNPTAB-207ENST00000550352 IFNLR1Q8IU57 520 aaPredicted RBP13.79□□□□□ -0.2
GNPTAB-207ENST00000550352 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
GNPTAB-207ENST00000550352 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
GNPTAB-207ENST00000550352 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
GNPTAB-207ENST00000550352 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
GNPTAB-207ENST00000550352 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
GNPTAB-207ENST00000550352 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
GNPTAB-207ENST00000550352 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
GNPTAB-207ENST00000550352 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
GNPTAB-207ENST00000550352 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
GNPTAB-207ENST00000550352 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
GNPTAB-207ENST00000550352 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
GNPTAB-207ENST00000550352 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
GNPTAB-207ENST00000550352 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
GNPTAB-207ENST00000550352 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
GNPTAB-207ENST00000550352 NUBP1P53384 320 aa13.46□□□□□ -0.25
GNPTAB-207ENST00000550352 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
GNPTAB-207ENST00000550352 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
GNPTAB-207ENST00000550352 PKD2Q13563 968 aa13.37□□□□□ -0.27
GNPTAB-207ENST00000550352 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
GNPTAB-207ENST00000550352 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
GNPTAB-207ENST00000550352 FAM212AQ96EL1 285 aa13.32□□□□□ -0.28
GNPTAB-207ENST00000550352 GSE1Q14687 1217 aa13.3□□□□□ -0.28
GNPTAB-207ENST00000550352 TSPYL2Q9H2G4 693 aaPredicted RBP13.28□□□□□ -0.28
GNPTAB-207ENST00000550352 ECM2O94769 699 aaPredicted RBP13.26□□□□□ -0.29
GNPTAB-207ENST00000550352 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
GNPTAB-207ENST00000550352 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms