RNA–Protein interactions for RNA: ENST00000550019.1

LINC02416-201, Transcript of long intergenic non-protein coding RNA 2416, humanhuman

TSL 4 BASIC

Gene LINC02416, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02416-201ENST00000550019 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
LINC02416-201ENST00000550019 CHIC1Q5VXU3 224 aa22.79■■□□□ 1.24
LINC02416-201ENST00000550019 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
LINC02416-201ENST00000550019 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
LINC02416-201ENST00000550019 FOXD1Q16676 465 aa18.98■□□□□ 0.63
LINC02416-201ENST00000550019 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
LINC02416-201ENST00000550019 MSH5O43196 834 aa17.87■□□□□ 0.45
LINC02416-201ENST00000550019 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
LINC02416-201ENST00000550019 ADRA2BP18089 450 aa17.74■□□□□ 0.43
LINC02416-201ENST00000550019 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
LINC02416-201ENST00000550019 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
LINC02416-201ENST00000550019 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
LINC02416-201ENST00000550019 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
LINC02416-201ENST00000550019 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
LINC02416-201ENST00000550019 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
LINC02416-201ENST00000550019 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
LINC02416-201ENST00000550019 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
LINC02416-201ENST00000550019 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
LINC02416-201ENST00000550019 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
LINC02416-201ENST00000550019 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
LINC02416-201ENST00000550019 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
LINC02416-201ENST00000550019 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
LINC02416-201ENST00000550019 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
LINC02416-201ENST00000550019 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
LINC02416-201ENST00000550019 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
LINC02416-201ENST00000550019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
LINC02416-201ENST00000550019 KCNA4P22459 653 aa14.92□□□□□ -0.02
LINC02416-201ENST00000550019 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
LINC02416-201ENST00000550019 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
LINC02416-201ENST00000550019 CAPN15O75808 1086 aa14.4□□□□□ -0.1
LINC02416-201ENST00000550019 APLP2Q06481 763 aa14.39□□□□□ -0.11
LINC02416-201ENST00000550019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
LINC02416-201ENST00000550019 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
LINC02416-201ENST00000550019 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
LINC02416-201ENST00000550019 SAMD1Q6SPF0 538 aaPredicted RBP14.23□□□□□ -0.13
LINC02416-201ENST00000550019 DSG3P32926 999 aa14.22□□□□□ -0.13
LINC02416-201ENST00000550019 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
LINC02416-201ENST00000550019 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
LINC02416-201ENST00000550019 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
LINC02416-201ENST00000550019 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
LINC02416-201ENST00000550019 ABCB7O75027 752 aa14.02□□□□□ -0.17
LINC02416-201ENST00000550019 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
LINC02416-201ENST00000550019 POLA2Q14181 598 aa13.79□□□□□ -0.2
LINC02416-201ENST00000550019 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
LINC02416-201ENST00000550019 ZBTB22O15209 634 aa13.65□□□□□ -0.22
LINC02416-201ENST00000550019 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
LINC02416-201ENST00000550019 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
LINC02416-201ENST00000550019 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
LINC02416-201ENST00000550019 POTEHQ6S545 545 aa13.54□□□□□ -0.24
LINC02416-201ENST00000550019 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
LINC02416-201ENST00000550019 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
LINC02416-201ENST00000550019 FBLN2P98095 1184 aa13.31□□□□□ -0.28
LINC02416-201ENST00000550019 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
LINC02416-201ENST00000550019 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
LINC02416-201ENST00000550019 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
LINC02416-201ENST00000550019 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
LINC02416-201ENST00000550019 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
LINC02416-201ENST00000550019 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
LINC02416-201ENST00000550019 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
LINC02416-201ENST00000550019 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
LINC02416-201ENST00000550019 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
LINC02416-201ENST00000550019 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
LINC02416-201ENST00000550019 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC02416-201ENST00000550019 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
LINC02416-201ENST00000550019 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC02416-201ENST00000550019 HAX1O00165 279 aa12.77□□□□□ -0.37
LINC02416-201ENST00000550019 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
LINC02416-201ENST00000550019 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
LINC02416-201ENST00000550019 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
LINC02416-201ENST00000550019 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
LINC02416-201ENST00000550019 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
LINC02416-201ENST00000550019 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
LINC02416-201ENST00000550019 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
LINC02416-201ENST00000550019 EVX2Q03828 476 aa12.46□□□□□ -0.41
LINC02416-201ENST00000550019 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
LINC02416-201ENST00000550019 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
LINC02416-201ENST00000550019 GABBR2O75899 941 aa12.29□□□□□ -0.44
LINC02416-201ENST00000550019 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
LINC02416-201ENST00000550019 CLCN6P51797 869 aa12.25□□□□□ -0.45
LINC02416-201ENST00000550019 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC02416-201ENST00000550019 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
LINC02416-201ENST00000550019 PROM2Q8N271 834 aa12.18□□□□□ -0.46
LINC02416-201ENST00000550019 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
LINC02416-201ENST00000550019 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
LINC02416-201ENST00000550019 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
LINC02416-201ENST00000550019 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
LINC02416-201ENST00000550019 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
LINC02416-201ENST00000550019 MIER1Q8N108 512 aa12.02□□□□□ -0.49
LINC02416-201ENST00000550019 FKBP8Q14318 412 aa11.99□□□□□ -0.49
LINC02416-201ENST00000550019 LHX8Q68G74 356 aa11.96□□□□□ -0.49
LINC02416-201ENST00000550019 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
LINC02416-201ENST00000550019 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
LINC02416-201ENST00000550019 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
LINC02416-201ENST00000550019 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
LINC02416-201ENST00000550019 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
LINC02416-201ENST00000550019 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
LINC02416-201ENST00000550019 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms