RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
RAB5B-207ENST00000549915 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
RAB5B-207ENST00000549915 SENP3Q9H4L4 574 aaPredicted RBP12.04□□□□□ -0.48
RAB5B-207ENST00000549915 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
RAB5B-207ENST00000549915 PLPPR3Q6T4P5 718 aa11.06□□□□□ -0.64
RAB5B-207ENST00000549915 FOXD1Q16676 465 aa11.04□□□□□ -0.64
RAB5B-207ENST00000549915 PIAS4Q8N2W9 510 aaPredicted RBP10.45□□□□□ -0.74
RAB5B-207ENST00000549915 ADRA2BP18089 450 aa10.44□□□□□ -0.74
RAB5B-207ENST00000549915 PPP6R1Q9UPN7 881 aa10.43□□□□□ -0.74
RAB5B-207ENST00000549915 MSH5O43196 834 aa10.42□□□□□ -0.74
RAB5B-207ENST00000549915 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
RAB5B-207ENST00000549915 PPP4R3CPQ6ZMV5 832 aa9.65□□□□□ -0.86
RAB5B-207ENST00000549915 POTEDQ86YR6 584 aa9.56□□□□□ -0.88
RAB5B-207ENST00000549915 DMRT2Q9Y5R5 561 aa9.54□□□□□ -0.88
RAB5B-207ENST00000549915 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
RAB5B-207ENST00000549915 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
RAB5B-207ENST00000549915 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
RAB5B-207ENST00000549915 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-207ENST00000549915 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-207ENST00000549915 NPM3O75607 178 aaKnown RBP9.19□□□□□ -0.94
RAB5B-207ENST00000549915 KCNA4P22459 653 aa9.19□□□□□ -0.94
RAB5B-207ENST00000549915 DCAF8L1A6NGE4 600 aa9.1□□□□□ -0.95
RAB5B-207ENST00000549915 DNAJC5BQ9UF47 199 aa9.1□□□□□ -0.95
RAB5B-207ENST00000549915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.87□□□□□ -0.99
RAB5B-207ENST00000549915 SLC4A1APQ9BWU0 796 aaKnown RBP8.82□□□□□ -1
RAB5B-207ENST00000549915 RNF39Q9H2S5 420 aa8.81□□□□□ -1
RAB5B-207ENST00000549915 C1QBPQ07021 282 aaKnown RBP8.79□□□□□ -1
RAB5B-207ENST00000549915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
RAB5B-207ENST00000549915 CACNB1Q02641 598 aaPredicted RBP8.7□□□□□ -1.02
RAB5B-207ENST00000549915 APLP2Q06481 763 aa8.7□□□□□ -1.02
RAB5B-207ENST00000549915 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
RAB5B-207ENST00000549915 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
RAB5B-207ENST00000549915 U3KPZ7 1027 aaPredicted RBP8.63□□□□□ -1.03
RAB5B-207ENST00000549915 FOXD4L1Q9NU39 408 aa8.62□□□□□ -1.03
RAB5B-207ENST00000549915 MYCNP04198 464 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-207ENST00000549915 SAMD1Q6SPF0 538 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-207ENST00000549915 ZNF219Q9P2Y4 722 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-207ENST00000549915 CAPN15O75808 1086 aa8.45□□□□□ -1.06
RAB5B-207ENST00000549915 ATXN8OSP0DMR3 200 aa8.41□□□□□ -1.06
RAB5B-207ENST00000549915 ZBTB22O15209 634 aa8.4□□□□□ -1.06
RAB5B-207ENST00000549915 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-207ENST00000549915 TRHP20396 242 aaPredicted RBP8.35□□□□□ -1.07
RAB5B-207ENST00000549915 EHMT2Q96KQ7 1210 aa8.33□□□□□ -1.08
RAB5B-207ENST00000549915 DSG3P32926 999 aa8.31□□□□□ -1.08
RAB5B-207ENST00000549915 CSRNP3Q8WYN3 585 aa8.29□□□□□ -1.08
RAB5B-207ENST00000549915 ZBTB12Q9Y330 459 aaPredicted RBP8.25□□□□□ -1.09
RAB5B-207ENST00000549915 ABCB7O75027 752 aa8.2□□□□□ -1.1
RAB5B-207ENST00000549915 POLA2Q14181 598 aa8.19□□□□□ -1.1
RAB5B-207ENST00000549915 ATF5Q9Y2D1 282 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-207ENST00000549915 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
RAB5B-207ENST00000549915 FBLN2P98095 1184 aa8.09□□□□□ -1.11
RAB5B-207ENST00000549915 SPDYE2BA6NHP3 402 aa7.93□□□□□ -1.14
RAB5B-207ENST00000549915 SPDYE6P0CI01 402 aa7.93□□□□□ -1.14
RAB5B-207ENST00000549915 SPDYE2Q495Y8 402 aa7.93□□□□□ -1.14
RAB5B-207ENST00000549915 OSCARQ8IYS5 282 aa7.9□□□□□ -1.14
RAB5B-207ENST00000549915 AKT1S1Q96B36 256 aa7.9□□□□□ -1.14
RAB5B-207ENST00000549915 MKRN4PQ13434 485 aaPredicted RBP7.85□□□□□ -1.15
RAB5B-207ENST00000549915 ZNF692Q9BU19 519 aaPredicted RBP7.81□□□□□ -1.16
RAB5B-207ENST00000549915 SSUH2Q9Y2M2 353 aa7.79□□□□□ -1.16
RAB5B-207ENST00000549915 REM2Q8IYK8 340 aaPredicted RBP7.74□□□□□ -1.17
RAB5B-207ENST00000549915 SPDYE1Q8NFV5 336 aaPredicted RBP7.73□□□□□ -1.17
RAB5B-207ENST00000549915 SPDYE4A6NLX3 237 aa7.72□□□□□ -1.17
RAB5B-207ENST00000549915 CHRDL2Q6WN34 429 aa7.69□□□□□ -1.18
RAB5B-207ENST00000549915 PABPN1Q86U42 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
RAB5B-207ENST00000549915 STAG3Q9UJ98 1225 aa7.67□□□□□ -1.18
RAB5B-207ENST00000549915 PITPNM1O00562 1244 aa7.64□□□□□ -1.19
RAB5B-207ENST00000549915 CLEC11AQ9Y240 323 aa7.6□□□□□ -1.19
RAB5B-207ENST00000549915 POTEHQ6S545 545 aa7.59□□□□□ -1.19
RAB5B-207ENST00000549915 PROM2Q8N271 834 aa7.58□□□□□ -1.2
RAB5B-207ENST00000549915 PRR29P0C7W0 189 aa7.56□□□□□ -1.2
RAB5B-207ENST00000549915 FXR2P51116 673 aaKnown RBP eCLIP7.55□□□□□ -1.2
RAB5B-207ENST00000549915 FKBP8Q14318 412 aa7.55□□□□□ -1.2
RAB5B-207ENST00000549915 PIP4P2Q8N4L2 257 aa7.52□□□□□ -1.21
RAB5B-207ENST00000549915 FBXO3Q9UK99 471 aa7.5□□□□□ -1.21
RAB5B-207ENST00000549915 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
RAB5B-207ENST00000549915 PRKAR2AP13861 404 aaKnown RBP7.47□□□□□ -1.21
RAB5B-207ENST00000549915 ZBTB47Q9UFB7 747 aaPredicted RBP7.41□□□□□ -1.22
RAB5B-207ENST00000549915 NPM1P06748 294 aaKnown RBP eCLIP7.39□□□□□ -1.23
RAB5B-207ENST00000549915 CREBZFQ9NS37 354 aa7.36□□□□□ -1.23
RAB5B-207ENST00000549915 FARP1Q9Y4F1 1045 aaPredicted RBP7.36□□□□□ -1.23
RAB5B-207ENST00000549915 PLCD3Q8N3E9 789 aa7.35□□□□□ -1.23
RAB5B-207ENST00000549915 HAX1O00165 279 aa7.34□□□□□ -1.23
RAB5B-207ENST00000549915 CHADLQ6NUI6 762 aa7.34□□□□□ -1.23
RAB5B-207ENST00000549915 MIER1Q8N108 512 aa7.34□□□□□ -1.23
RAB5B-207ENST00000549915 PAK3O75914 559 aaPredicted RBP7.33□□□□□ -1.24
RAB5B-207ENST00000549915 CLCN6P51797 869 aa7.32□□□□□ -1.24
RAB5B-207ENST00000549915 C19orf67A6NJJ6 358 aa7.3□□□□□ -1.24
RAB5B-207ENST00000549915 VASPP50552 380 aaPredicted RBP7.28□□□□□ -1.24
RAB5B-207ENST00000549915 CD44P16070 742 aaKnown RBP7.26□□□□□ -1.25
RAB5B-207ENST00000549915 SP7Q8TDD2 431 aaPredicted RBP7.26□□□□□ -1.25
RAB5B-207ENST00000549915 MNX1P50219 401 aaPredicted RBP7.25□□□□□ -1.25
RAB5B-207ENST00000549915 NISCHQ9Y2I1 1504 aa7.24□□□□□ -1.25
RAB5B-207ENST00000549915 KLHL34Q8N239 644 aa7.2□□□□□ -1.26
RAB5B-207ENST00000549915 ZNF579Q8NAF0 562 aaKnown RBP7.2□□□□□ -1.26
RAB5B-207ENST00000549915 FAM212AQ96EL1 285 aa7.19□□□□□ -1.26
RAB5B-207ENST00000549915 ZRANB1Q9UGI0 708 aa7.19□□□□□ -1.26
RAB5B-207ENST00000549915 GSE1Q14687 1217 aa7.14□□□□□ -1.27
RAB5B-207ENST00000549915 SPOCK2Q92563 424 aa7.14□□□□□ -1.27
RAB5B-207ENST00000549915 NUBP1P53384 320 aa7.12□□□□□ -1.27
RAB5B-207ENST00000549915 EVX2Q03828 476 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms