RNA–Protein interactions for RNA: ENST00000549896.1

AC013417.1-201, humanhuman

TSL 5 BASIC

Gene AC013417.1, Length 271 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013417.1-201ENST00000549896 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
AC013417.1-201ENST00000549896 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
AC013417.1-201ENST00000549896 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
AC013417.1-201ENST00000549896 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
AC013417.1-201ENST00000549896 FOXD1Q16676 465 aa22.26■■□□□ 1.15
AC013417.1-201ENST00000549896 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
AC013417.1-201ENST00000549896 ADRA2BP18089 450 aa20.99■□□□□ 0.95
AC013417.1-201ENST00000549896 PPP6R1Q9UPN7 881 aa20.99■□□□□ 0.95
AC013417.1-201ENST00000549896 PIAS4Q8N2W9 510 aaPredicted RBP20.96■□□□□ 0.95
AC013417.1-201ENST00000549896 MSH5O43196 834 aa20.87■□□□□ 0.93
AC013417.1-201ENST00000549896 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
AC013417.1-201ENST00000549896 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
AC013417.1-201ENST00000549896 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
AC013417.1-201ENST00000549896 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
AC013417.1-201ENST00000549896 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
AC013417.1-201ENST00000549896 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
AC013417.1-201ENST00000549896 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
AC013417.1-201ENST00000549896 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
AC013417.1-201ENST00000549896 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
AC013417.1-201ENST00000549896 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
AC013417.1-201ENST00000549896 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
AC013417.1-201ENST00000549896 KCNA4P22459 653 aa18.12■□□□□ 0.49
AC013417.1-201ENST00000549896 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
AC013417.1-201ENST00000549896 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
AC013417.1-201ENST00000549896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
AC013417.1-201ENST00000549896 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
AC013417.1-201ENST00000549896 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
AC013417.1-201ENST00000549896 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
AC013417.1-201ENST00000549896 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
AC013417.1-201ENST00000549896 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
AC013417.1-201ENST00000549896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
AC013417.1-201ENST00000549896 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
AC013417.1-201ENST00000549896 APLP2Q06481 763 aa17.1■□□□□ 0.33
AC013417.1-201ENST00000549896 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
AC013417.1-201ENST00000549896 CAPN15O75808 1086 aa16.95■□□□□ 0.3
AC013417.1-201ENST00000549896 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
AC013417.1-201ENST00000549896 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
AC013417.1-201ENST00000549896 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
AC013417.1-201ENST00000549896 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
AC013417.1-201ENST00000549896 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
AC013417.1-201ENST00000549896 DSG3P32926 999 aa16.71■□□□□ 0.27
AC013417.1-201ENST00000549896 ZBTB22O15209 634 aa16.59■□□□□ 0.25
AC013417.1-201ENST00000549896 ABCB7O75027 752 aa16.5■□□□□ 0.23
AC013417.1-201ENST00000549896 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
AC013417.1-201ENST00000549896 POLA2Q14181 598 aa16.34■□□□□ 0.21
AC013417.1-201ENST00000549896 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
AC013417.1-201ENST00000549896 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
AC013417.1-201ENST00000549896 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
AC013417.1-201ENST00000549896 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
AC013417.1-201ENST00000549896 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
AC013417.1-201ENST00000549896 FBLN2P98095 1184 aa15.93■□□□□ 0.14
AC013417.1-201ENST00000549896 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
AC013417.1-201ENST00000549896 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
AC013417.1-201ENST00000549896 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
AC013417.1-201ENST00000549896 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
AC013417.1-201ENST00000549896 SPDYE2Q495Y8 402 aa15.67■□□□□ 0.1
AC013417.1-201ENST00000549896 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
AC013417.1-201ENST00000549896 REM2Q8IYK8 340 aaPredicted RBP15.52■□□□□ 0.08
AC013417.1-201ENST00000549896 POTEHQ6S545 545 aa15.51■□□□□ 0.07
AC013417.1-201ENST00000549896 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
AC013417.1-201ENST00000549896 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
AC013417.1-201ENST00000549896 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
AC013417.1-201ENST00000549896 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
AC013417.1-201ENST00000549896 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
AC013417.1-201ENST00000549896 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
AC013417.1-201ENST00000549896 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
AC013417.1-201ENST00000549896 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
AC013417.1-201ENST00000549896 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
AC013417.1-201ENST00000549896 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
AC013417.1-201ENST00000549896 PRR29P0C7W0 189 aa15.05■□□□□ -0
AC013417.1-201ENST00000549896 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
AC013417.1-201ENST00000549896 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
AC013417.1-201ENST00000549896 HAX1O00165 279 aa14.86□□□□□ -0.03
AC013417.1-201ENST00000549896 PROM2Q8N271 834 aa14.82□□□□□ -0.04
AC013417.1-201ENST00000549896 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
AC013417.1-201ENST00000549896 FKBP8Q14318 412 aa14.74□□□□□ -0.05
AC013417.1-201ENST00000549896 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
AC013417.1-201ENST00000549896 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
AC013417.1-201ENST00000549896 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
AC013417.1-201ENST00000549896 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
AC013417.1-201ENST00000549896 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
AC013417.1-201ENST00000549896 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
AC013417.1-201ENST00000549896 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
AC013417.1-201ENST00000549896 EVX2Q03828 476 aa14.51□□□□□ -0.09
AC013417.1-201ENST00000549896 FBXO3Q9UK99 471 aa14.49□□□□□ -0.09
AC013417.1-201ENST00000549896 PAK3O75914 559 aaPredicted RBP14.47□□□□□ -0.09
AC013417.1-201ENST00000549896 MIER1Q8N108 512 aa14.47□□□□□ -0.09
AC013417.1-201ENST00000549896 CLCN6P51797 869 aa14.45□□□□□ -0.1
AC013417.1-201ENST00000549896 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
AC013417.1-201ENST00000549896 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
AC013417.1-201ENST00000549896 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
AC013417.1-201ENST00000549896 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
AC013417.1-201ENST00000549896 GABBR2O75899 941 aa14.34□□□□□ -0.11
AC013417.1-201ENST00000549896 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
AC013417.1-201ENST00000549896 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
AC013417.1-201ENST00000549896 TSPYL2Q9H2G4 693 aaPredicted RBP14.18□□□□□ -0.14
AC013417.1-201ENST00000549896 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
AC013417.1-201ENST00000549896 DCBLD2Q96PD2 775 aa14.12□□□□□ -0.15
AC013417.1-201ENST00000549896 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
AC013417.1-201ENST00000549896 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms