RNA–Protein interactions for RNA: ENST00000549896.1

AC013417.1-201, humanhuman

TSL 5 BASIC

Gene AC013417.1, Length 271 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013417.1-201ENST00000549896 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
AC013417.1-201ENST00000549896 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
AC013417.1-201ENST00000549896 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
AC013417.1-201ENST00000549896 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
AC013417.1-201ENST00000549896 FOXD1Q16676 465 aa22.26■■□□□ 1.15
AC013417.1-201ENST00000549896 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
AC013417.1-201ENST00000549896 ADRA2BP18089 450 aa20.99■□□□□ 0.95
AC013417.1-201ENST00000549896 PPP6R1Q9UPN7 881 aa20.99■□□□□ 0.95
AC013417.1-201ENST00000549896 PIAS4Q8N2W9 510 aaPredicted RBP20.96■□□□□ 0.95
AC013417.1-201ENST00000549896 MSH5O43196 834 aa20.87■□□□□ 0.93
AC013417.1-201ENST00000549896 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
AC013417.1-201ENST00000549896 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
AC013417.1-201ENST00000549896 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
AC013417.1-201ENST00000549896 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
AC013417.1-201ENST00000549896 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
AC013417.1-201ENST00000549896 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
AC013417.1-201ENST00000549896 NCBP3Q53F19 620 aaKnown RBP18.67■□□□□ 0.58
AC013417.1-201ENST00000549896 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
AC013417.1-201ENST00000549896 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
AC013417.1-201ENST00000549896 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
AC013417.1-201ENST00000549896 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
AC013417.1-201ENST00000549896 KCNA4P22459 653 aa18.12■□□□□ 0.49
AC013417.1-201ENST00000549896 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
AC013417.1-201ENST00000549896 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
AC013417.1-201ENST00000549896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
AC013417.1-201ENST00000549896 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
AC013417.1-201ENST00000549896 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
AC013417.1-201ENST00000549896 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
AC013417.1-201ENST00000549896 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
AC013417.1-201ENST00000549896 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
AC013417.1-201ENST00000549896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
AC013417.1-201ENST00000549896 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
AC013417.1-201ENST00000549896 APLP2Q06481 763 aa17.1■□□□□ 0.33
AC013417.1-201ENST00000549896 SAMD1Q6SPF0 538 aaPredicted RBP16.98■□□□□ 0.31
AC013417.1-201ENST00000549896 CAPN15O75808 1086 aa16.95■□□□□ 0.3
AC013417.1-201ENST00000549896 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
AC013417.1-201ENST00000549896 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
AC013417.1-201ENST00000549896 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
AC013417.1-201ENST00000549896 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
AC013417.1-201ENST00000549896 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
AC013417.1-201ENST00000549896 DSG3P32926 999 aa16.71■□□□□ 0.27
AC013417.1-201ENST00000549896 ZBTB22O15209 634 aa16.59■□□□□ 0.25
AC013417.1-201ENST00000549896 ABCB7O75027 752 aa16.5■□□□□ 0.23
AC013417.1-201ENST00000549896 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
AC013417.1-201ENST00000549896 POLA2Q14181 598 aa16.34■□□□□ 0.21
AC013417.1-201ENST00000549896 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
AC013417.1-201ENST00000549896 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
AC013417.1-201ENST00000549896 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
AC013417.1-201ENST00000549896 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
AC013417.1-201ENST00000549896 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
AC013417.1-201ENST00000549896 FBLN2P98095 1184 aa15.93■□□□□ 0.14
AC013417.1-201ENST00000549896 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
AC013417.1-201ENST00000549896 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
AC013417.1-201ENST00000549896 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
AC013417.1-201ENST00000549896 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
AC013417.1-201ENST00000549896 SPDYE2Q495Y8 402 aa15.67■□□□□ 0.1
AC013417.1-201ENST00000549896 MKRN4PQ13434 485 aaPredicted RBP15.62■□□□□ 0.09
AC013417.1-201ENST00000549896 REM2Q8IYK8 340 aaPredicted RBP15.52■□□□□ 0.08
AC013417.1-201ENST00000549896 POTEHQ6S545 545 aa15.51■□□□□ 0.07
AC013417.1-201ENST00000549896 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
AC013417.1-201ENST00000549896 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
AC013417.1-201ENST00000549896 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
AC013417.1-201ENST00000549896 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
AC013417.1-201ENST00000549896 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
AC013417.1-201ENST00000549896 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
AC013417.1-201ENST00000549896 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
AC013417.1-201ENST00000549896 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
AC013417.1-201ENST00000549896 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
AC013417.1-201ENST00000549896 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
AC013417.1-201ENST00000549896 PRR29P0C7W0 189 aa15.05■□□□□ -0
AC013417.1-201ENST00000549896 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
AC013417.1-201ENST00000549896 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
AC013417.1-201ENST00000549896 HAX1O00165 279 aa14.86□□□□□ -0.03
AC013417.1-201ENST00000549896 PROM2Q8N271 834 aa14.82□□□□□ -0.04
AC013417.1-201ENST00000549896 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
AC013417.1-201ENST00000549896 FKBP8Q14318 412 aa14.74□□□□□ -0.05
AC013417.1-201ENST00000549896 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
AC013417.1-201ENST00000549896 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
AC013417.1-201ENST00000549896 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
AC013417.1-201ENST00000549896 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
AC013417.1-201ENST00000549896 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
AC013417.1-201ENST00000549896 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
AC013417.1-201ENST00000549896 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
AC013417.1-201ENST00000549896 EVX2Q03828 476 aa14.51□□□□□ -0.09
AC013417.1-201ENST00000549896 FBXO3Q9UK99 471 aa14.49□□□□□ -0.09
AC013417.1-201ENST00000549896 PAK3O75914 559 aaPredicted RBP14.47□□□□□ -0.09
AC013417.1-201ENST00000549896 MIER1Q8N108 512 aa14.47□□□□□ -0.09
AC013417.1-201ENST00000549896 CLCN6P51797 869 aa14.45□□□□□ -0.1
AC013417.1-201ENST00000549896 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
AC013417.1-201ENST00000549896 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
AC013417.1-201ENST00000549896 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
AC013417.1-201ENST00000549896 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
AC013417.1-201ENST00000549896 GABBR2O75899 941 aa14.34□□□□□ -0.11
AC013417.1-201ENST00000549896 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
AC013417.1-201ENST00000549896 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
AC013417.1-201ENST00000549896 TSPYL2Q9H2G4 693 aaPredicted RBP14.18□□□□□ -0.14
AC013417.1-201ENST00000549896 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
AC013417.1-201ENST00000549896 DCBLD2Q96PD2 775 aa14.12□□□□□ -0.15
AC013417.1-201ENST00000549896 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
AC013417.1-201ENST00000549896 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms