RNA–Protein interactions for RNA: ENST00000549660.1

AC087311.2-201, humanhuman

TSL 4 BASIC

Gene AC087311.2, Length 320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087311.2-201ENST00000549660 AEBP2Q6ZN18 517 aaPredicted RBP17.86■□□□□ 0.45
AC087311.2-201ENST00000549660 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
AC087311.2-201ENST00000549660 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
AC087311.2-201ENST00000549660 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
AC087311.2-201ENST00000549660 PLPPR3Q6T4P5 718 aa14.53□□□□□ -0.08
AC087311.2-201ENST00000549660 FOXD1Q16676 465 aa13.95□□□□□ -0.18
AC087311.2-201ENST00000549660 ADRA2BP18089 450 aa13.76□□□□□ -0.21
AC087311.2-201ENST00000549660 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
AC087311.2-201ENST00000549660 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
AC087311.2-201ENST00000549660 KCNA4P22459 653 aa13.05□□□□□ -0.32
AC087311.2-201ENST00000549660 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
AC087311.2-201ENST00000549660 MSH5O43196 834 aa12.63□□□□□ -0.39
AC087311.2-201ENST00000549660 NCBP3Q53F19 620 aaKnown RBP12.61□□□□□ -0.39
AC087311.2-201ENST00000549660 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
AC087311.2-201ENST00000549660 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
AC087311.2-201ENST00000549660 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
AC087311.2-201ENST00000549660 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
AC087311.2-201ENST00000549660 CNKSR2Q8WXI2 1034 aa12.42□□□□□ -0.42
AC087311.2-201ENST00000549660 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
AC087311.2-201ENST00000549660 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
AC087311.2-201ENST00000549660 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
AC087311.2-201ENST00000549660 DMRT2Q9Y5R5 561 aa12.06□□□□□ -0.48
AC087311.2-201ENST00000549660 ZBTB22O15209 634 aa12.03□□□□□ -0.48
AC087311.2-201ENST00000549660 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
AC087311.2-201ENST00000549660 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
AC087311.2-201ENST00000549660 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
AC087311.2-201ENST00000549660 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
AC087311.2-201ENST00000549660 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
AC087311.2-201ENST00000549660 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
AC087311.2-201ENST00000549660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
AC087311.2-201ENST00000549660 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
AC087311.2-201ENST00000549660 U3KPZ7 1027 aaPredicted RBP11.28□□□□□ -0.6
AC087311.2-201ENST00000549660 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
AC087311.2-201ENST00000549660 SAMD1Q6SPF0 538 aaPredicted RBP11.17□□□□□ -0.62
AC087311.2-201ENST00000549660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
AC087311.2-201ENST00000549660 HNRNPUL2Q1KMD3 747 aaKnown RBP11.16□□□□□ -0.62
AC087311.2-201ENST00000549660 FKBP8Q14318 412 aa11.03□□□□□ -0.64
AC087311.2-201ENST00000549660 ZNF219Q9P2Y4 722 aaPredicted RBP10.97□□□□□ -0.65
AC087311.2-201ENST00000549660 APLP2Q06481 763 aa10.93□□□□□ -0.66
AC087311.2-201ENST00000549660 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
AC087311.2-201ENST00000549660 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
AC087311.2-201ENST00000549660 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
AC087311.2-201ENST00000549660 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
AC087311.2-201ENST00000549660 CAPN15O75808 1086 aa10.78□□□□□ -0.68
AC087311.2-201ENST00000549660 C1QBPQ07021 282 aaKnown RBP10.76□□□□□ -0.69
AC087311.2-201ENST00000549660 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
AC087311.2-201ENST00000549660 POLA2Q14181 598 aa10.74□□□□□ -0.69
AC087311.2-201ENST00000549660 RTN4Q9NQC3 1192 aaKnown RBP10.71□□□□□ -0.69
AC087311.2-201ENST00000549660 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
AC087311.2-201ENST00000549660 FBLN2P98095 1184 aa10.65□□□□□ -0.7
AC087311.2-201ENST00000549660 ABCB7O75027 752 aa10.64□□□□□ -0.71
AC087311.2-201ENST00000549660 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
AC087311.2-201ENST00000549660 DSG3P32926 999 aa10.52□□□□□ -0.73
AC087311.2-201ENST00000549660 PROM2Q8N271 834 aa10.51□□□□□ -0.73
AC087311.2-201ENST00000549660 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
AC087311.2-201ENST00000549660 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
AC087311.2-201ENST00000549660 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
AC087311.2-201ENST00000549660 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
AC087311.2-201ENST00000549660 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
AC087311.2-201ENST00000549660 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
AC087311.2-201ENST00000549660 IFNLR1Q8IU57 520 aaPredicted RBP10.29□□□□□ -0.76
AC087311.2-201ENST00000549660 SPDYE2BA6NHP3 402 aa10.28□□□□□ -0.76
AC087311.2-201ENST00000549660 SPDYE6P0CI01 402 aa10.28□□□□□ -0.76
AC087311.2-201ENST00000549660 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
AC087311.2-201ENST00000549660 SSUH2Q9Y2M2 353 aa10.26□□□□□ -0.77
AC087311.2-201ENST00000549660 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
AC087311.2-201ENST00000549660 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
AC087311.2-201ENST00000549660 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
AC087311.2-201ENST00000549660 KLHL34Q8N239 644 aa10.11□□□□□ -0.79
AC087311.2-201ENST00000549660 PKD2Q13563 968 aa10.09□□□□□ -0.79
AC087311.2-201ENST00000549660 PLCD3Q8N3E9 789 aa10.08□□□□□ -0.8
AC087311.2-201ENST00000549660 MIER1Q8N108 512 aa10.07□□□□□ -0.8
AC087311.2-201ENST00000549660 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
AC087311.2-201ENST00000549660 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
AC087311.2-201ENST00000549660 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
AC087311.2-201ENST00000549660 AKT1S1Q96B36 256 aa9.93□□□□□ -0.82
AC087311.2-201ENST00000549660 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
AC087311.2-201ENST00000549660 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
AC087311.2-201ENST00000549660 SPDYE1Q8NFV5 336 aaPredicted RBP9.89□□□□□ -0.83
AC087311.2-201ENST00000549660 REM2Q8IYK8 340 aaPredicted RBP9.88□□□□□ -0.83
AC087311.2-201ENST00000549660 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
AC087311.2-201ENST00000549660 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
AC087311.2-201ENST00000549660 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
AC087311.2-201ENST00000549660 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
AC087311.2-201ENST00000549660 RGL2O15211 777 aa9.85□□□□□ -0.83
AC087311.2-201ENST00000549660 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
AC087311.2-201ENST00000549660 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
AC087311.2-201ENST00000549660 CREBZFQ9NS37 354 aa9.81□□□□□ -0.84
AC087311.2-201ENST00000549660 NUBP1P53384 320 aa9.78□□□□□ -0.84
AC087311.2-201ENST00000549660 MNX1P50219 401 aaPredicted RBP9.76□□□□□ -0.85
AC087311.2-201ENST00000549660 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
AC087311.2-201ENST00000549660 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
AC087311.2-201ENST00000549660 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
AC087311.2-201ENST00000549660 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
AC087311.2-201ENST00000549660 GSE1Q14687 1217 aa9.72□□□□□ -0.85
AC087311.2-201ENST00000549660 TRIM41Q8WV44 630 aa9.7□□□□□ -0.86
AC087311.2-201ENST00000549660 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.69□□□□□ -0.86
AC087311.2-201ENST00000549660 CHGAP10645 457 aaKnown RBP9.68□□□□□ -0.86
AC087311.2-201ENST00000549660 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
AC087311.2-201ENST00000549660 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms