RNA–Protein interactions for RNA: ENST00000549408.1

ARPC3-209, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 5

Gene ARPC3, Length 209 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-209ENST00000549408 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
ARPC3-209ENST00000549408 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
ARPC3-209ENST00000549408 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
ARPC3-209ENST00000549408 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
ARPC3-209ENST00000549408 FOXD1Q16676 465 aa18.01■□□□□ 0.47
ARPC3-209ENST00000549408 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
ARPC3-209ENST00000549408 ADRA2BP18089 450 aa17.03■□□□□ 0.32
ARPC3-209ENST00000549408 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
ARPC3-209ENST00000549408 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
ARPC3-209ENST00000549408 MSH5O43196 834 aa16.83■□□□□ 0.28
ARPC3-209ENST00000549408 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
ARPC3-209ENST00000549408 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
ARPC3-209ENST00000549408 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
ARPC3-209ENST00000549408 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
ARPC3-209ENST00000549408 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
ARPC3-209ENST00000549408 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
ARPC3-209ENST00000549408 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
ARPC3-209ENST00000549408 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
ARPC3-209ENST00000549408 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
ARPC3-209ENST00000549408 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
ARPC3-209ENST00000549408 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
ARPC3-209ENST00000549408 KCNA4P22459 653 aa14.75□□□□□ -0.05
ARPC3-209ENST00000549408 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
ARPC3-209ENST00000549408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.123e-11■■□□□ 11.4
ARPC3-209ENST00000549408 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
ARPC3-209ENST00000549408 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
ARPC3-209ENST00000549408 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
ARPC3-209ENST00000549408 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
ARPC3-209ENST00000549408 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
ARPC3-209ENST00000549408 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
ARPC3-209ENST00000549408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
ARPC3-209ENST00000549408 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
ARPC3-209ENST00000549408 APLP2Q06481 763 aa13.79□□□□□ -0.2
ARPC3-209ENST00000549408 CAPN15O75808 1086 aa13.72□□□□□ -0.21
ARPC3-209ENST00000549408 MYCNP04198 464 aaPredicted RBP13.72□□□□□ -0.21
ARPC3-209ENST00000549408 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
ARPC3-209ENST00000549408 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
ARPC3-209ENST00000549408 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
ARPC3-209ENST00000549408 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
ARPC3-209ENST00000549408 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
ARPC3-209ENST00000549408 ZBTB22O15209 634 aa13.51□□□□□ -0.25
ARPC3-209ENST00000549408 DSG3P32926 999 aa13.51□□□□□ -0.25
ARPC3-209ENST00000549408 ABCB7O75027 752 aa13.38□□□□□ -0.27
ARPC3-209ENST00000549408 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
ARPC3-209ENST00000549408 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
ARPC3-209ENST00000549408 POLA2Q14181 598 aa13.26□□□□□ -0.29
ARPC3-209ENST00000549408 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
ARPC3-209ENST00000549408 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
ARPC3-209ENST00000549408 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
ARPC3-209ENST00000549408 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
ARPC3-209ENST00000549408 FBLN2P98095 1184 aa12.88□□□□□ -0.35
ARPC3-209ENST00000549408 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
ARPC3-209ENST00000549408 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
ARPC3-209ENST00000549408 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
ARPC3-209ENST00000549408 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
ARPC3-209ENST00000549408 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
ARPC3-209ENST00000549408 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
ARPC3-209ENST00000549408 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
ARPC3-209ENST00000549408 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
ARPC3-209ENST00000549408 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
ARPC3-209ENST00000549408 POTEHQ6S545 545 aa12.5□□□□□ -0.41
ARPC3-209ENST00000549408 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
ARPC3-209ENST00000549408 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
ARPC3-209ENST00000549408 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
ARPC3-209ENST00000549408 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
ARPC3-209ENST00000549408 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
ARPC3-209ENST00000549408 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
ARPC3-209ENST00000549408 PIP4P2Q8N4L2 257 aa12.26□□□□□ -0.45
ARPC3-209ENST00000549408 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
ARPC3-209ENST00000549408 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
ARPC3-209ENST00000549408 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
ARPC3-209ENST00000549408 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
ARPC3-209ENST00000549408 HAX1O00165 279 aa12.01□□□□□ -0.49
ARPC3-209ENST00000549408 FKBP8Q14318 412 aa12.01□□□□□ -0.49
ARPC3-209ENST00000549408 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
ARPC3-209ENST00000549408 PROM2Q8N271 834 aa12.01□□□□□ -0.49
ARPC3-209ENST00000549408 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
ARPC3-209ENST00000549408 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
ARPC3-209ENST00000549408 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
ARPC3-209ENST00000549408 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
ARPC3-209ENST00000549408 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
ARPC3-209ENST00000549408 NPM1P06748 294 aaKnown RBP eCLIP11.79□□□□□ -0.52
ARPC3-209ENST00000549408 EVX2Q03828 476 aa11.77□□□□□ -0.53
ARPC3-209ENST00000549408 MIER1Q8N108 512 aa11.76□□□□□ -0.53
ARPC3-209ENST00000549408 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
ARPC3-209ENST00000549408 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
ARPC3-209ENST00000549408 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
ARPC3-209ENST00000549408 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
ARPC3-209ENST00000549408 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
ARPC3-209ENST00000549408 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
ARPC3-209ENST00000549408 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
ARPC3-209ENST00000549408 CLCN6P51797 869 aa11.63□□□□□ -0.55
ARPC3-209ENST00000549408 GABBR2O75899 941 aa11.6□□□□□ -0.55
ARPC3-209ENST00000549408 ZNF579Q8NAF0 562 aaKnown RBP11.57□□□□□ -0.56
ARPC3-209ENST00000549408 VASPP50552 380 aaPredicted RBP11.52□□□□□ -0.57
ARPC3-209ENST00000549408 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
ARPC3-209ENST00000549408 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
ARPC3-209ENST00000549408 RASEFQ8IZ41 740 aa11.45□□□□□ -0.58
ARPC3-209ENST00000549408 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
ARPC3-209ENST00000549408 NUBP1P53384 320 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms