RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
USP25-210ENST00000549362 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
USP25-210ENST00000549362 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
USP25-210ENST00000549362 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
USP25-210ENST00000549362 FOXD1Q16676 465 aa16.62■□□□□ 0.25
USP25-210ENST00000549362 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
USP25-210ENST00000549362 MSH5O43196 834 aa15.95■□□□□ 0.14
USP25-210ENST00000549362 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
USP25-210ENST00000549362 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
USP25-210ENST00000549362 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.01
USP25-210ENST00000549362 ADRA2BP18089 450 aa14.92□□□□□ -0.02
USP25-210ENST00000549362 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
USP25-210ENST00000549362 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
USP25-210ENST00000549362 MAPK8IP2Q13387 824 aaPredicted RBP13.87□□□□□ -0.19
USP25-210ENST00000549362 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
USP25-210ENST00000549362 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
USP25-210ENST00000549362 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
USP25-210ENST00000549362 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
USP25-210ENST00000549362 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
USP25-210ENST00000549362 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
USP25-210ENST00000549362 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
USP25-210ENST00000549362 PPP4R3CPQ6ZMV5 832 aa12.99□□□□□ -0.33
USP25-210ENST00000549362 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
USP25-210ENST00000549362 POTEHQ6S545 545 aa12.91□□□□□ -0.34
USP25-210ENST00000549362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP25-210ENST00000549362 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
USP25-210ENST00000549362 DSG3P32926 999 aa12.38□□□□□ -0.43
USP25-210ENST00000549362 CAPN15O75808 1086 aa12.35□□□□□ -0.43
USP25-210ENST00000549362 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
USP25-210ENST00000549362 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
USP25-210ENST00000549362 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
USP25-210ENST00000549362 APLP2Q06481 763 aa12.06□□□□□ -0.48
USP25-210ENST00000549362 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
USP25-210ENST00000549362 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
USP25-210ENST00000549362 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
USP25-210ENST00000549362 ABCB7O75027 752 aa11.93□□□□□ -0.5
USP25-210ENST00000549362 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
USP25-210ENST00000549362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.84□□□□□ -0.51
USP25-210ENST00000549362 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
USP25-210ENST00000549362 SP7Q8TDD2 431 aaPredicted RBP11.8□□□□□ -0.52
USP25-210ENST00000549362 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
USP25-210ENST00000549362 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
USP25-210ENST00000549362 AKT1S1Q96B36 256 aa11.49□□□□□ -0.57
USP25-210ENST00000549362 POLA2Q14181 598 aa11.48□□□□□ -0.57
USP25-210ENST00000549362 HAX1O00165 279 aa11.45□□□□□ -0.58
USP25-210ENST00000549362 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
USP25-210ENST00000549362 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
USP25-210ENST00000549362 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
USP25-210ENST00000549362 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
USP25-210ENST00000549362 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP25-210ENST00000549362 KCNA4P22459 653 aa11.22□□□□□ -0.61
USP25-210ENST00000549362 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
USP25-210ENST00000549362 OSCARQ8IYS5 282 aa11.12□□□□□ -0.63
USP25-210ENST00000549362 EVX2Q03828 476 aa11.1□□□□□ -0.63
USP25-210ENST00000549362 LHX8Q68G74 356 aa11.05□□□□□ -0.64
USP25-210ENST00000549362 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
USP25-210ENST00000549362 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
USP25-210ENST00000549362 PLSCR2Q9NRY7 297 aa10.92□□□□□ -0.66
USP25-210ENST00000549362 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
USP25-210ENST00000549362 GABBR2O75899 941 aa10.91□□□□□ -0.66
USP25-210ENST00000549362 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
USP25-210ENST00000549362 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
USP25-210ENST00000549362 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
USP25-210ENST00000549362 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
USP25-210ENST00000549362 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
USP25-210ENST00000549362 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
USP25-210ENST00000549362 SLC4A1APQ9BWU0 796 aaKnown RBP10.8□□□□□ -0.68
USP25-210ENST00000549362 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.69
USP25-210ENST00000549362 FBLN2P98095 1184 aa10.73□□□□□ -0.69
USP25-210ENST00000549362 CLCN6P51797 869 aa10.69□□□□□ -0.7
USP25-210ENST00000549362 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
USP25-210ENST00000549362 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
USP25-210ENST00000549362 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
USP25-210ENST00000549362 POTEIP0CG38 1075 aa10.59□□□□□ -0.71
USP25-210ENST00000549362 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
USP25-210ENST00000549362 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
USP25-210ENST00000549362 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
USP25-210ENST00000549362 CD44P16070 742 aaKnown RBP10.56□□□□□ -0.72
USP25-210ENST00000549362 ATXN8OSP0DMR3 200 aa10.55□□□□□ -0.72
USP25-210ENST00000549362 POTEMA6NI47 508 aa10.45□□□□□ -0.74
USP25-210ENST00000549362 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
USP25-210ENST00000549362 PCDH10Q9P2E7 1040 aa10.43□□□□□ -0.74
USP25-210ENST00000549362 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP25-210ENST00000549362 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
USP25-210ENST00000549362 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
USP25-210ENST00000549362 OTUD5Q96G74 571 aa10.38□□□□□ -0.75
USP25-210ENST00000549362 ZNF579Q8NAF0 562 aaKnown RBP10.36□□□□□ -0.75
USP25-210ENST00000549362 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
USP25-210ENST00000549362 ZBTB22O15209 634 aa10.27□□□□□ -0.77
USP25-210ENST00000549362 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
USP25-210ENST00000549362 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
USP25-210ENST00000549362 PAK3O75914 559 aaPredicted RBP10.19□□□□□ -0.78
USP25-210ENST00000549362 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
USP25-210ENST00000549362 STAG3Q9UJ98 1225 aa10.08□□□□□ -0.8
USP25-210ENST00000549362 C7P10643 843 aa10.07□□□□□ -0.8
USP25-210ENST00000549362 SLC39A7Q92504 469 aa10.07□□□□□ -0.8
USP25-210ENST00000549362 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
USP25-210ENST00000549362 CREBZFQ9NS37 354 aa10.06□□□□□ -0.8
USP25-210ENST00000549362 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
USP25-210ENST00000549362 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 512.8 ms